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The map label for this gene is yphC [C]

Identifier: 54025484

GI number: 54025484

Start: 3726413

End: 3727462

Strand: Reverse

Name: yphC [C]

Synonym: nfa35140

Alternate gene names: 54025484

Gene position: 3727462-3726413 (Counterclockwise)

Preceding gene: 54025485

Following gene: 54025482

Centisome position: 61.91

GC content: 72.38

Gene sequence:

>1050_bases
ATGCGGGCCATCACTGTGCAGCCGGGGCGGGCCGGGTCGGTACAGGTCGAGGAACTGCCCGATCCCGTCGCGGGAACGGA
CGAACTGCTGGTGCGCGGGGTCGCGCTCGGCGTCTGCGGCACCGACAAGGAGATCGGTGCCGCGGAGTACGGGTGGGCGC
CGCCGGGGCGGGACCGGCTGGTGCTCGGGCACGAGTCGCTGGGCCGGGTCGTGCAGGCGCCGCCGGGCTCGGGATTTGCC
GAGGGCGAGCTGGTGGCCGGTGTGGTGCGCAGGCCCGATCCGGTGCCGTGCGGGGCGTGCGCGCACGGTGAGTTCGACAT
GTGCCGCAACGGCCGCTACCGCGAACGCGGCATCAAGGAACTCGACGGGTTCGGCAGCGAACTGTGGACGGTCGAGACCG
ACTACGCGGTGCGTGTCGACCCGGAGCTCGGCCACCTCGGCGTGCTGCTGGAACCGGCCAGCGTGCTGGCCAAGGCGTGG
GAGCAGATCGAACGCATCGGCGGACGCAGCTGGTTCGAGCCGCGCACGGTGCTGGTGACCGGCGCCGGGCCGATCGGGCT
GCTCGCCGCGCTGATGGGCGTCCAGCGCGCACTCGAGGTGCACGTGCTGGACCGGGTGACCGACGGCCCGAAACCCGCTC
TGGTGCGCGGCCTGGGCGCCACCTACCACCACGGCGACGTGTCGGGGGTGATCGCCGAGACGCATCCGGACGTCGTGATC
GAGGCGACCGGGGTGAGCGCCCTCGTCGTCGCCGCGATGGCGGGCACCGCGCACTACGGGATCACTTGCCTCACCGGCGT
GTCCACCGGGGGGCGGCCGTTCGAAGTGGACACCGGCGGCCTCAACCGGTCCATCGTGCTGGAGAACGACGTGGTGGTCG
GTTCGGTGAACGCCAACCAGCGCCACTATCGCGCCGCGGCGGACGCGCTGGCGGCCGCCGACCCGGGGTGGCTGGCGGCC
ATGATCACCCGACGGGTGCCCCTCGAACGCGCGGTCGAGGCGTTCGGCGACACCGGCGACGAGGTGAAGGTCGTCATCGA
TCTGGAATAA

Upstream 100 bases:

>100_bases
TCGGGGCCCGCCGAATCCGCCGCGAGCGGGCCGCCGCAGCACCAGTTGCTGATCTGAGAGCCGCGGGGTAGAGCGACGGC
GGCGCGGGTAGCCGGAGGTC

Downstream 100 bases:

>100_bases
CCGGCTCTGGAATGAAGCGGCTCTGGAATGAGCCGCTCTGGAAGGATCCGTCTCTGGAACGAGCCGCCCTGGAATGCGCC
GGCCCGGAAGCGATCCGGCT

Product: putative dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MRAITVQPGRAGSVQVEELPDPVAGTDELLVRGVALGVCGTDKEIGAAEYGWAPPGRDRLVLGHESLGRVVQAPPGSGFA
EGELVAGVVRRPDPVPCGACAHGEFDMCRNGRYRERGIKELDGFGSELWTVETDYAVRVDPELGHLGVLLEPASVLAKAW
EQIERIGGRSWFEPRTVLVTGAGPIGLLAALMGVQRALEVHVLDRVTDGPKPALVRGLGATYHHGDVSGVIAETHPDVVI
EATGVSALVVAAMAGTAHYGITCLTGVSTGGRPFEVDTGGLNRSIVLENDVVVGSVNANQRHYRAAADALAAADPGWLAA
MITRRVPLERAVEAFGDTGDEVKVVIDLE

Sequences:

>Translated_349_residues
MRAITVQPGRAGSVQVEELPDPVAGTDELLVRGVALGVCGTDKEIGAAEYGWAPPGRDRLVLGHESLGRVVQAPPGSGFA
EGELVAGVVRRPDPVPCGACAHGEFDMCRNGRYRERGIKELDGFGSELWTVETDYAVRVDPELGHLGVLLEPASVLAKAW
EQIERIGGRSWFEPRTVLVTGAGPIGLLAALMGVQRALEVHVLDRVTDGPKPALVRGLGATYHHGDVSGVIAETHPDVVI
EATGVSALVVAAMAGTAHYGITCLTGVSTGGRPFEVDTGGLNRSIVLENDVVVGSVNANQRHYRAAADALAAADPGWLAA
MITRRVPLERAVEAFGDTGDEVKVVIDLE
>Mature_349_residues
MRAITVQPGRAGSVQVEELPDPVAGTDELLVRGVALGVCGTDKEIGAAEYGWAPPGRDRLVLGHESLGRVVQAPPGSGFA
EGELVAGVVRRPDPVPCGACAHGEFDMCRNGRYRERGIKELDGFGSELWTVETDYAVRVDPELGHLGVLLEPASVLAKAW
EQIERIGGRSWFEPRTVLVTGAGPIGLLAALMGVQRALEVHVLDRVTDGPKPALVRGLGATYHHGDVSGVIAETHPDVVI
EATGVSALVVAAMAGTAHYGITCLTGVSTGGRPFEVDTGGLNRSIVLENDVVVGSVNANQRHYRAAADALAAADPGWLAA
MITRRVPLERAVEAFGDTGDEVKVVIDLE

Specific function: Unknown

COG id: COG1063

COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N [H]

EC number: =1.1.1.47 [H]

Molecular weight: Translated: 36632; Mature: 36632

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAITVQPGRAGSVQVEELPDPVAGTDELLVRGVALGVCGTDKEIGAAEYGWAPPGRDRL
CCEEEECCCCCCCEEHHHCCCCCCCCHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCEE
VLGHESLGRVVQAPPGSGFAEGELVAGVVRRPDPVPCGACAHGEFDMCRNGRYRERGIKE
EECCHHHCCEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHHCHHH
LDGFGSELWTVETDYAVRVDPELGHLGVLLEPASVLAKAWEQIERIGGRSWFEPRTVLVT
HHCCCCEEEEEECCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEE
GAGPIGLLAALMGVQRALEVHVLDRVTDGPKPALVRGLGATYHHGDVSGVIAETHPDVVI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCCCCEEEEECCCCEEE
EATGVSALVVAAMAGTAHYGITCLTGVSTGGRPFEVDTGGLNRSIVLENDVVVGSVNANQ
EECCHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCCCCEEEEECCEEEEECCCCC
RHYRAAADALAAADPGWLAAMITRRVPLERAVEAFGDTGDEVKVVIDLE
HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEEC
>Mature Secondary Structure
MRAITVQPGRAGSVQVEELPDPVAGTDELLVRGVALGVCGTDKEIGAAEYGWAPPGRDRL
CCEEEECCCCCCCEEHHHCCCCCCCCHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCEE
VLGHESLGRVVQAPPGSGFAEGELVAGVVRRPDPVPCGACAHGEFDMCRNGRYRERGIKE
EECCHHHCCEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHHCHHH
LDGFGSELWTVETDYAVRVDPELGHLGVLLEPASVLAKAWEQIERIGGRSWFEPRTVLVT
HHCCCCEEEEEECCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEE
GAGPIGLLAALMGVQRALEVHVLDRVTDGPKPALVRGLGATYHHGDVSGVIAETHPDVVI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCCCCEEEEECCCCEEE
EATGVSALVVAAMAGTAHYGITCLTGVSTGGRPFEVDTGGLNRSIVLENDVVVGSVNANQ
EECCHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCCCCEEEEECCEEEEECCCCC
RHYRAAADALAAADPGWLAAMITRRVPLERAVEAFGDTGDEVKVVIDLE
HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8436115; 11029001; 2803257 [H]