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The map label for this gene is 54025659

Identifier: 54025659

GI number: 54025659

Start: 3906603

End: 3908318

Strand: Reverse

Name: 54025659

Synonym: nfa36890

Alternate gene names: NA

Gene position: 3908318-3906603 (Counterclockwise)

Preceding gene: 54025660

Following gene: 54025658

Centisome position: 64.91

GC content: 71.04

Gene sequence:

>1716_bases
ATGCGACAGCCACGCAGCGTCGCGGTGCGGCTGGCGGGGGCGTGCACCGCGCTCGCGCTGGCCGCGGGGCCGGTGACCGG
GTGCTCCGGACAGAGCCAGGTGCCGTCGGTCGGCTACGGAGTCGACGCGGTGATCACCACCTACAACGGTGGCAGCACCC
TCGGCGTGAGCAGCGGCTCGGCGGCGGTGTTCCAGCGGGTACTGACCGGGTTCTTCTACACCGGACCGGAAGGGCAGCAG
GTCGCCGACACCGATGCGGGTACCGCCAAGGAGGTGCCGGGCGAATCGCAGACGATCCAGTACCGGCTGAACCCGGACGG
GGTGTATTCCGACGGCGTGCCGACCTCCTGCGACGATCTGGTGCTCACCTGGGCCGCGCGCAGCGGCCGGTTCACCAAAG
CCGGTCCGGGCGGTCAGGTGCCGATGTTCGACGCGGCGAGCACCGCGGGCTACGCCGACATCGAACGGGTCGACTGCGAG
CCGGGTTCCAAGGACGCCACCGTGGTGTTCCGCCCCGGCGCACGCTACCTGCCGTGGCGCACCCTGTTCGCCGCCGGTGA
GCTGATGCCCGCACACGTGGCGGCACGGGTGGCGGGCGTGCCGAACGTGGTGTCGGTGGTGCAGTCCGGCGATCCCGCCG
CCATGCAGCGGCTGGCCGACTTCTGGAACACCGGCTGGAATCTCGGCACCGGTGATCTCGACCTGTCCCGGTTTCCGTCC
TCGGGGCCCTACCGCATCGAATCCTTCAGTCCCCGTGACGGGTTGGTGCTGGTGGCCAACGAGCGCTGGTGGGGCAACGC
GGCCGAGACCGGACGCGTGGTGGTCTACGACAAGACCGTGGACCTGAAGGCCAAGATCGCCGACAACGCCGTGAGCGTGC
TCGACATCGGCGCGGGGTCGATTCCCGATCTGGACCTGGCCGGGTTCACCGCGAGTACGGTGCCCGGCCGCGGCGCCGAG
CAACTCGTGCTGGCCACCGGCGGCGTGCTGGGCTCGGTGGAGGCCCGCAGGGCGTTCGCCCGGTGCGTGCCGCGTCAGGC
GCTCTACAACGACCTGGGCAAGGCCGCCGAGATCCCGAGCACAGGGCTGGGCACCGGGCCGCTGAATTCGCTGATCACCC
AGCAGGATTCGTTGTTCTACGGCGCGACCACCGGTGCCGCCGAGCCGTACGAGGTGACCGATGTGGCCGGAGCGCGGGCG
GGCTTCGCGGGCACGCCGAACCCCACCATCCGCATCGGCTACCTGAGCCCGGACGACCGGCGCGCGCAGACCGTGGCCAG
GATCGCCGAGTCGTGCAAGGCGGCGGGTATCACCGTCGTCGACGCGGGTGCCCCCGACTTCCGGCCGAACCAGCTCAGCG
AGGGTGCGGTGGACGCGATCCTGGCGAGCACGGGCGCCACGCCCGGCCCGGCGGGCTCGTTGACCGGCACGGTCGCGGCG
GCGGCGCTGCGCACCGGCAACGGTCTCGATTTCGGCCGCTTCGGCAACGGCCGCTACGATGCGATCACCGATCAGCTTGC
CGCCGACGACGATTCGGCCACGCAGCTGAACCTGCTGACCGAGGCCGAGAACCTGCTGTGGTCGGAGATGCCGAGCATCC
CGCTGTTCGCCACCCCCCGCACCATCGCCTTCGGCAACGGTCTGCACAACGGGGTGGCCGGTCCCACACAGGGTGGCACC
GGCTGGAACATGGATCGCTGGGTGTTGCGGCGCTGA

Upstream 100 bases:

>100_bases
CGGCCGAACGCCGCGCCGCGGCCGGGCGCGCGGCCCTCGGGCAAGCGGCATCGCAGGAACTGACGGGCGGTACACACGAC
CAGCTAGGGGGTTTCGTTCG

Downstream 100 bases:

>100_bases
CATGTGTGGCGGGTCGGGAGCGGGTGAGTGATCATGGAGAGGTGTCGATGAGCAAGCACGCGGCGGTGGAGTCCGACGAG
CACGTGGCCGAGCGGACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MRQPRSVAVRLAGACTALALAAGPVTGCSGQSQVPSVGYGVDAVITTYNGGSTLGVSSGSAAVFQRVLTGFFYTGPEGQQ
VADTDAGTAKEVPGESQTIQYRLNPDGVYSDGVPTSCDDLVLTWAARSGRFTKAGPGGQVPMFDAASTAGYADIERVDCE
PGSKDATVVFRPGARYLPWRTLFAAGELMPAHVAARVAGVPNVVSVVQSGDPAAMQRLADFWNTGWNLGTGDLDLSRFPS
SGPYRIESFSPRDGLVLVANERWWGNAAETGRVVVYDKTVDLKAKIADNAVSVLDIGAGSIPDLDLAGFTASTVPGRGAE
QLVLATGGVLGSVEARRAFARCVPRQALYNDLGKAAEIPSTGLGTGPLNSLITQQDSLFYGATTGAAEPYEVTDVAGARA
GFAGTPNPTIRIGYLSPDDRRAQTVARIAESCKAAGITVVDAGAPDFRPNQLSEGAVDAILASTGATPGPAGSLTGTVAA
AALRTGNGLDFGRFGNGRYDAITDQLAADDDSATQLNLLTEAENLLWSEMPSIPLFATPRTIAFGNGLHNGVAGPTQGGT
GWNMDRWVLRR

Sequences:

>Translated_571_residues
MRQPRSVAVRLAGACTALALAAGPVTGCSGQSQVPSVGYGVDAVITTYNGGSTLGVSSGSAAVFQRVLTGFFYTGPEGQQ
VADTDAGTAKEVPGESQTIQYRLNPDGVYSDGVPTSCDDLVLTWAARSGRFTKAGPGGQVPMFDAASTAGYADIERVDCE
PGSKDATVVFRPGARYLPWRTLFAAGELMPAHVAARVAGVPNVVSVVQSGDPAAMQRLADFWNTGWNLGTGDLDLSRFPS
SGPYRIESFSPRDGLVLVANERWWGNAAETGRVVVYDKTVDLKAKIADNAVSVLDIGAGSIPDLDLAGFTASTVPGRGAE
QLVLATGGVLGSVEARRAFARCVPRQALYNDLGKAAEIPSTGLGTGPLNSLITQQDSLFYGATTGAAEPYEVTDVAGARA
GFAGTPNPTIRIGYLSPDDRRAQTVARIAESCKAAGITVVDAGAPDFRPNQLSEGAVDAILASTGATPGPAGSLTGTVAA
AALRTGNGLDFGRFGNGRYDAITDQLAADDDSATQLNLLTEAENLLWSEMPSIPLFATPRTIAFGNGLHNGVAGPTQGGT
GWNMDRWVLRR
>Mature_571_residues
MRQPRSVAVRLAGACTALALAAGPVTGCSGQSQVPSVGYGVDAVITTYNGGSTLGVSSGSAAVFQRVLTGFFYTGPEGQQ
VADTDAGTAKEVPGESQTIQYRLNPDGVYSDGVPTSCDDLVLTWAARSGRFTKAGPGGQVPMFDAASTAGYADIERVDCE
PGSKDATVVFRPGARYLPWRTLFAAGELMPAHVAARVAGVPNVVSVVQSGDPAAMQRLADFWNTGWNLGTGDLDLSRFPS
SGPYRIESFSPRDGLVLVANERWWGNAAETGRVVVYDKTVDLKAKIADNAVSVLDIGAGSIPDLDLAGFTASTVPGRGAE
QLVLATGGVLGSVEARRAFARCVPRQALYNDLGKAAEIPSTGLGTGPLNSLITQQDSLFYGATTGAAEPYEVTDVAGARA
GFAGTPNPTIRIGYLSPDDRRAQTVARIAESCKAAGITVVDAGAPDFRPNQLSEGAVDAILASTGATPGPAGSLTGTVAA
AALRTGNGLDFGRFGNGRYDAITDQLAADDDSATQLNLLTEAENLLWSEMPSIPLFATPRTIAFGNGLHNGVAGPTQGGT
GWNMDRWVLRR

Specific function: Unknown

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.bovis Mb2616c and M.leprae ML0489 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 59069; Mature: 59069

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQPRSVAVRLAGACTALALAAGPVTGCSGQSQVPSVGYGVDAVITTYNGGSTLGVSSGS
CCCCHHHHEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCH
AAVFQRVLTGFFYTGPEGQQVADTDAGTAKEVPGESQTIQYRLNPDGVYSDGVPTSCDDL
HHHHHHHHHHEEEECCCCCEECCCCCCCHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCE
VLTWAARSGRFTKAGPGGQVPMFDAASTAGYADIERVDCEPGSKDATVVFRPGARYLPWR
EEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCHH
TLFAAGELMPAHVAARVAGVPNVVSVVQSGDPAAMQRLADFWNTGWNLGTGDLDLSRFPS
HHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCC
SGPYRIESFSPRDGLVLVANERWWGNAAETGRVVVYDKTVDLKAKIADNAVSVLDIGAGS
CCCEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCC
IPDLDLAGFTASTVPGRGAEQLVLATGGVLGSVEARRAFARCVPRQALYNDLGKAAEIPS
CCCCCCCCCEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCC
TGLGTGPLNSLITQQDSLFYGATTGAAEPYEVTDVAGARAGFAGTPNPTIRIGYLSPDDR
CCCCCCCHHHHHHCCCCEEEEECCCCCCCEEEHHCCCCCCCCCCCCCCEEEEEEECCCHH
RAQTVARIAESCKAAGITVVDAGAPDFRPNQLSEGAVDAILASTGATPGPAGSLTGTVAA
HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
AALRTGNGLDFGRFGNGRYDAITDQLAADDDSATQLNLLTEAENLLWSEMPSIPLFATPR
HHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCCCEEECCC
TIAFGNGLHNGVAGPTQGGTGWNMDRWVLRR
EEEECCCCCCCCCCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MRQPRSVAVRLAGACTALALAAGPVTGCSGQSQVPSVGYGVDAVITTYNGGSTLGVSSGS
CCCCHHHHEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCH
AAVFQRVLTGFFYTGPEGQQVADTDAGTAKEVPGESQTIQYRLNPDGVYSDGVPTSCDDL
HHHHHHHHHHEEEECCCCCEECCCCCCCHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCE
VLTWAARSGRFTKAGPGGQVPMFDAASTAGYADIERVDCEPGSKDATVVFRPGARYLPWR
EEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCHH
TLFAAGELMPAHVAARVAGVPNVVSVVQSGDPAAMQRLADFWNTGWNLGTGDLDLSRFPS
HHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCC
SGPYRIESFSPRDGLVLVANERWWGNAAETGRVVVYDKTVDLKAKIADNAVSVLDIGAGS
CCCEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCC
IPDLDLAGFTASTVPGRGAEQLVLATGGVLGSVEARRAFARCVPRQALYNDLGKAAEIPS
CCCCCCCCCEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCC
TGLGTGPLNSLITQQDSLFYGATTGAAEPYEVTDVAGARAGFAGTPNPTIRIGYLSPDDR
CCCCCCCHHHHHHCCCCEEEEECCCCCCCEEEHHCCCCCCCCCCCCCCEEEEEEECCCHH
RAQTVARIAESCKAAGITVVDAGAPDFRPNQLSEGAVDAILASTGATPGPAGSLTGTVAA
HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
AALRTGNGLDFGRFGNGRYDAITDQLAADDDSATQLNLLTEAENLLWSEMPSIPLFATPR
HHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCCCEEECCC
TIAFGNGLHNGVAGPTQGGTGWNMDRWVLRR
EEEECCCCCCCCCCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]