Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026246

Identifier: 54026246

GI number: 54026246

Start: 4427512

End: 4428333

Strand: Reverse

Name: 54026246

Synonym: nfa42750

Alternate gene names: NA

Gene position: 4428333-4427512 (Counterclockwise)

Preceding gene: 54026247

Following gene: 54026245

Centisome position: 73.55

GC content: 71.65

Gene sequence:

>822_bases
ATGACTATTTCGTCCGTGTTGACGGCCCCGGCTCGACCGACGGAATCCGGGGGGCAGCGGTACGCGTTGGTGGTCGCCTC
CGACGCCGAGCACCGCGAGGCGGCGCAGCGCCTGCGCTACCGAGTGTTCGCCGACGAACCCGGCTTCCGGATCCCCGACA
CCGGCACCGGGCTCGACGCCGATCGGTTCGACGAGCACTGCGATCACCTGCTCGTCCGGGACGAGCGGACCGGGGCGTTC
GTCGGCTGCTACCGGATGCTCCCGCCGGACAAGGCTGCCGGGGCGGGCGGGTACTACACGGCCACGGAATTCGACCTGAC
CCGGCTCGACCCGCACGGGCGCCGGATCGTGGAGATGGGCCGCGCCTGCGTGGTGCCCGAGCACCGCAACGGTTCGGTGC
TCACCCTCATGTGGGCGGGCATCCTGCACTACATCCAGCTCACCGGCTACGACTGGGTGATGGGCTGCGTGTCGGTGCCC
ATGCAGAACAGCCCCACCGATCTCGCGGGTGTGAACGTGCGCGGCGTGCGAGACCTGCTGCTGAGCAAGCACGCCTGCGA
GCCGCGGCACCGCGTCCGCCCGTACCACCCGGTGGTGGTCGACGGGCGCGGCCTCGACGACCTGACCCCGCCCGCCCGGC
CCACGCTGCCGCCACTGCTGCGCGGCTACCTGCGCCTGGGCGCGCAGATCTGCGGTGAGCCCGCGCACGACCCGGATTTC
GCGGTCGCCGACTTCGTCGCCCTGCTCGGGCTGGACACCATCAACACCCGCTACCTGGAACGCTTGCAGGGCGCCGCGAC
GGCCTTCGACGGGGGACGGTGA

Upstream 100 bases:

>100_bases
GTGAACGCCCGGTGTGACCGGCGTCTCGTTCACCGAACCGGCATTCCGCCGACACTTCGAGGTCGCTCCGGCGCAGTCTG
GGGCTGGCTTCATCACGGAT

Downstream 100 bases:

>100_bases
GGACCGTGGTGTTCGACGCGCCGTTGGCGAAGGACGCACACAGCTGGATGCCGTCGAGCCCGTGCGGGCCCGCCTGCATC
GAGCGCACCGACGAGGTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Hemolysin; Hemolysin-Like Protein; Ornithine-Acyl(Acyl Carrier Protein) N-Acyltransferase; Phospholipid/Glycerol Acyltransferase; Ornithine-Acyl(Acyl Carrier Protein) N- Acyltransferase; Phosphohistidine Phosphatase SixA; Acyltransferase Domain Protein; Hemolysin Protein; Acyl-CoA N-Acyltransferases Superfamily Protein; Ornithine-Acyl N-Acyltransferase

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MTISSVLTAPARPTESGGQRYALVVASDAEHREAAQRLRYRVFADEPGFRIPDTGTGLDADRFDEHCDHLLVRDERTGAF
VGCYRMLPPDKAAGAGGYYTATEFDLTRLDPHGRRIVEMGRACVVPEHRNGSVLTLMWAGILHYIQLTGYDWVMGCVSVP
MQNSPTDLAGVNVRGVRDLLLSKHACEPRHRVRPYHPVVVDGRGLDDLTPPARPTLPPLLRGYLRLGAQICGEPAHDPDF
AVADFVALLGLDTINTRYLERLQGAATAFDGGR

Sequences:

>Translated_273_residues
MTISSVLTAPARPTESGGQRYALVVASDAEHREAAQRLRYRVFADEPGFRIPDTGTGLDADRFDEHCDHLLVRDERTGAF
VGCYRMLPPDKAAGAGGYYTATEFDLTRLDPHGRRIVEMGRACVVPEHRNGSVLTLMWAGILHYIQLTGYDWVMGCVSVP
MQNSPTDLAGVNVRGVRDLLLSKHACEPRHRVRPYHPVVVDGRGLDDLTPPARPTLPPLLRGYLRLGAQICGEPAHDPDF
AVADFVALLGLDTINTRYLERLQGAATAFDGGR
>Mature_272_residues
TISSVLTAPARPTESGGQRYALVVASDAEHREAAQRLRYRVFADEPGFRIPDTGTGLDADRFDEHCDHLLVRDERTGAFV
GCYRMLPPDKAAGAGGYYTATEFDLTRLDPHGRRIVEMGRACVVPEHRNGSVLTLMWAGILHYIQLTGYDWVMGCVSVPM
QNSPTDLAGVNVRGVRDLLLSKHACEPRHRVRPYHPVVVDGRGLDDLTPPARPTLPPLLRGYLRLGAQICGEPAHDPDFA
VADFVALLGLDTINTRYLERLQGAATAFDGGR

Specific function: Unknown

COG id: COG3176

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29985; Mature: 29854

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISSVLTAPARPTESGGQRYALVVASDAEHREAAQRLRYRVFADEPGFRIPDTGTGLDA
CCCHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCH
DRFDEHCDHLLVRDERTGAFVGCYRMLPPDKAAGAGGYYTATEFDLTRLDPHGRRIVEMG
HHHHHHHHHEEEECCCCCCEEEEEECCCCCCCCCCCCCEEECCCEEEEECCCHHHHHHCC
RACVVPEHRNGSVLTLMWAGILHYIQLTGYDWVMGCVSVPMQNSPTDLAGVNVRGVRDLL
CEEECCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
LSKHACEPRHRVRPYHPVVVDGRGLDDLTPPARPTLPPLLRGYLRLGAQICGEPAHDPDF
HHHHCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCH
AVADFVALLGLDTINTRYLERLQGAATAFDGGR
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TISSVLTAPARPTESGGQRYALVVASDAEHREAAQRLRYRVFADEPGFRIPDTGTGLDA
CCHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCH
DRFDEHCDHLLVRDERTGAFVGCYRMLPPDKAAGAGGYYTATEFDLTRLDPHGRRIVEMG
HHHHHHHHHEEEECCCCCCEEEEEECCCCCCCCCCCCCEEECCCEEEEECCCHHHHHHCC
RACVVPEHRNGSVLTLMWAGILHYIQLTGYDWVMGCVSVPMQNSPTDLAGVNVRGVRDLL
CEEECCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
LSKHACEPRHRVRPYHPVVVDGRGLDDLTPPARPTLPPLLRGYLRLGAQICGEPAHDPDF
HHHHCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCH
AVADFVALLGLDTINTRYLERLQGAATAFDGGR
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA