| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is mqo [H]
Identifier: 161598440
GI number: 161598440
Start: 4236559
End: 4238082
Strand: Reverse
Name: mqo [H]
Synonym: nfa40850
Alternate gene names: 161598440
Gene position: 4238082-4236559 (Counterclockwise)
Preceding gene: 54026058
Following gene: 54026055
Centisome position: 70.39
GC content: 68.31
Gene sequence:
>1524_bases GTGCCGAACGCTGCCAGGACTGAAAAGACCGATGTGGTACTCATCGGTGCCGGAATCATGAGTGCCACCCTCGGCGCGCT GCTCCGCCGGCTCCAGCCGGAGTGGTCGATCTCGTTGTTCGAGCGACTCGACGCCGCCGCCGCCGAGAGCAGCGACCCGT GGAACAACGCGGGCACCGGCCACTCGGCACTGTGCGAGCTCAACTACAGCCCGCAGCGCCCCGACGGCTCGGTGGACGTG AGCAAGGCGATCGACATCAACGAGCGCTTCCAGGTCTCGCGGCAGTTCTGGGCCTACGCGGTGGAGAACGGCATCCTCGG TGATCCGTCCCGCTTCATCAACCCCATCCCGCACGTCAGCTTCGTGCACGGCGCCGACGACGTGCAGTACCTACGCAAGC GCTACGACGCGCTCGCGCCGCACCCGCTGTTCGAGGGCATGGAGTTCATCGACAGCCCCGACGAGTTCAGCCGCAGGCTG CCGCTGATGGCCAAGGGCCGCGACTTCTCCGACCCGATTGCGCTGAACTGGACCGACGGCGGCACCGACATCGACTTCGG TTCGCTCACCAAGGAACTGCTCGCCTACCTCGGCGCCACCGGCGCGGACCTGGCCTTCGGCCACGAGGTGCGCAACCTGT CCAAGGAGTCCGACGGCAGCTGGACGGTCACGGTGCGCAACACCCGCACCCGCCGGACCCGCACCATCTCGGCCAAGTTC GTCTTCGTCGGCGCGGGTGGCGGCGCGCTGCCGCTGCTGCAGAAGTCCGGCATCAAGGAGATCAAGGGCTTCGCCGGGTT CCCGGTCAGCGGCCAGTTCCTGCGCTGCACCAACCCCGAGCTGATCGACAAGCACGAAGCCAAGGTCTACGGCAAGGCCG CCGTGGGCGCGCCGCCGATGTCGGTGCCGCACCTGGACACCCGCGTCATCAACGGCAAGCCCGGCCTGCTGTTCGGCCCC TACGCGGGCTGGACCCCGAAGTTCCTCAAGGACGGCAGCAACGCCGACCTGTTCAAGTCGGTGCGCCCCGGCAACATCGC GCCCATGCTCGGCGTCGGCGTCACCGAGTTGTCGCTGGTGAAGTACCTGGTCTCGGAGCTGCTCAAGTCGCAGGCGGGCA AGGTCTACACGATGGAGGAGTTCATCCCGCGCGCCAACGGCCGCGACTGGGAACTCATCACCGCGGGTCAGCGCGTGCAG ATCATCCGCCGCAAGGGCGTGGGTGGTGTGCTGGAGCTGGGCACCGCCGTCATCGCGGCCCAGGACGGCACCATCGCCGG TCTGCTCGGCGCCTCGCCGGGCGCGTCCACCTGCGTCACCGCCATGCTGGACGTGTTGCAGCGCTGCTTCCCGCGCGAAT ACGCCGACTGGACCCCGCGACTGCGCGAGATGATCCCCTCGCTCGGGGTGAAGCTGTCCGAGGACAAGGCCCTGTTCCAC GAGGTGTGGGACTGGACGACCAAGGCGCTGCACCTGTCGGAGTCGAACACGCCGCAGGCGGCCGGGGTCGGTTCCGCCGT CTGA
Upstream 100 bases:
>100_bases ACGGCGGGTAACCTACCCCCGCCGAGTCACGCCAGGCTCGTTACAACCCAGGCAGGCCACGGTGGCCGCGCCAGACAGTG ACAAGGAAGTCGATCTACCC
Downstream 100 bases:
>100_bases GCCGTCCGAGCCGTCCGAGCCGTCTGCCGGACGGCCGGTGACCTGCTCGGAGGCCGGCGACGGCGCGCTGTGCGACCGCG CAGCGCGCCGCAGATGTGGC
Product: malate:quinone oxidoreductase
Products: NA
Alternate protein names: MQO; Malate dehydrogenase [quinone] [H]
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MPNAARTEKTDVVLIGAGIMSATLGALLRRLQPEWSISLFERLDAAAAESSDPWNNAGTGHSALCELNYSPQRPDGSVDV SKAIDINERFQVSRQFWAYAVENGILGDPSRFINPIPHVSFVHGADDVQYLRKRYDALAPHPLFEGMEFIDSPDEFSRRL PLMAKGRDFSDPIALNWTDGGTDIDFGSLTKELLAYLGATGADLAFGHEVRNLSKESDGSWTVTVRNTRTRRTRTISAKF VFVGAGGGALPLLQKSGIKEIKGFAGFPVSGQFLRCTNPELIDKHEAKVYGKAAVGAPPMSVPHLDTRVINGKPGLLFGP YAGWTPKFLKDGSNADLFKSVRPGNIAPMLGVGVTELSLVKYLVSELLKSQAGKVYTMEEFIPRANGRDWELITAGQRVQ IIRRKGVGGVLELGTAVIAAQDGTIAGLLGASPGASTCVTAMLDVLQRCFPREYADWTPRLREMIPSLGVKLSEDKALFH EVWDWTTKALHLSESNTPQAAGVGSAV
Sequences:
>Translated_507_residues MPNAARTEKTDVVLIGAGIMSATLGALLRRLQPEWSISLFERLDAAAAESSDPWNNAGTGHSALCELNYSPQRPDGSVDV SKAIDINERFQVSRQFWAYAVENGILGDPSRFINPIPHVSFVHGADDVQYLRKRYDALAPHPLFEGMEFIDSPDEFSRRL PLMAKGRDFSDPIALNWTDGGTDIDFGSLTKELLAYLGATGADLAFGHEVRNLSKESDGSWTVTVRNTRTRRTRTISAKF VFVGAGGGALPLLQKSGIKEIKGFAGFPVSGQFLRCTNPELIDKHEAKVYGKAAVGAPPMSVPHLDTRVINGKPGLLFGP YAGWTPKFLKDGSNADLFKSVRPGNIAPMLGVGVTELSLVKYLVSELLKSQAGKVYTMEEFIPRANGRDWELITAGQRVQ IIRRKGVGGVLELGTAVIAAQDGTIAGLLGASPGASTCVTAMLDVLQRCFPREYADWTPRLREMIPSLGVKLSEDKALFH EVWDWTTKALHLSESNTPQAAGVGSAV >Mature_506_residues PNAARTEKTDVVLIGAGIMSATLGALLRRLQPEWSISLFERLDAAAAESSDPWNNAGTGHSALCELNYSPQRPDGSVDVS KAIDINERFQVSRQFWAYAVENGILGDPSRFINPIPHVSFVHGADDVQYLRKRYDALAPHPLFEGMEFIDSPDEFSRRLP LMAKGRDFSDPIALNWTDGGTDIDFGSLTKELLAYLGATGADLAFGHEVRNLSKESDGSWTVTVRNTRTRRTRTISAKFV FVGAGGGALPLLQKSGIKEIKGFAGFPVSGQFLRCTNPELIDKHEAKVYGKAAVGAPPMSVPHLDTRVINGKPGLLFGPY AGWTPKFLKDGSNADLFKSVRPGNIAPMLGVGVTELSLVKYLVSELLKSQAGKVYTMEEFIPRANGRDWELITAGQRVQI IRRKGVGGVLELGTAVIAAQDGTIAGLLGASPGASTCVTAMLDVLQRCFPREYADWTPRLREMIPSLGVKLSEDKALFHE VWDWTTKALHLSESNTPQAAGVGSAV
Specific function: Tricarboxylic acid cycle. [C]
COG id: COG0579
COG function: function code R; Predicted dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MQO family [H]
Homologues:
Organism=Escherichia coli, GI1788539, Length=502, Percent_Identity=50.597609561753, Blast_Score=506, Evalue=1e-144,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006231 [H]
Pfam domain/function: PF06039 Mqo [H]
EC number: =1.1.5.4 [H]
Molecular weight: Translated: 54966; Mature: 54835
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNAARTEKTDVVLIGAGIMSATLGALLRRLQPEWSISLFERLDAAAAESSDPWNNAGTG CCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC HSALCELNYSPQRPDGSVDVSKAIDINERFQVSRQFWAYAVENGILGDPSRFINPIPHVS CCEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEE FVHGADDVQYLRKRYDALAPHPLFEGMEFIDSPDEFSRRLPLMAKGRDFSDPIALNWTDG EECCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCCCEECCCCCCCCEEEEECCC GTDIDFGSLTKELLAYLGATGADLAFGHEVRNLSKESDGSWTVTVRNTRTRRTRTISAKF CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEEE VFVGAGGGALPLLQKSGIKEIKGFAGFPVSGQFLRCTNPELIDKHEAKVYGKAAVGAPPM EEEECCCCCCHHHHHCCHHHHHCCCCCCCCCCEEECCCCHHHCCCHHHEEECCCCCCCCC SVPHLDTRVINGKPGLLFGPYAGWTPKFLKDGSNADLFKSVRPGNIAPMLGVGVTELSLV CCCCCCEEEECCCCCEEECCCCCCCHHHHCCCCCCHHHHCCCCCCCCHHHCCCHHHHHHH KYLVSELLKSQAGKVYTMEEFIPRANGRDWELITAGQRVQIIRRKGVGGVLELGTAVIAA HHHHHHHHHHHCCCEEEHHHHCCCCCCCCEEEEECCCCEEHHHHCCCCCHHHHCCEEEEE QDGTIAGLLGASPGASTCVTAMLDVLQRCFPREYADWTPRLREMIPSLGVKLSEDKALFH CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCEECCCHHHHH EVWDWTTKALHLSESNTPQAAGVGSAV HHHHHHHHEEEECCCCCCCCCCCCCCC >Mature Secondary Structure PNAARTEKTDVVLIGAGIMSATLGALLRRLQPEWSISLFERLDAAAAESSDPWNNAGTG CCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC HSALCELNYSPQRPDGSVDVSKAIDINERFQVSRQFWAYAVENGILGDPSRFINPIPHVS CCEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEE FVHGADDVQYLRKRYDALAPHPLFEGMEFIDSPDEFSRRLPLMAKGRDFSDPIALNWTDG EECCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCCCEECCCCCCCCEEEEECCC GTDIDFGSLTKELLAYLGATGADLAFGHEVRNLSKESDGSWTVTVRNTRTRRTRTISAKF CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEEE VFVGAGGGALPLLQKSGIKEIKGFAGFPVSGQFLRCTNPELIDKHEAKVYGKAAVGAPPM EEEECCCCCCHHHHHCCHHHHHCCCCCCCCCCEEECCCCHHHCCCHHHEEECCCCCCCCC SVPHLDTRVINGKPGLLFGPYAGWTPKFLKDGSNADLFKSVRPGNIAPMLGVGVTELSLV CCCCCCEEEECCCCCEEECCCCCCCHHHHCCCCCCHHHHCCCCCCCCHHHCCCHHHHHHH KYLVSELLKSQAGKVYTMEEFIPRANGRDWELITAGQRVQIIRRKGVGGVLELGTAVIAA HHHHHHHHHHHCCCEEEHHHHCCCCCCCCEEEEECCCCEEHHHHCCCCCHHHHCCEEEEE QDGTIAGLLGASPGASTCVTAMLDVLQRCFPREYADWTPRLREMIPSLGVKLSEDKALFH CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCEECCCHHHHH EVWDWTTKALHLSESNTPQAAGVGSAV HHHHHHHHEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA