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The map label for this gene is sufD [C]

Identifier: 54025529

GI number: 54025529

Start: 3766871

End: 3768070

Strand: Reverse

Name: sufD [C]

Synonym: nfa35590

Alternate gene names: 54025529

Gene position: 3768070-3766871 (Counterclockwise)

Preceding gene: 54025530

Following gene: 54025528

Centisome position: 62.58

GC content: 72.92

Gene sequence:

>1200_bases
ATGACCGAGCTCGAATCGACCACCGGGGCGGCCTCCGTGGCCGAGGCGGCCGAGGCACGGACGCCTGCCATCAACAAGGG
CGAGGTGTTCACCTCCTTCGACGTCGACGCCTTCGAGGTGCCCTCCGGTCGCGACGAGGCCTGGCGGTTCACGCCGCTGC
GCCGCCTGCGCGGTCTGCACGACGGCACCGCCGTGCGCGACGGGCAGGCCACCGTCGAGGTGACCCCCGTCGACGGTGTG
ATCACCGAGACCGTGGACCGCACCGACGAGCGCCTCGGCGCCGCGGGCGTGCCCGCCGACCGGGTCGCCGCGCAGGCCTA
CTCCGGCTTCGAGACCGCGACCATCGTCTCGGTCGGCAAGGAGGTCGAGCTCGGCCAGCCGGTCGTCGTCACGATCACCG
GTCCCGGCGCGGGCCGCACCGCCTACGGTCACCTGCTGATCCGGGTCGGCGCCTTCGCCGTCGCCACCGTGGTCATCGAC
CAGCGCGGCGGCGGAACCTACGCCGAGAACGTGGAATTCGTGGTCGGCGACAGCGCCAAGCTCACCGTCGTCGCCGTCCA
GGACTGGGACGACGACGCCGTGCACGCCACCGCGCACCACGCGCGGCTGGGCCGCGACGCCACCCTGCGCCACACCGCGG
TCACCCTGGGCGGCGATCTGGTGCGGCTCACCGGCACCGTCAAGTACGACGGCCCCGGCGGCGACGCCGAACTGCTCGGC
CTCTACTTCGCCGACGCGGGCCAGCACTTCGAGCAGCGGCTGCTTGTCGATCACGCGGTGCCGAACTGCAAGTCGAACGT
GCTGTACAAGGGCGCGCTGCAGGGCGACCCGGCCTCGCCGAAGGGCGACGCTCGCACGGTGTGGGTCGGCGACGTGCTCA
TCCGCGCCGCCGCCGAGGGCACCGACACCTTCGAGCTGAACCGCAACCTGGTGCTCACCGACGGCGCCCGCGCCGACTCG
GTGCCCAACCTCGAGATCGAGACCGGCGAGATCGTCGGCGCCGGGCACGCCTCGGCCACCGGCCGGTTCGACGACGAGCA
GCTGTTCTACCTGCGCGCCCGCGGCATCCCCGAGGACGCGGCCCGCCGCCTGGTGGTGCGCGGCTTCTTCCACGAGATCA
TCCAGAAGATCACGGTGCCCCAGGTCCGGGAGCGGCTGGAGGCGGCCATCGAGGCCGAGCTCGCCGCCGTCGGCGTCTGA

Upstream 100 bases:

>100_bases
TGCGCGGCTTCGTCGAGCCGATCGCCAAGGAACTCCCGATGGAGTACGCGCTGGAACTCAACCGCCTGATCGAACTGCAG
ATGGAAGGGGCCGTCGGCTG

Downstream 100 bases:

>100_bases
CACATCGAAACTTCCCTCCCCGCAAAGGAACTCCATGACCACCCTGGAAATCAAGGACCTGCACGTCGAGGTCGCCAACC
CCGACGAGACGGGCGAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MTELESTTGAASVAEAAEARTPAINKGEVFTSFDVDAFEVPSGRDEAWRFTPLRRLRGLHDGTAVRDGQATVEVTPVDGV
ITETVDRTDERLGAAGVPADRVAAQAYSGFETATIVSVGKEVELGQPVVVTITGPGAGRTAYGHLLIRVGAFAVATVVID
QRGGGTYAENVEFVVGDSAKLTVVAVQDWDDDAVHATAHHARLGRDATLRHTAVTLGGDLVRLTGTVKYDGPGGDAELLG
LYFADAGQHFEQRLLVDHAVPNCKSNVLYKGALQGDPASPKGDARTVWVGDVLIRAAAEGTDTFELNRNLVLTDGARADS
VPNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIPEDAARRLVVRGFFHEIIQKITVPQVRERLEAAIEAELAAVGV

Sequences:

>Translated_399_residues
MTELESTTGAASVAEAAEARTPAINKGEVFTSFDVDAFEVPSGRDEAWRFTPLRRLRGLHDGTAVRDGQATVEVTPVDGV
ITETVDRTDERLGAAGVPADRVAAQAYSGFETATIVSVGKEVELGQPVVVTITGPGAGRTAYGHLLIRVGAFAVATVVID
QRGGGTYAENVEFVVGDSAKLTVVAVQDWDDDAVHATAHHARLGRDATLRHTAVTLGGDLVRLTGTVKYDGPGGDAELLG
LYFADAGQHFEQRLLVDHAVPNCKSNVLYKGALQGDPASPKGDARTVWVGDVLIRAAAEGTDTFELNRNLVLTDGARADS
VPNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIPEDAARRLVVRGFFHEIIQKITVPQVRERLEAAIEAELAAVGV
>Mature_398_residues
TELESTTGAASVAEAAEARTPAINKGEVFTSFDVDAFEVPSGRDEAWRFTPLRRLRGLHDGTAVRDGQATVEVTPVDGVI
TETVDRTDERLGAAGVPADRVAAQAYSGFETATIVSVGKEVELGQPVVVTITGPGAGRTAYGHLLIRVGAFAVATVVIDQ
RGGGTYAENVEFVVGDSAKLTVVAVQDWDDDAVHATAHHARLGRDATLRHTAVTLGGDLVRLTGTVKYDGPGGDAELLGL
YFADAGQHFEQRLLVDHAVPNCKSNVLYKGALQGDPASPKGDARTVWVGDVLIRAAAEGTDTFELNRNLVLTDGARADSV
PNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIPEDAARRLVVRGFFHEIIQKITVPQVRERLEAAIEAELAAVGV

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=386, Percent_Identity=24.8704663212435, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 42270; Mature: 42138

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELESTTGAASVAEAAEARTPAINKGEVFTSFDVDAFEVPSGRDEAWRFTPLRRLRGLH
CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCCCCCEEECHHHHHCCCC
DGTAVRDGQATVEVTPVDGVITETVDRTDERLGAAGVPADRVAAQAYSGFETATIVSVGK
CCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCC
EVELGQPVVVTITGPGAGRTAYGHLLIRVGAFAVATVVIDQRGGGTYAENVEFVVGDSAK
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCEEEEECCCCE
LTVVAVQDWDDDAVHATAHHARLGRDATLRHTAVTLGGDLVRLTGTVKYDGPGGDAELLG
EEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEEEECCCCCCCEEEE
LYFADAGQHFEQRLLVDHAVPNCKSNVLYKGALQGDPASPKGDARTVWVGDVLIRAAAEG
EEECCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEHHHHHHHHCCC
TDTFELNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIPEDA
CCEEEECCCEEEECCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCEEEEEEECCCCHHH
ARRLVVRGFFHEIIQKITVPQVRERLEAAIEAELAAVGV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TELESTTGAASVAEAAEARTPAINKGEVFTSFDVDAFEVPSGRDEAWRFTPLRRLRGLH
CCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCCCCCEEECHHHHHCCCC
DGTAVRDGQATVEVTPVDGVITETVDRTDERLGAAGVPADRVAAQAYSGFETATIVSVGK
CCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCC
EVELGQPVVVTITGPGAGRTAYGHLLIRVGAFAVATVVIDQRGGGTYAENVEFVVGDSAK
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCEEEEECCCCE
LTVVAVQDWDDDAVHATAHHARLGRDATLRHTAVTLGGDLVRLTGTVKYDGPGGDAELLG
EEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEEEECCCCCCCEEEE
LYFADAGQHFEQRLLVDHAVPNCKSNVLYKGALQGDPASPKGDARTVWVGDVLIRAAAEG
EEECCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEHHHHHHHHCCC
TDTFELNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIPEDA
CCEEEECCCEEEECCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCEEEEEEECCCCHHH
ARRLVVRGFFHEIIQKITVPQVRERLEAAIEAELAAVGV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]