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The map label for this gene is 54025485

Identifier: 54025485

GI number: 54025485

Start: 3727506

End: 3728150

Strand: Reverse

Name: 54025485

Synonym: nfa35150

Alternate gene names: NA

Gene position: 3728150-3727506 (Counterclockwise)

Preceding gene: 54025487

Following gene: 54025484

Centisome position: 61.92

GC content: 71.94

Gene sequence:

>645_bases
ATGGCGCGGCAGGCACGCGGGGAGCGGGCGCGGGCCGCGATCATCGACGCGGCCATCGCGATCCTCACCGATGCCGGCTA
TTCCGCGCTCACCACTCGTGCCGTGCAGGCCGCCTGCGGGCTGTCCAGGGGATCGCTGTTGTTCCAGTTCCCGACCCGGG
AGGACCTGCTCGCGGCGGTCATCGACGAACTCGTCGGCCGCCGCGCGACCCGCGCGCAACGCATCATCGACGAATTCGCC
GCCCGCCCACCCGCCGACCGGCTCGTCGCCGCCATCGCCGCGGTGCGCGAATTGTTCTCCGGCCCGGACTTTCTCGCCGA
AATGGAGCTGTGGTCCGCCGCACGGACGAACCCGGCCCTGCACACCAGCCTGGTGCCGCTGGTCGAGAAGATCGGTGCGC
GACTGCGCGAGCAGCTCACCGAGCTGTTCGGTCCCGAGATCGCTGCCCACCCGCACTATCCGCAGGTGGCGATGTTGACC
GTCGAACTGGCCCGCGGGCTCGCCTTCAGCGCGCCGATCCGGCGCGGGCACGGCGATCGGTCGGTGCTGGAATTCTGGCA
GGCCGCGGCCGCCACCATGCTCGGGCGCTCGGGGCCCGCCGAATCCGCCGCGAGCGGGCCGCCGCAGCACCAGTTGCTGA
TCTGA

Upstream 100 bases:

>100_bases
GGACTAGTTCATCCTGGATGTGATCCAGAGCACTGTCAAGCCCCTGGATACAGTGAAGCGGTCGCCGGTCCGGCGGCGGA
GGAGTCGGTGGGAGGTGGCC

Downstream 100 bases:

>100_bases
GAGCCGCGGGGTAGAGCGACGGCGGCGCGGGTAGCCGGAGGTCATGCGGGCCATCACTGTGCAGCCGGGGCGGGCCGGGT
CGGTACAGGTCGAGGAACTG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Tetr Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MARQARGERARAAIIDAAIAILTDAGYSALTTRAVQAACGLSRGSLLFQFPTREDLLAAVIDELVGRRATRAQRIIDEFA
ARPPADRLVAAIAAVRELFSGPDFLAEMELWSAARTNPALHTSLVPLVEKIGARLREQLTELFGPEIAAHPHYPQVAMLT
VELARGLAFSAPIRRGHGDRSVLEFWQAAAATMLGRSGPAESAASGPPQHQLLI

Sequences:

>Translated_214_residues
MARQARGERARAAIIDAAIAILTDAGYSALTTRAVQAACGLSRGSLLFQFPTREDLLAAVIDELVGRRATRAQRIIDEFA
ARPPADRLVAAIAAVRELFSGPDFLAEMELWSAARTNPALHTSLVPLVEKIGARLREQLTELFGPEIAAHPHYPQVAMLT
VELARGLAFSAPIRRGHGDRSVLEFWQAAAATMLGRSGPAESAASGPPQHQLLI
>Mature_213_residues
ARQARGERARAAIIDAAIAILTDAGYSALTTRAVQAACGLSRGSLLFQFPTREDLLAAVIDELVGRRATRAQRIIDEFAA
RPPADRLVAAIAAVRELFSGPDFLAEMELWSAARTNPALHTSLVPLVEKIGARLREQLTELFGPEIAAHPHYPQVAMLTV
ELARGLAFSAPIRRGHGDRSVLEFWQAAAATMLGRSGPAESAASGPPQHQLLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22962; Mature: 22830

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARQARGERARAAIIDAAIAILTDAGYSALTTRAVQAACGLSRGSLLFQFPTREDLLAAV
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHH
IDELVGRRATRAQRIIDEFAARPPADRLVAAIAAVRELFSGPDFLAEMELWSAARTNPAL
HHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHH
HTSLVPLVEKIGARLREQLTELFGPEIAAHPHYPQVAMLTVELARGLAFSAPIRRGHGDR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHCCHHCCCCCH
SVLEFWQAAAATMLGRSGPAESAASGPPQHQLLI
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARQARGERARAAIIDAAIAILTDAGYSALTTRAVQAACGLSRGSLLFQFPTREDLLAAV
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHH
IDELVGRRATRAQRIIDEFAARPPADRLVAAIAAVRELFSGPDFLAEMELWSAARTNPAL
HHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHH
HTSLVPLVEKIGARLREQLTELFGPEIAAHPHYPQVAMLTVELARGLAFSAPIRRGHGDR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHCCHHCCCCCH
SVLEFWQAAAATMLGRSGPAESAASGPPQHQLLI
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA