Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026088

Identifier: 54026088

GI number: 54026088

Start: 4266079

End: 4266942

Strand: Reverse

Name: 54026088

Synonym: nfa41170

Alternate gene names: NA

Gene position: 4266942-4266079 (Counterclockwise)

Preceding gene: 54026089

Following gene: 54026087

Centisome position: 70.87

GC content: 73.5

Gene sequence:

>864_bases
GTGCGGAGTCTGCGGGAGCCGACGCGTCGGGCGAAATACGTTGCCGCGCGTCCGCTGACGAACCGGGACCTGGCCCAGGT
TCTGCGGGTGCTCGACACGGACCCGGTGGCCTCGTGCATGGTGGTCGCGCGGCTGCAGGAGTTCGGGTTGGACGCCCGCG
GCGCCCAGGGCGAACTGTGGACCCGGGAGGGCCCGGCGGAGTCGTTGTGCTTCTCCGGGGCGAATCTGGTGCCGTTGCGC
GGCGACCACGAGGCACTGCGCGCCTTCGCCGACCGTGCCGCCCGGTGGCCGCGGATGTGTTCGTCCCTGGTCGGCCGCCA
GGAACTGGCCTTGCCGCTGTGGGAGATGCTGAGCGAGCGGTGGGGTCCGCCGCGGGAACTGCGCGGCACGCAGCCGCTGC
TGGCGCTCGCCCATCCGGCGCTCTACGACCCCGACGCCGAGGTGCGCCGGGCCCGCCCCGACGAACTCGACCGCTACCTC
GAGGCCGCGATCGCGATGTTCATCGAGGAAGTGGGTGTCGATCCGCGGGCGGGCGACGGCGGCCGCGCCTATCGCAGGCG
GATCCAGAGCCTGATCGAATCCGGTCGCGCCTGGGCGCGGTTCGAGGACGGGCGGGTGGTGTACAAGGCCGAGATCGGGT
CGCTGTCCCGGCGGACCGGCCAGATCCAGGGGGTCTGGGTGCATCCGGACCGGCGCGGGCGCGGGCTCGGCACGGCGGGC
ACGGCGGCGGTCGCGAACGCGGTGGTCGCCTCCGGCCGCACGGCCAGCCTCTACGTCAACGATTTCAACACCGTCGCCCG
CCGCGCCTACGGCCGGGTCGGGTTCCGGCAGGTGGCGACCTTCGCCACCGTCCTGCTCGACTGA

Upstream 100 bases:

>100_bases
GCGAGCAGGCCGGCTCCGGCGAGCCGGTCGTCACCGTGAGCTGACCTGGTCTTTCCCACGAGTTGTACCGCGTCGGTCCG
GTTCGTGGCAGGCTGTCGGT

Downstream 100 bases:

>100_bases
ACGCGCGCCCCGCGGCGCGAGATTCGGTGCGCCGCAGGAGTTTGCCGTTCGGTGGCCAGTACCATCGGCAGCGATGTCGA
CGCGCATACTGATCCCGGTC

Product: putative acetyltransferase

Products: NA

Alternate protein names: Acetyltransferase; Acyltransferase; GNAT Family Acetyltransferase; GCN5 N-Acetyltransferase; Acetyltransferase Family Protein; Gnat Acetyltransferase; Acetyltransferase GNAT Family Protein; GCN5-Like N-Acetyltransferase; GCN5-Related Protein N-Acetyltransferase; Acetyltransferase-Like Protein

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MRSLREPTRRAKYVAARPLTNRDLAQVLRVLDTDPVASCMVVARLQEFGLDARGAQGELWTREGPAESLCFSGANLVPLR
GDHEALRAFADRAARWPRMCSSLVGRQELALPLWEMLSERWGPPRELRGTQPLLALAHPALYDPDAEVRRARPDELDRYL
EAAIAMFIEEVGVDPRAGDGGRAYRRRIQSLIESGRAWARFEDGRVVYKAEIGSLSRRTGQIQGVWVHPDRRGRGLGTAG
TAAVANAVVASGRTASLYVNDFNTVARRAYGRVGFRQVATFATVLLD

Sequences:

>Translated_287_residues
MRSLREPTRRAKYVAARPLTNRDLAQVLRVLDTDPVASCMVVARLQEFGLDARGAQGELWTREGPAESLCFSGANLVPLR
GDHEALRAFADRAARWPRMCSSLVGRQELALPLWEMLSERWGPPRELRGTQPLLALAHPALYDPDAEVRRARPDELDRYL
EAAIAMFIEEVGVDPRAGDGGRAYRRRIQSLIESGRAWARFEDGRVVYKAEIGSLSRRTGQIQGVWVHPDRRGRGLGTAG
TAAVANAVVASGRTASLYVNDFNTVARRAYGRVGFRQVATFATVLLD
>Mature_287_residues
MRSLREPTRRAKYVAARPLTNRDLAQVLRVLDTDPVASCMVVARLQEFGLDARGAQGELWTREGPAESLCFSGANLVPLR
GDHEALRAFADRAARWPRMCSSLVGRQELALPLWEMLSERWGPPRELRGTQPLLALAHPALYDPDAEVRRARPDELDRYL
EAAIAMFIEEVGVDPRAGDGGRAYRRRIQSLIESGRAWARFEDGRVVYKAEIGSLSRRTGQIQGVWVHPDRRGRGLGTAG
TAAVANAVVASGRTASLYVNDFNTVARRAYGRVGFRQVATFATVLLD

Specific function: Unknown

COG id: COG3393

COG function: function code R; Predicted acetyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31807; Mature: 31807

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLREPTRRAKYVAARPLTNRDLAQVLRVLDTDPVASCMVVARLQEFGLDARGAQGELW
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
TREGPAESLCFSGANLVPLRGDHEALRAFADRAARWPRMCSSLVGRQELALPLWEMLSER
CCCCCHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
WGPPRELRGTQPLLALAHPALYDPDAEVRRARPDELDRYLEAAIAMFIEEVGVDPRAGDG
CCCCHHCCCCCCHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GRAYRRRIQSLIESGRAWARFEDGRVVYKAEIGSLSRRTGQIQGVWVHPDRRGRGLGTAG
HHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCHHHHHCCCEEEEEECCCCCCCCCCCHH
TAAVANAVVASGRTASLYVNDFNTVARRAYGRVGFRQVATFATVLLD
HHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSLREPTRRAKYVAARPLTNRDLAQVLRVLDTDPVASCMVVARLQEFGLDARGAQGELW
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
TREGPAESLCFSGANLVPLRGDHEALRAFADRAARWPRMCSSLVGRQELALPLWEMLSER
CCCCCHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
WGPPRELRGTQPLLALAHPALYDPDAEVRRARPDELDRYLEAAIAMFIEEVGVDPRAGDG
CCCCHHCCCCCCHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GRAYRRRIQSLIESGRAWARFEDGRVVYKAEIGSLSRRTGQIQGVWVHPDRRGRGLGTAG
HHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCHHHHHCCCEEEEEECCCCCCCCCCCHH
TAAVANAVVASGRTASLYVNDFNTVARRAYGRVGFRQVATFATVLLD
HHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA