Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is elaA [C]

Identifier: 54026055

GI number: 54026055

Start: 4235977

End: 4236426

Strand: Reverse

Name: elaA [C]

Synonym: nfa40840

Alternate gene names: 54026055

Gene position: 4236426-4235977 (Counterclockwise)

Preceding gene: 161598440

Following gene: 54026054

Centisome position: 70.36

GC content: 66.89

Gene sequence:

>450_bases
ATGATGTCGACAGTTGTTCTCAAACGTTCCTGGGCCGCGGATCTCGACACCGCCACCCTGTACCAGCTGTTGAAACTCCG
CGTCGAAGTGTTCGTCGTCGAACAGAAGTGCGCGTACCCGGAGTTGGACGGGCTCGACCTGCTGCCGGAGACCCGCCACT
TCTGGCTCGACGACGAGGGTGAGGTCATCTGCACCCTGCGCCTGCTCGAAGAGCACAACGACGGCGTCAAGTCCTTCCGC
ATCGGCCGCCTCTGCACCGCCCCCGCCGCCCGCGGCCACGGCTACACCACCCGCCTGCTCCAGGCCGCCCTCGCCGAGGC
CGGTTCCGCCACCGTCCGCCTCAACGCCCAGACCTACCTCGTGGACATGTACGCCAAGCACGGCTTCCAGCCCGACGGCG
CGGAATTCGTCGAAGACGGCATCCGCCACGTCCCCATGCGCCGCGGATAG

Upstream 100 bases:

>100_bases
GGCCGGTGACCTGCTCGGAGGCCGGCGACGGCGCGCTGTGCGACCGCGCAGCGCGCCGCAGATGTGGCGGGCAGCGGCCC
CGGTGTGATAGCAAAGCGCG

Downstream 100 bases:

>100_bases
ACCGACTCCGGATCGACCGGCTGCTTCGGCACCGACGGCCGGTGGATCGGCGATCCGGAGACATACCGTCCGCCGCCGCC
GTCGCGGGGGAGCGGCGGCG

Product: putative acyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MMSTVVLKRSWAADLDTATLYQLLKLRVEVFVVEQKCAYPELDGLDLLPETRHFWLDDEGEVICTLRLLEEHNDGVKSFR
IGRLCTAPAARGHGYTTRLLQAALAEAGSATVRLNAQTYLVDMYAKHGFQPDGAEFVEDGIRHVPMRRG

Sequences:

>Translated_149_residues
MMSTVVLKRSWAADLDTATLYQLLKLRVEVFVVEQKCAYPELDGLDLLPETRHFWLDDEGEVICTLRLLEEHNDGVKSFR
IGRLCTAPAARGHGYTTRLLQAALAEAGSATVRLNAQTYLVDMYAKHGFQPDGAEFVEDGIRHVPMRRG
>Mature_149_residues
MMSTVVLKRSWAADLDTATLYQLLKLRVEVFVVEQKCAYPELDGLDLLPETRHFWLDDEGEVICTLRLLEEHNDGVKSFR
IGRLCTAPAARGHGYTTRLLQAALAEAGSATVRLNAQTYLVDMYAKHGFQPDGAEFVEDGIRHVPMRRG

Specific function: Unknown

COG id: COG2153

COG function: function code R; Predicted acyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1788602, Length=142, Percent_Identity=35.9154929577465, Blast_Score=81, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16748; Mature: 16748

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSTVVLKRSWAADLDTATLYQLLKLRVEVFVVEQKCAYPELDGLDLLPETRHFWLDDEG
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCEEEECCCC
EVICTLRLLEEHNDGVKSFRIGRLCTAPAARGHGYTTRLLQAALAEAGSATVRLNAQTYL
CEEEEEEEHHHCCCCHHHEECCCEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHH
VDMYAKHGFQPDGAEFVEDGIRHVPMRRG
EEHHHHCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMSTVVLKRSWAADLDTATLYQLLKLRVEVFVVEQKCAYPELDGLDLLPETRHFWLDDEG
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCEEEECCCC
EVICTLRLLEEHNDGVKSFRIGRLCTAPAARGHGYTTRLLQAALAEAGSATVRLNAQTYL
CEEEEEEEHHHCCCCHHHEECCCEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHH
VDMYAKHGFQPDGAEFVEDGIRHVPMRRG
EEHHHHCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]