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The map label for this gene is 54025449

Identifier: 54025449

GI number: 54025449

Start: 3688144

End: 3689100

Strand: Reverse

Name: 54025449

Synonym: nfa34790

Alternate gene names: NA

Gene position: 3689100-3688144 (Counterclockwise)

Preceding gene: 54025450

Following gene: 54025448

Centisome position: 61.27

GC content: 72.1

Gene sequence:

>957_bases
GTGACGATGTCATCGCATGCCCCGCCCTCGTTCCGGGCGGGCGAGCTGTCGGACGCGCGGCTGTCGGCCGCGCTGAAGAC
CCTGGAGCTGACCGTGCGTCGCCGCCTCGACGGCGTGCTGCACGGCGACCATCTCGGCCTGATTCCCGGCCCGGGGTCCG
AGCCGGGGGAGTCGCGGCTCTACCAGCCCGGCGACGACGTGCGCCAGATGGACTGGTCGGTCACCGCCCGCACCACGCAT
CCGCACGTGCGGCAGATGATCGCCGACCGCGAGCTGGAGACCTGGATGGTCGTAGACCTGTCGGCCAGCCTCGATTTCGG
CACCGCCGCCTGCCAGAAGCGGGATCTCGCGATCGCCGCCGCGGCCGCGATCACCTACCTCACCAGCGGCGGCGGCAACC
GGATCGGCGCGGTGGTCGCCACCGGCGAACAACTGGTGCGAATTCCCGCTCGCAGCGGGCGGATCCACGCCCAGACGCTG
CTGCGCTCGATCGCGACCACCCCGCACGCGCGCGACGGCGTGCGCGGTGATCTGCGCGGCGCCATCGAATCGCTGCGCCG
CCCGCAGCGCAAACGCGGCCTCGCGGTGATCATCAGCGACTTCCTCGGCGAGATCGATTGGCAGCGTTCGCTGCGCGCCA
TCTCCGCGCGGCACGATCTGCTGGCCGTCGAGGTACTCGATCCCCGCGACCTGGAACTGCCCGACGTGGGCGATGTGGTG
CTGCACGATCCCGAGACCGGCCGCACCCGCGAATTCAGCGTCACGCCCACGCTGCGCGCCGATTTCGCCGCCGCCGCGCA
ACGCCACCGCGACCAGGTGGCCCAGGCGCTGCGCAGCTGCGGTGCACCGGTGCTGACCTTGCAGACCGATCGCGACTGGA
TCGCCGACGTGGTCCGGTTCGTGTCCACCCGGCGCCACAGCTTCGGCGCCCCGACCGGGCGGGTGCCTCGCCAGTGA

Upstream 100 bases:

>100_bases
CCCAGGCCCCGATGGCCCCGGCCGGCACCAACCAGCCCAAGTGACGTCGGCGTCGGGTGTGCCCGAGAACCCGCGCGACG
CTCGACCCGAGGTTTCCCGA

Downstream 100 bases:

>100_bases
GTATTTCGCATTTCACCGCACTGATCTGGCTCGGCTTCCTGGCGGTGGTCGCGCTCATCGCGCTCGGCTACGTGCTGGTG
CAGCGGTCCCGGCACCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MTMSSHAPPSFRAGELSDARLSAALKTLELTVRRRLDGVLHGDHLGLIPGPGSEPGESRLYQPGDDVRQMDWSVTARTTH
PHVRQMIADRELETWMVVDLSASLDFGTAACQKRDLAIAAAAAITYLTSGGGNRIGAVVATGEQLVRIPARSGRIHAQTL
LRSIATTPHARDGVRGDLRGAIESLRRPQRKRGLAVIISDFLGEIDWQRSLRAISARHDLLAVEVLDPRDLELPDVGDVV
LHDPETGRTREFSVTPTLRADFAAAAQRHRDQVAQALRSCGAPVLTLQTDRDWIADVVRFVSTRRHSFGAPTGRVPRQ

Sequences:

>Translated_318_residues
MTMSSHAPPSFRAGELSDARLSAALKTLELTVRRRLDGVLHGDHLGLIPGPGSEPGESRLYQPGDDVRQMDWSVTARTTH
PHVRQMIADRELETWMVVDLSASLDFGTAACQKRDLAIAAAAAITYLTSGGGNRIGAVVATGEQLVRIPARSGRIHAQTL
LRSIATTPHARDGVRGDLRGAIESLRRPQRKRGLAVIISDFLGEIDWQRSLRAISARHDLLAVEVLDPRDLELPDVGDVV
LHDPETGRTREFSVTPTLRADFAAAAQRHRDQVAQALRSCGAPVLTLQTDRDWIADVVRFVSTRRHSFGAPTGRVPRQ
>Mature_317_residues
TMSSHAPPSFRAGELSDARLSAALKTLELTVRRRLDGVLHGDHLGLIPGPGSEPGESRLYQPGDDVRQMDWSVTARTTHP
HVRQMIADRELETWMVVDLSASLDFGTAACQKRDLAIAAAAAITYLTSGGGNRIGAVVATGEQLVRIPARSGRIHAQTLL
RSIATTPHARDGVRGDLRGAIESLRRPQRKRGLAVIISDFLGEIDWQRSLRAISARHDLLAVEVLDPRDLELPDVGDVVL
HDPETGRTREFSVTPTLRADFAAAAQRHRDQVAQALRSCGAPVLTLQTDRDWIADVVRFVSTRRHSFGAPTGRVPRQ

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.avium MAV169 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002881
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01882 DUF58 [H]

EC number: NA

Molecular weight: Translated: 34760; Mature: 34629

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSSHAPPSFRAGELSDARLSAALKTLELTVRRRLDGVLHGDHLGLIPGPGSEPGESRL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEECCCCCCCCCCCCCC
YQPGDDVRQMDWSVTARTTHPHVRQMIADRELETWMVVDLSASLDFGTAACQKRDLAIAA
CCCCCHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
AAAITYLTSGGGNRIGAVVATGEQLVRIPARSGRIHAQTLLRSIATTPHARDGVRGDLRG
HHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH
AIESLRRPQRKRGLAVIISDFLGEIDWQRSLRAISARHDLLAVEVLDPRDLELPDVGDVV
HHHHHHCHHHHCCCEEEHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEE
LHDPETGRTREFSVTPTLRADFAAAAQRHRDQVAQALRSCGAPVLTLQTDRDWIADVVRF
EECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
VSTRRHSFGAPTGRVPRQ
HHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TMSSHAPPSFRAGELSDARLSAALKTLELTVRRRLDGVLHGDHLGLIPGPGSEPGESRL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEECCCCCCCCCCCCCC
YQPGDDVRQMDWSVTARTTHPHVRQMIADRELETWMVVDLSASLDFGTAACQKRDLAIAA
CCCCCHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
AAAITYLTSGGGNRIGAVVATGEQLVRIPARSGRIHAQTLLRSIATTPHARDGVRGDLRG
HHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH
AIESLRRPQRKRGLAVIISDFLGEIDWQRSLRAISARHDLLAVEVLDPRDLELPDVGDVV
HHHHHHCHHHHCCCEEEHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEE
LHDPETGRTREFSVTPTLRADFAAAAQRHRDQVAQALRSCGAPVLTLQTDRDWIADVVRF
EECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
VSTRRHSFGAPTGRVPRQ
HHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]