Click here to switch to the map view.

The map label for this gene is 54026077

Identifier: 54026077

GI number: 54026077

Start: 4256212

End: 4256466

Strand: Reverse

Name: 54026077

Synonym: nfa41060

Alternate gene names: NA

Gene position: 4256466-4256212 (Counterclockwise)

Preceding gene: 54026078

Following gene: 54026076

Centisome position: 70.69

GC content: 67.45

Gene sequence:

>255_bases
ATGTCGTGCGAGTCGCTCGCGGCTTCCGGCCGGATGACCACGGTTTTCGGCAGGCCCGCCCGCGCGGTGCCGCGCATGGA
TCCGAACGCACTATTGCGTTCGGCGTTGCGTTCTTGCATCTGCACGCGCATGATCCAGCTAGCCGGTGTCGCCGCTCCAG
CGGCGGCGGCGCCCGGAACGCCGGACAATCGAATCGAGAAGCCGATCATGCCGAGATTTGCGATGACCGTGGCGGATGCG
GGGGCGCGGGGATGA

Upstream 100 bases:

>100_bases
GGCGGTGGCCGCCGCCCGCCTGCACACCGCCCTGCGCGGCTGATCCATCGTCCACAGCACCGACCCGCGCTGGAAAGCCC
TCTTACACATACCCTTCGGC

Downstream 100 bases:

>100_bases
GCGCACCGACGATAGGGGTGCTGCCGACGGCGCCACAGCTGCTGAGCGCCTTCCAGGGCAGGCGGTTCGAGGATCGGGAG
CTGTTGCGCTCCGCGCACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MSCESLAASGRMTTVFGRPARAVPRMDPNALLRSALRSCICTRMIQLAGVAAPAAAAPGTPDNRIEKPIMPRFAMTVADA
GARG

Sequences:

>Translated_84_residues
MSCESLAASGRMTTVFGRPARAVPRMDPNALLRSALRSCICTRMIQLAGVAAPAAAAPGTPDNRIEKPIMPRFAMTVADA
GARG
>Mature_83_residues
SCESLAASGRMTTVFGRPARAVPRMDPNALLRSALRSCICTRMIQLAGVAAPAAAAPGTPDNRIEKPIMPRFAMTVADAG
ARG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8742; Mature: 8611

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCESLAASGRMTTVFGRPARAVPRMDPNALLRSALRSCICTRMIQLAGVAAPAAAAPGT
CCCCHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDNRIEKPIMPRFAMTVADAGARG
CCCCCCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
SCESLAASGRMTTVFGRPARAVPRMDPNALLRSALRSCICTRMIQLAGVAAPAAAAPGT
CCCHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDNRIEKPIMPRFAMTVADAGARG
CCCCCCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA