| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54025769
Identifier: 54025769
GI number: 54025769
Start: 4022332
End: 4022724
Strand: Reverse
Name: 54025769
Synonym: nfa37990
Alternate gene names: NA
Gene position: 4022724-4022332 (Counterclockwise)
Preceding gene: 54025775
Following gene: 54025768
Centisome position: 66.81
GC content: 78.63
Gene sequence:
>393_bases ATGTACAGCGCGACCCGTTCCAGCACACCGGCATTCGGCACCGCCACCCGCGCCACGCTGCCCCGCGCCCGGCGCGCCGG CGTGCGCGATCGCGAGCGGGTCCGCTCGGTCGACCGCAGGCCGCTGGTCGGCCGTCCCGGTGGCGCGCCGCTGCGCTACG AGCGCATGCGTCTCACGCCGCCGCGCCGGCCCGCCCCGCGGCCGCAGCGGCGGGTGGAGCAGGCGCAGTTGGGTTTTGCG ACACTGGCCGCCGCGGCCCTGCTCACCGCGCTGATCGTCGCGGGCTTCCTGGTGCTCGCCCAGTGGCGTGCGGCGGCGCC GCAGCCGGCGCAGCAGCCCGCGCCCGCGGTGGTCGAACAGCCGAGCGCGGCGGCCGAACCGTGGTGGCGCTGA
Upstream 100 bases:
>100_bases CGAGCAGGTCGGACCCGGGCGCCGCCCCGCCCGATGCCACCGCCCGCCCCGCCCCGACGCCCTTCGAGCCGCAACCAGGA TCCCCACGGAGGTTTGTCCG
Downstream 100 bases:
>100_bases ACGGTTTCCGCGCGTCGCTGCCGTCGGCTCGGCGCGGTGGCGCACCGGACGCGGCGCCCGCCCATGCGGCAACGGCCCAG GTTTTGGCCGCGGTGACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MYSATRSSTPAFGTATRATLPRARRAGVRDRERVRSVDRRPLVGRPGGAPLRYERMRLTPPRRPAPRPQRRVEQAQLGFA TLAAAALLTALIVAGFLVLAQWRAAAPQPAQQPAPAVVEQPSAAAEPWWR
Sequences:
>Translated_130_residues MYSATRSSTPAFGTATRATLPRARRAGVRDRERVRSVDRRPLVGRPGGAPLRYERMRLTPPRRPAPRPQRRVEQAQLGFA TLAAAALLTALIVAGFLVLAQWRAAAPQPAQQPAPAVVEQPSAAAEPWWR >Mature_130_residues MYSATRSSTPAFGTATRATLPRARRAGVRDRERVRSVDRRPLVGRPGGAPLRYERMRLTPPRRPAPRPQRRVEQAQLGFA TLAAAALLTALIVAGFLVLAQWRAAAPQPAQQPAPAVVEQPSAAAEPWWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14240; Mature: 14240
Theoretical pI: Translated: 12.58; Mature: 12.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSATRSSTPAFGTATRATLPRARRAGVRDRERVRSVDRRPLVGRPGGAPLRYERMRLTP CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEECCEECCC PRRPAPRPQRRVEQAQLGFATLAAAALLTALIVAGFLVLAQWRAAAPQPAQQPAPAVVEQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCC PSAAAEPWWR CCCCCCCCCC >Mature Secondary Structure MYSATRSSTPAFGTATRATLPRARRAGVRDRERVRSVDRRPLVGRPGGAPLRYERMRLTP CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEECCEECCC PRRPAPRPQRRVEQAQLGFATLAAAALLTALIVAGFLVLAQWRAAAPQPAQQPAPAVVEQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCC PSAAAEPWWR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA