| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
Click here to switch to the map view.
The map label for this gene is elaA [C]
Identifier: 54026055
GI number: 54026055
Start: 4235977
End: 4236426
Strand: Reverse
Name: elaA [C]
Synonym: nfa40840
Alternate gene names: 54026055
Gene position: 4236426-4235977 (Counterclockwise)
Preceding gene: 161598440
Following gene: 54026054
Centisome position: 70.36
GC content: 66.89
Gene sequence:
>450_bases ATGATGTCGACAGTTGTTCTCAAACGTTCCTGGGCCGCGGATCTCGACACCGCCACCCTGTACCAGCTGTTGAAACTCCG CGTCGAAGTGTTCGTCGTCGAACAGAAGTGCGCGTACCCGGAGTTGGACGGGCTCGACCTGCTGCCGGAGACCCGCCACT TCTGGCTCGACGACGAGGGTGAGGTCATCTGCACCCTGCGCCTGCTCGAAGAGCACAACGACGGCGTCAAGTCCTTCCGC ATCGGCCGCCTCTGCACCGCCCCCGCCGCCCGCGGCCACGGCTACACCACCCGCCTGCTCCAGGCCGCCCTCGCCGAGGC CGGTTCCGCCACCGTCCGCCTCAACGCCCAGACCTACCTCGTGGACATGTACGCCAAGCACGGCTTCCAGCCCGACGGCG CGGAATTCGTCGAAGACGGCATCCGCCACGTCCCCATGCGCCGCGGATAG
Upstream 100 bases:
>100_bases GGCCGGTGACCTGCTCGGAGGCCGGCGACGGCGCGCTGTGCGACCGCGCAGCGCGCCGCAGATGTGGCGGGCAGCGGCCC CGGTGTGATAGCAAAGCGCG
Downstream 100 bases:
>100_bases ACCGACTCCGGATCGACCGGCTGCTTCGGCACCGACGGCCGGTGGATCGGCGATCCGGAGACATACCGTCCGCCGCCGCC GTCGCGGGGGAGCGGCGGCG
Product: putative acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MMSTVVLKRSWAADLDTATLYQLLKLRVEVFVVEQKCAYPELDGLDLLPETRHFWLDDEGEVICTLRLLEEHNDGVKSFR IGRLCTAPAARGHGYTTRLLQAALAEAGSATVRLNAQTYLVDMYAKHGFQPDGAEFVEDGIRHVPMRRG
Sequences:
>Translated_149_residues MMSTVVLKRSWAADLDTATLYQLLKLRVEVFVVEQKCAYPELDGLDLLPETRHFWLDDEGEVICTLRLLEEHNDGVKSFR IGRLCTAPAARGHGYTTRLLQAALAEAGSATVRLNAQTYLVDMYAKHGFQPDGAEFVEDGIRHVPMRRG >Mature_149_residues MMSTVVLKRSWAADLDTATLYQLLKLRVEVFVVEQKCAYPELDGLDLLPETRHFWLDDEGEVICTLRLLEEHNDGVKSFR IGRLCTAPAARGHGYTTRLLQAALAEAGSATVRLNAQTYLVDMYAKHGFQPDGAEFVEDGIRHVPMRRG
Specific function: Unknown
COG id: COG2153
COG function: function code R; Predicted acyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788602, Length=142, Percent_Identity=35.9154929577465, Blast_Score=81, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16748; Mature: 16748
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSTVVLKRSWAADLDTATLYQLLKLRVEVFVVEQKCAYPELDGLDLLPETRHFWLDDEG CCCCEEEECCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCEEEECCCC EVICTLRLLEEHNDGVKSFRIGRLCTAPAARGHGYTTRLLQAALAEAGSATVRLNAQTYL CEEEEEEEHHHCCCCHHHEECCCEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHH VDMYAKHGFQPDGAEFVEDGIRHVPMRRG EEHHHHCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MMSTVVLKRSWAADLDTATLYQLLKLRVEVFVVEQKCAYPELDGLDLLPETRHFWLDDEG CCCCEEEECCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCEEEECCCC EVICTLRLLEEHNDGVKSFRIGRLCTAPAARGHGYTTRLLQAALAEAGSATVRLNAQTYL CEEEEEEEHHHCCCCHHHEECCCEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHH VDMYAKHGFQPDGAEFVEDGIRHVPMRRG EEHHHHCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]