Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026158

Identifier: 54026158

GI number: 54026158

Start: 4334610

End: 4335362

Strand: Reverse

Name: 54026158

Synonym: nfa41870

Alternate gene names: NA

Gene position: 4335362-4334610 (Counterclockwise)

Preceding gene: 54026160

Following gene: 54026157

Centisome position: 72.0

GC content: 72.64

Gene sequence:

>753_bases
GTGAGCATGTATCGGGTTTTCGAGGCGCTCGACGAGCTGGTGGCGATCGTCGAGGAGGCGCGCGGCATCCCGCCGACCCG
CAGCTGCATCGTGCCCCGCGGCGACGTGCTCGACCTGCTCGACGATGTGCGTGACGCGCTGCCCGGCGAACTCGACGACG
CCCAGGACGTGCTCGATCACCGGGACAAGATCGTCTCCGATGCCCGCACGGCCGCCGAGACCACCGTCACCTCGGCCGAC
GAGCAGGCCCGCGACACCATCGACTCCGCTCGCGAGGAGGCCGACCGCATCCTGGCCGACGCCAAGGCGCACGCCGATCG
CATGGTCGCCGAGGCGAGCGCGCACGCCGACCACCTGGTCACCACCGCCCAGGCCGAGGCCGAGCGGATCGTGGCCGAGG
CCAAGGCCGAGTACGAAACCGTCACCGGCCGGGCGCGCGCCGAGGCGGACCGGATGATCGAGTCCGGCAAGGCCTCCTAC
GAGCGGTCGGTGGCCGAGGGCGAGGCCGAACAGGCCCGCCTGGTCGCCCAGACCGAGGTGGTGCGGGCCGCGCACGCGGA
GTCCGCGCGGATCATCGACACCGCGCAGGCCGAGGCGGACCGGATGCGCGACGAGTGCGACCACTACGTCGACTCGACGC
TGGCGCAGTTCGAGGAGACCCTCAACAGCACGCTGCGCACCGTCGGCCGCGGCAGGCACCAGCTGCGCAGCGGTGCGGGC
GCCCCGGACTACGCCACCGACTACCGTCGCTGA

Upstream 100 bases:

>100_bases
CCGGACCGAGACTCGGCAGAACCGGTGACGAGGGGCACACTGGGCCACGGGCGCGCGTGTCCGCGACGGGGTACTCCGCG
ACAGGAACGACTAGAGGTTG

Downstream 100 bases:

>100_bases
TCTCACCCCGGCCGCAGGTCGGCGGCGTTCGCTCCGCCCGCGGCCACCGCGGCGATTTTTGGCAGACCGCGGCGCCCGGC
GTATTGTGGAGTGGTTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSMYRVFEALDELVAIVEEARGIPPTRSCIVPRGDVLDLLDDVRDALPGELDDAQDVLDHRDKIVSDARTAAETTVTSAD
EQARDTIDSAREEADRILADAKAHADRMVAEASAHADHLVTTAQAEAERIVAEAKAEYETVTGRARAEADRMIESGKASY
ERSVAEGEAEQARLVAQTEVVRAAHAESARIIDTAQAEADRMRDECDHYVDSTLAQFEETLNSTLRTVGRGRHQLRSGAG
APDYATDYRR

Sequences:

>Translated_250_residues
MSMYRVFEALDELVAIVEEARGIPPTRSCIVPRGDVLDLLDDVRDALPGELDDAQDVLDHRDKIVSDARTAAETTVTSAD
EQARDTIDSAREEADRILADAKAHADRMVAEASAHADHLVTTAQAEAERIVAEAKAEYETVTGRARAEADRMIESGKASY
ERSVAEGEAEQARLVAQTEVVRAAHAESARIIDTAQAEADRMRDECDHYVDSTLAQFEETLNSTLRTVGRGRHQLRSGAG
APDYATDYRR
>Mature_249_residues
SMYRVFEALDELVAIVEEARGIPPTRSCIVPRGDVLDLLDDVRDALPGELDDAQDVLDHRDKIVSDARTAAETTVTSADE
QARDTIDSAREEADRILADAKAHADRMVAEASAHADHLVTTAQAEAERIVAEAKAEYETVTGRARAEADRMIESGKASYE
RSVAEGEAEQARLVAQTEVVRAAHAESARIIDTAQAEADRMRDECDHYVDSTLAQFEETLNSTLRTVGRGRHQLRSGAGA
PDYATDYRR

Specific function: Unknown

COG id: COG3599

COG function: function code D; Cell division initiation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2927c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27394; Mature: 27263

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMYRVFEALDELVAIVEEARGIPPTRSCIVPRGDVLDLLDDVRDALPGELDDAQDVLDH
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
RDKIVSDARTAAETTVTSADEQARDTIDSAREEADRILADAKAHADRMVAEASAHADHLV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTAQAEAERIVAEAKAEYETVTGRARAEADRMIESGKASYERSVAEGEAEQARLVAQTEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
VRAAHAESARIIDTAQAEADRMRDECDHYVDSTLAQFEETLNSTLRTVGRGRHQLRSGAG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
APDYATDYRR
CCCCCCCCCC
>Mature Secondary Structure 
SMYRVFEALDELVAIVEEARGIPPTRSCIVPRGDVLDLLDDVRDALPGELDDAQDVLDH
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
RDKIVSDARTAAETTVTSADEQARDTIDSAREEADRILADAKAHADRMVAEASAHADHLV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTAQAEAERIVAEAKAEYETVTGRARAEADRMIESGKASYERSVAEGEAEQARLVAQTEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
VRAAHAESARIIDTAQAEADRMRDECDHYVDSTLAQFEETLNSTLRTVGRGRHQLRSGAG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
APDYATDYRR
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]