Click here to switch to the map view.

The map label for this gene is 54026076

Identifier: 54026076

GI number: 54026076

Start: 4255772

End: 4256215

Strand: Reverse

Name: 54026076

Synonym: nfa41050

Alternate gene names: NA

Gene position: 4256215-4255772 (Counterclockwise)

Preceding gene: 54026077

Following gene: 54026074

Centisome position: 70.69

GC content: 70.05

Gene sequence:

>444_bases
ATGAGCGCACCGACGATAGGGGTGCTGCCGACGGCGCCACAGCTGCTGAGCGCCTTCCAGGGCAGGCGGTTCGAGGATCG
GGAGCTGTTGCGCTCCGCGCACGCCCTCGCCGAGCTGCACGCGCGCCGCGCCCAACTGGCCGACGCCCACCTGCTCGCCG
AAATCGACTGCCGTCGTAGCGAACTGGTCGACGACATCGACGAGTGGATCGCACACGAGGTGCCGGTGCACCGGCCCGAC
GCCGCCCTGCACACCGAGAGCCTGGGCGCCGTGGTGGACCGGATGGCGCGTAGCTGGGTCGATGCCAACCAGGCCATCGA
CAGTGCGGGCCCGCGCAGTGACACCACCCATAAACACTGGTATCACCTGGCCGAACTCGTCGACGGCTACACTGATCTGG
TCACCGACGTGGCGGGCGGCCGTCGCCGCCTCCCCGGCCGGTAG

Upstream 100 bases:

>100_bases
CCGCTCCAGCGGCGGCGGCGCCCGGAACGCCGGACAATCGAATCGAGAAGCCGATCATGCCGAGATTTGCGATGACCGTG
GCGGATGCGGGGGCGCGGGG

Downstream 100 bases:

>100_bases
CCCGGGCGACCCGCATCGAGGTCACCGCGCGATCCGCCGGGCCTGCCGCGTCGCAGGCGCAGGGACGGCGGGCGCAACGG
CGCGTCTCGCCCGGCGTACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSAPTIGVLPTAPQLLSAFQGRRFEDRELLRSAHALAELHARRAQLADAHLLAEIDCRRSELVDDIDEWIAHEVPVHRPD
AALHTESLGAVVDRMARSWVDANQAIDSAGPRSDTTHKHWYHLAELVDGYTDLVTDVAGGRRRLPGR

Sequences:

>Translated_147_residues
MSAPTIGVLPTAPQLLSAFQGRRFEDRELLRSAHALAELHARRAQLADAHLLAEIDCRRSELVDDIDEWIAHEVPVHRPD
AALHTESLGAVVDRMARSWVDANQAIDSAGPRSDTTHKHWYHLAELVDGYTDLVTDVAGGRRRLPGR
>Mature_146_residues
SAPTIGVLPTAPQLLSAFQGRRFEDRELLRSAHALAELHARRAQLADAHLLAEIDCRRSELVDDIDEWIAHEVPVHRPDA
ALHTESLGAVVDRMARSWVDANQAIDSAGPRSDTTHKHWYHLAELVDGYTDLVTDVAGGRRRLPGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16338; Mature: 16207

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPTIGVLPTAPQLLSAFQGRRFEDRELLRSAHALAELHARRAQLADAHLLAEIDCRRS
CCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELVDDIDEWIAHEVPVHRPDAALHTESLGAVVDRMARSWVDANQAIDSAGPRSDTTHKHW
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
YHLAELVDGYTDLVTDVAGGRRRLPGR
HHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SAPTIGVLPTAPQLLSAFQGRRFEDRELLRSAHALAELHARRAQLADAHLLAEIDCRRS
CCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELVDDIDEWIAHEVPVHRPDAALHTESLGAVVDRMARSWVDANQAIDSAGPRSDTTHKHW
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
YHLAELVDGYTDLVTDVAGGRRRLPGR
HHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA