Click here to switch to the map view.

The map label for this gene is 54025706

Identifier: 54025706

GI number: 54025706

Start: 3954775

End: 3955470

Strand: Reverse

Name: 54025706

Synonym: nfa37360

Alternate gene names: NA

Gene position: 3955470-3954775 (Counterclockwise)

Preceding gene: 54025707

Following gene: 54025701

Centisome position: 65.69

GC content: 68.53

Gene sequence:

>696_bases
ATGGCGCGACTCGATTATCAAGCTCTCAACTCCACCATCCGATACCTGATGTTCTCGGTGTACCAGGTGCAGCCGGGCGT
GCTGGGTGACGACCGCGAGGCCGCCATCAAGGAGGCGAAGGCCTTCTTCGACGGCCTCGCCGAGAAGGACGTGGTGGTGC
GCGGCATCTACGACGTCGCGGGCATGCGGGCCGACGCCGATTTCATGGTGTGGACGCACGCCGAGCGGGTCGAGGACCTG
CAGGCCGCCTACGCCGATTTCCGCCGCACCACCGAACTGGGCCGCGCCAGCGACCCGGTGTGGAGCAACGTGGCGCTGCA
CCGCCCCGCCGAGTTCAACAAGAGCCACATCCCGGCGTTCCTGGCCGGGGAGGAGCCGGGCAACTACATCTGCGTGTACC
CGTTCGTGCGGTCCTACGAGTGGTACCTGCTGCCCGACGAGGAGCGCCGCAAGATGCTGGCCGACCACGGCAAGGCCGCC
CGCGGCTACCCGGATGTGCGCGCCAACACCGTCAGCTCGTTCGCGCTCGGCGACTACGAGTGGATCCTGGCCTTCGAGGC
GCCCGAACTGCACCGCATCGTGGACCTGATGCGCGATCTGCGCGCCACCGAGGCGCGCCTGCACGTGCGCGAGGAGACCC
CGTTCTTCACCGGCCCGCGGGTGGAGATCGAGCAGCTGGTGCCCGCGCTGCCCTGA

Upstream 100 bases:

>100_bases
TGGCCGCCGGCGACGCCGCCGCCCGCCGCATCGCCGGCTTCCTCTCCTGAGTGGGAGGGCACACGCGTTACCTCCGGTCC
CGCAGTGGCACGATGGACCC

Downstream 100 bases:

>100_bases
CCGTCGAACACGCACCGCCCGGCGCATGCCCCCGGAACCAGGGGCATGCGCCGGGCGGTGTCGCTTTCCTAGACTTCGCT
GCGCGTTCGCTGTGCGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MARLDYQALNSTIRYLMFSVYQVQPGVLGDDREAAIKEAKAFFDGLAEKDVVVRGIYDVAGMRADADFMVWTHAERVEDL
QAAYADFRRTTELGRASDPVWSNVALHRPAEFNKSHIPAFLAGEEPGNYICVYPFVRSYEWYLLPDEERRKMLADHGKAA
RGYPDVRANTVSSFALGDYEWILAFEAPELHRIVDLMRDLRATEARLHVREETPFFTGPRVEIEQLVPALP

Sequences:

>Translated_231_residues
MARLDYQALNSTIRYLMFSVYQVQPGVLGDDREAAIKEAKAFFDGLAEKDVVVRGIYDVAGMRADADFMVWTHAERVEDL
QAAYADFRRTTELGRASDPVWSNVALHRPAEFNKSHIPAFLAGEEPGNYICVYPFVRSYEWYLLPDEERRKMLADHGKAA
RGYPDVRANTVSSFALGDYEWILAFEAPELHRIVDLMRDLRATEARLHVREETPFFTGPRVEIEQLVPALP
>Mature_230_residues
ARLDYQALNSTIRYLMFSVYQVQPGVLGDDREAAIKEAKAFFDGLAEKDVVVRGIYDVAGMRADADFMVWTHAERVEDLQ
AAYADFRRTTELGRASDPVWSNVALHRPAEFNKSHIPAFLAGEEPGNYICVYPFVRSYEWYLLPDEERRKMLADHGKAAR
GYPDVRANTVSSFALGDYEWILAFEAPELHRIVDLMRDLRATEARLHVREETPFFTGPRVEIEQLVPALP

Specific function: Unknown

COG id: COG3253

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010644
- InterPro:   IPR011008 [H]

Pfam domain/function: PF06778 Chlor_dismutase [H]

EC number: NA

Molecular weight: Translated: 26402; Mature: 26271

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLDYQALNSTIRYLMFSVYQVQPGVLGDDREAAIKEAKAFFDGLAEKDVVVRGIYDVA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GMRADADFMVWTHAERVEDLQAAYADFRRTTELGRASDPVWSNVALHRPAEFNKSHIPAF
CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCEE
LAGEEPGNYICVYPFVRSYEWYLLPDEERRKMLADHGKAARGYPDVRANTVSSFALGDYE
EECCCCCCEEEEEEHHHCEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCEE
WILAFEAPELHRIVDLMRDLRATEARLHVREETPFFTGPRVEIEQLVPALP
EEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure 
ARLDYQALNSTIRYLMFSVYQVQPGVLGDDREAAIKEAKAFFDGLAEKDVVVRGIYDVA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GMRADADFMVWTHAERVEDLQAAYADFRRTTELGRASDPVWSNVALHRPAEFNKSHIPAF
CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCEE
LAGEEPGNYICVYPFVRSYEWYLLPDEERRKMLADHGKAARGYPDVRANTVSSFALGDYE
EECCCCCCEEEEEEHHHCEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCEE
WILAFEAPELHRIVDLMRDLRATEARLHVREETPFFTGPRVEIEQLVPALP
EEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]