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The map label for this gene is yhcM [H]

Identifier: 54025701

GI number: 54025701

Start: 3949377

End: 3950336

Strand: Reverse

Name: yhcM [H]

Synonym: nfa37310

Alternate gene names: 54025701

Gene position: 3950336-3949377 (Counterclockwise)

Preceding gene: 54025706

Following gene: 54025699

Centisome position: 65.61

GC content: 70.42

Gene sequence:

>960_bases
ATGGTGCCCCCGCCCATGTTCGACGAGGTCAGCTTCTCCTCCTACATCCCGGACCCGAACGAGCCCAGCCAGGCCGCCGC
GGTGCGCAAGGCCGAGGACTTCGCCCGCGAGGTCGCCAAGATCCACAAGGCGGCGGGCAAGAAGAGCCTGTTCGGCAAGA
AGAAGCAGGTCACCGGCGCCGGCCTGTACCTCGACGGCGGCTTCGGCGTCGGCAAGACCCACCTGCTCGCCTCGATCTTC
CACAGCGCGCCCGCCCCGAAGTCCTTCGGGACCTTCGGCGAGCTGACCAACCTGGTCGGCGCACTGGGTTTCACCAACGC
CCTCGAGCGCCTGTCGGCCAACAGCGTGCTGTGCATCGACGAATTCGAACTCGACGACCCGGGCGATACGATGCTGGTCT
CGCGGCTGCTCACCGAGCTGTCCGCGCGCGGTGTCTCCATCGCCGCGACCTCCAACACGCTGCCCGGCCAGCTCGGCGAG
GGGCGCTTCGCGGCGCAGGACTTCATGCGCGAGATCAAGAAGCTCGGCGCGATCTTCGAGGCCGTGCGGGTGGACGGCCC
CGACTACCGCCACCGCGACCTGCCGCCCGCCCCGGAACCGACCTCGCCCGCCGAGCTCGCCGAACGCGCCGCGGCGACAC
CGGGTTCCACGCTCGACGAGTTCGACGCCCTGCTGGCGCACCTGAGCACGCTGCACCCGTCCAAGTACGGCGCGCTGATC
GCCGGGGTGAGCGCGGTGTTCGTCGCCGGCGTGCACCCGGTCACCGACCAGGCCGTCGCGCTGCGCATCGTGGTGCTGGC
CGACCGCCTCTACGACGCGAGCGTGCCGGTCACGGTGTCCGGGGCCAAGCTCGACGAGATCTTCTCCCCGGAGATGCTCG
AGGGCGGCTACCGCAAGAAGTACCTGCGCGCCATCTCCCGGCTGCTGGCGCTCTCGCGCTTCGAGGCGGCCACCGCGTAG

Upstream 100 bases:

>100_bases
TGCATGAAACCAGCACACACCACGTCTTTAGGCTTCGTCCATGCAAGAGCGCCTCGTCGATCGCCATCCGGAGGTTCCGG
CCGACCAACTCGTCGCCCAG

Downstream 100 bases:

>100_bases
CCGCCACCCGGCCCCGCCGGTCAGAAGACCAGGCGCAGCACGTAGTCGTGGTGCACTTCGCGGCCCACCGTGAAGGTCTT
GGTGCCGACCTTCTCGAACC

Product: putative ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MVPPPMFDEVSFSSYIPDPNEPSQAAAVRKAEDFAREVAKIHKAAGKKSLFGKKKQVTGAGLYLDGGFGVGKTHLLASIF
HSAPAPKSFGTFGELTNLVGALGFTNALERLSANSVLCIDEFELDDPGDTMLVSRLLTELSARGVSIAATSNTLPGQLGE
GRFAAQDFMREIKKLGAIFEAVRVDGPDYRHRDLPPAPEPTSPAELAERAAATPGSTLDEFDALLAHLSTLHPSKYGALI
AGVSAVFVAGVHPVTDQAVALRIVVLADRLYDASVPVTVSGAKLDEIFSPEMLEGGYRKKYLRAISRLLALSRFEAATA

Sequences:

>Translated_319_residues
MVPPPMFDEVSFSSYIPDPNEPSQAAAVRKAEDFAREVAKIHKAAGKKSLFGKKKQVTGAGLYLDGGFGVGKTHLLASIF
HSAPAPKSFGTFGELTNLVGALGFTNALERLSANSVLCIDEFELDDPGDTMLVSRLLTELSARGVSIAATSNTLPGQLGE
GRFAAQDFMREIKKLGAIFEAVRVDGPDYRHRDLPPAPEPTSPAELAERAAATPGSTLDEFDALLAHLSTLHPSKYGALI
AGVSAVFVAGVHPVTDQAVALRIVVLADRLYDASVPVTVSGAKLDEIFSPEMLEGGYRKKYLRAISRLLALSRFEAATA
>Mature_319_residues
MVPPPMFDEVSFSSYIPDPNEPSQAAAVRKAEDFAREVAKIHKAAGKKSLFGKKKQVTGAGLYLDGGFGVGKTHLLASIF
HSAPAPKSFGTFGELTNLVGALGFTNALERLSANSVLCIDEFELDDPGDTMLVSRLLTELSARGVSIAATSNTLPGQLGE
GRFAAQDFMREIKKLGAIFEAVRVDGPDYRHRDLPPAPEPTSPAELAERAAATPGSTLDEFDALLAHLSTLHPSKYGALI
AGVSAVFVAGVHPVTDQAVALRIVVLADRLYDASVPVTVSGAKLDEIFSPEMLEGGYRKKYLRAISRLLALSRFEAATA

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Escherichia coli, GI1789627, Length=320, Percent_Identity=29.375, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 33909; Mature: 33909

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPPPMFDEVSFSSYIPDPNEPSQAAAVRKAEDFAREVAKIHKAAGKKSLFGKKKQVTGA
CCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHCCCCC
GLYLDGGFGVGKTHLLASIFHSAPAPKSFGTFGELTNLVGALGFTNALERLSANSVLCID
CEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
EFELDDPGDTMLVSRLLTELSARGVSIAATSNTLPGQLGEGRFAAQDFMREIKKLGAIFE
CCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AVRVDGPDYRHRDLPPAPEPTSPAELAERAAATPGSTLDEFDALLAHLSTLHPSKYGALI
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
AGVSAVFVAGVHPVTDQAVALRIVVLADRLYDASVPVTVSGAKLDEIFSPEMLEGGYRKK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHCCCHHHCCHHHHH
YLRAISRLLALSRFEAATA
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVPPPMFDEVSFSSYIPDPNEPSQAAAVRKAEDFAREVAKIHKAAGKKSLFGKKKQVTGA
CCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHCCCCC
GLYLDGGFGVGKTHLLASIFHSAPAPKSFGTFGELTNLVGALGFTNALERLSANSVLCID
CEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
EFELDDPGDTMLVSRLLTELSARGVSIAATSNTLPGQLGEGRFAAQDFMREIKKLGAIFE
CCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AVRVDGPDYRHRDLPPAPEPTSPAELAERAAATPGSTLDEFDALLAHLSTLHPSKYGALI
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
AGVSAVFVAGVHPVTDQAVALRIVVLADRLYDASVPVTVSGAKLDEIFSPEMLEGGYRKK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHCCCHHHCCHHHHH
YLRAISRLLALSRFEAATA
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]