| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is apt
Identifier: 54025658
GI number: 54025658
Start: 3905980
End: 3906555
Strand: Reverse
Name: apt
Synonym: nfa36880
Alternate gene names: 54025658
Gene position: 3906555-3905980 (Counterclockwise)
Preceding gene: 54025659
Following gene: 54025657
Centisome position: 64.88
GC content: 74.31
Gene sequence:
>576_bases ATGAGCAAGCACGCGGCGGTGGAGTCCGACGAGCACGTGGCCGAGCGGACCGCCGAGGCGGCGCGGCAGGTCGAACGCCT CACCCGCTGGCACGACGATTTCCCGACCCCCGGTGTCCGCTTCGCCGACCTCACCCCCGTCTTCGCCGACGCCGAGGGCT TCCGCTCGGTGATCGAATCGCTGGCCGCCTGCGCCCCCGACGCCGATCTGGTCGCCGGCGTGGATGCGCGGGGGTTCCTG CTCGGCGCCGGGGTGGCGGCCACGCTGGGCACCGGTGTGCTCGCCGTCCGGAAGGGCGGCAAACTGCCGCCGCCGGTGAT CAGCCGCGAGTACAGCCTGGAGTACGGCTCGGCGGCGCTGGAGATCCCCGGCAACGGGGTGGAACTGCGCGGACGCCGAG TGTTGCTGCTCGACGACGTGCTGGCCACCGGCGGCACGCTGGCCGCCGCCGCGCACCTGTTCGTCGAGGCTGGCGCCCAG GTCGTGGCCGCCGCGGTGGTGCTGGAGCTGGAGTTCCTCGGCGGCCGCGCCCGCCAGGGCGACTACCCGCTGACCTCGAT CCTCCGCCTGCCCTGA
Upstream 100 bases:
>100_bases CCACACAGGGTGGCACCGGCTGGAACATGGATCGCTGGGTGTTGCGGCGCTGACATGTGTGGCGGGTCGGGAGCGGGTGA GTGATCATGGAGAGGTGTCG
Downstream 100 bases:
>100_bases CGACCGTGCGCGAATAATCGCTGGCGACTCCACCGGTCGCTGGTTACTCTGGATCCCGTCCTCGTCCCCGACGATCGGAG CCCATGGTGCTTTCCTGAGG
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSKHAAVESDEHVAERTAEAARQVERLTRWHDDFPTPGVRFADLTPVFADAEGFRSVIESLAACAPDADLVAGVDARGFL LGAGVAATLGTGVLAVRKGGKLPPPVISREYSLEYGSAALEIPGNGVELRGRRVLLLDDVLATGGTLAAAAHLFVEAGAQ VVAAAVVLELEFLGGRARQGDYPLTSILRLP
Sequences:
>Translated_191_residues MSKHAAVESDEHVAERTAEAARQVERLTRWHDDFPTPGVRFADLTPVFADAEGFRSVIESLAACAPDADLVAGVDARGFL LGAGVAATLGTGVLAVRKGGKLPPPVISREYSLEYGSAALEIPGNGVELRGRRVLLLDDVLATGGTLAAAAHLFVEAGAQ VVAAAVVLELEFLGGRARQGDYPLTSILRLP >Mature_190_residues SKHAAVESDEHVAERTAEAARQVERLTRWHDDFPTPGVRFADLTPVFADAEGFRSVIESLAACAPDADLVAGVDARGFLL GAGVAATLGTGVLAVRKGGKLPPPVISREYSLEYGSAALEIPGNGVELRGRRVLLLDDVLATGGTLAAAAHLFVEAGAQV VAAAVVLELEFLGGRARQGDYPLTSILRLP
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
Organism=Homo sapiens, GI4502171, Length=171, Percent_Identity=43.859649122807, Blast_Score=128, Evalue=3e-30, Organism=Homo sapiens, GI71773201, Length=126, Percent_Identity=47.6190476190476, Blast_Score=104, Evalue=4e-23, Organism=Escherichia coli, GI1786675, Length=177, Percent_Identity=38.9830508474576, Blast_Score=110, Evalue=7e-26, Organism=Caenorhabditis elegans, GI17509087, Length=174, Percent_Identity=39.0804597701149, Blast_Score=110, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6323619, Length=168, Percent_Identity=34.5238095238095, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6320649, Length=175, Percent_Identity=29.7142857142857, Blast_Score=70, Evalue=2e-13, Organism=Drosophila melanogaster, GI17136334, Length=152, Percent_Identity=38.1578947368421, Blast_Score=100, Evalue=9e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APT_NOCFA (Q5YTF5)
Other databases:
- EMBL: AP006618 - RefSeq: YP_119900.1 - ProteinModelPortal: Q5YTF5 - SMR: Q5YTF5 - GeneID: 3109855 - GenomeReviews: AP006618_GR - KEGG: nfa:nfa36880 - NMPDR: fig|247156.1.peg.3595 - HOGENOM: HBG703830 - OMA: GILFYDI - ProtClustDB: PRK02304 - BioCyc: NFAR247156:NFA36880-MONOMER - BRENDA: 2.4.2.7 - GO: GO:0005737 - HAMAP: MF_00004 - InterPro: IPR005764 - InterPro: IPR000836
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.7
Molecular weight: Translated: 19951; Mature: 19820
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHAAVESDEHVAERTAEAARQVERLTRWHDDFPTPGVRFADLTPVFADAEGFRSVIES CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHCCHHHHHHHHHH LAACAPDADLVAGVDARGFLLGAGVAATLGTGVLAVRKGGKLPPPVISREYSLEYGSAAL HHHCCCCCHHEECCCCCCEEECCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCEEE EIPGNGVELRGRRVLLLDDVLATGGTLAAAAHLFVEAGAQVVAAAVVLELEFLGGRARQG EECCCCEEECCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DYPLTSILRLP CCCHHHHCCCC >Mature Secondary Structure SKHAAVESDEHVAERTAEAARQVERLTRWHDDFPTPGVRFADLTPVFADAEGFRSVIES CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHCCHHHHHHHHHH LAACAPDADLVAGVDARGFLLGAGVAATLGTGVLAVRKGGKLPPPVISREYSLEYGSAAL HHHCCCCCHHEECCCCCCEEECCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCEEE EIPGNGVELRGRRVLLLDDVLATGGTLAAAAHLFVEAGAQVVAAAVVLELEFLGGRARQG EECCCCEEECCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DYPLTSILRLP CCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA