| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is recX [H]
Identifier: 54025811
GI number: 54025811
Start: 4061146
End: 4061733
Strand: Reverse
Name: recX [H]
Synonym: nfa38410
Alternate gene names: 54025811
Gene position: 4061733-4061146 (Counterclockwise)
Preceding gene: 54025813
Following gene: 54025810
Centisome position: 67.46
GC content: 75.68
Gene sequence:
>588_bases GTGGCGGCCGGATCCGAGTGGGAGGCGCAGGAGGCGGAGGCGGGCACGAGCCGGTCGACGTCGGAGCGCACCCCGCACGG CGGGACGGTCGAGCAGGCGAAGGAGGCGTGCTTGCGTCTGCTCGCCGTCCGCGCCCGCAGTCGCGCCGAACTCGCGCAGC GGCTGGCCGCCAAGGGCTACTCCGCCGAGGTCGCCGACGCGGCGCTGGCACGGCTCGCCGAGGTCGGGCTGATCGACGAC GCCGCCTTCGCCGAGCAGTGGGTCGCCTCGCGACACACCTACTCCGGCAAGGGCAGGCAGGCGCTGGCGCAGGAGCTGCG CCGCAAGGGCGTCGCCGCCGCCGATGTCGACGCGGCCCTGGCCGCGGTGAGCGACGACGACGAACAGGCACGGGCGGCCG AGCTGGTCCGGCGCAAGCTGCGCACCATGCCGCGAAACCTGGAGCGCAACAAGGTTCTTCGGCGGCTGGTCGGCATGCTC GCCCGGCGCGGGTACCCCCAGTCCACGGCCTTCGCCGTGGTGAAGGCCGAGCTGGGCGCCGCCGAGGACCTCGGCGCCGC GGGCATGGACGCCGGGCCGGCGGACTGA
Upstream 100 bases:
>100_bases CGGAGCGGCGGATCCCGGCCGAGGTGACGAGAGGCGACGGCGGGGCAAGAACTCCCGGTCGGCGGGCGCGGGTGGTCGCG CCGCGCGCCGGGCGGATCCG
Downstream 100 bases:
>100_bases CCGCCCCGGCGCCCCGGTCTGGATTGCCCGTATTTTGCGGAATCGTTATCGCCGTTGCCCGGTTTGCCCGTTCTCGCGCT GCCTGTCGGCGGCGGCGCCC
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MAAGSEWEAQEAEAGTSRSTSERTPHGGTVEQAKEACLRLLAVRARSRAELAQRLAAKGYSAEVADAALARLAEVGLIDD AAFAEQWVASRHTYSGKGRQALAQELRRKGVAAADVDAALAAVSDDDEQARAAELVRRKLRTMPRNLERNKVLRRLVGML ARRGYPQSTAFAVVKAELGAAEDLGAAGMDAGPAD
Sequences:
>Translated_195_residues MAAGSEWEAQEAEAGTSRSTSERTPHGGTVEQAKEACLRLLAVRARSRAELAQRLAAKGYSAEVADAALARLAEVGLIDD AAFAEQWVASRHTYSGKGRQALAQELRRKGVAAADVDAALAAVSDDDEQARAAELVRRKLRTMPRNLERNKVLRRLVGML ARRGYPQSTAFAVVKAELGAAEDLGAAGMDAGPAD >Mature_194_residues AAGSEWEAQEAEAGTSRSTSERTPHGGTVEQAKEACLRLLAVRARSRAELAQRLAAKGYSAEVADAALARLAEVGLIDDA AFAEQWVASRHTYSGKGRQALAQELRRKGVAAADVDAALAAVSDDDEQARAAELVRRKLRTMPRNLERNKVLRRLVGMLA RRGYPQSTAFAVVKAELGAAEDLGAAGMDAGPAD
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 20697; Mature: 20566
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGSEWEAQEAEAGTSRSTSERTPHGGTVEQAKEACLRLLAVRARSRAELAQRLAAKGY CCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SAEVADAALARLAEVGLIDDAAFAEQWVASRHTYSGKGRQALAQELRRKGVAAADVDAAL CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHH AAVSDDDEQARAAELVRRKLRTMPRNLERNKVLRRLVGMLARRGYPQSTAFAVVKAELGA HHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC AEDLGAAGMDAGPAD HHHCCCCCCCCCCCC >Mature Secondary Structure AAGSEWEAQEAEAGTSRSTSERTPHGGTVEQAKEACLRLLAVRARSRAELAQRLAAKGY CCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SAEVADAALARLAEVGLIDDAAFAEQWVASRHTYSGKGRQALAQELRRKGVAAADVDAAL CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHH AAVSDDDEQARAAELVRRKLRTMPRNLERNKVLRRLVGMLARRGYPQSTAFAVVKAELGA HHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC AEDLGAAGMDAGPAD HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9140972 [H]