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The map label for this gene is 54025448

Identifier: 54025448

GI number: 54025448

Start: 3687140

End: 3688147

Strand: Reverse

Name: 54025448

Synonym: nfa34780

Alternate gene names: NA

Gene position: 3688147-3687140 (Counterclockwise)

Preceding gene: 54025449

Following gene: 54025447

Centisome position: 61.25

GC content: 68.75

Gene sequence:

>1008_bases
GTGAGTATTTCGCATTTCACCGCACTGATCTGGCTCGGCTTCCTGGCGGTGGTCGCGCTCATCGCGCTCGGCTACGTGCT
GGTGCAGCGGTCCCGGCACCGGCAGATGCTGCGGTTCAGCAACATGGAGGTGCTCGAGAAGGTCGCGCCGTCGCGGCCCT
CGCCGCTGCGGCACGCGCCGATCGCGCTGATGCTGGTCGGCCTGGTGTTCCTCACCATCGCCGCGGCGGGACCGACCTCG
GTGCAGAAAGTGCCGCGCAACCGGGCGACGGTCGTGCTCGTCATGGACGTGTCGCTGTCGATGGAGGCCACCGACGTGCC
GCCGAGCAGGCTCGAGGTGGCCCAGCAGGCGGGCAAGGAGTTCGTCGACGGCCTCACCCAGGGCATCAACCTCGGCTTCG
TCACCTTCGCGGGCACGGCCTCGGTCATGCAGTCGCCGACCACCAACCGGGAGGCGGTCAAGGCCGCCATCGACAACATC
AAGCTGGCCGAGCGCACCGCCACCGGCGAGGGCATCCTCACCGCGTTGCAGTCCATCGAGACGCTGGCGACCGTGCTCGG
CGGTGCCGAGACCCCGCCGCCGGCGCGTATCGTGCTCATGTCCGACGGCAAACAGACCGTGCCCGACGACAAGGATGTCG
ACAACCCCCGGCATGCCTTCACCGCCGCCCGCCTCGCCAAGAGCAAGGGCATCCCGGTCTCGACGATCTCCTTCGGTACC
GAATGGGGCTCGGTGGAGATCCCCGACCAGGACGGCCAGGGCGGCTCGCAGCGGGTCAAGGTGCCGGTGGACAACGAGTC
GCTGCGCGAGATCGCCAAGCTCTCCGGCGGCGAGTTCTACACCGCCTCCAGCCTGGAGGAACTGACCGCCGTCTACGACA
CGCTCGAGGAGCAGATCGGCTACGAGACCACCCGCGGCGATGCCAGCCGCCCGTGGTTGCTGCTCGGCATGCTGGTCGTC
GCCGCGGGCATCGTGACGGGCCTGCTCTATCGTCAACGCCTGCCGTAG

Upstream 100 bases:

>100_bases
TGACCTTGCAGACCGATCGCGACTGGATCGCCGACGTGGTCCGGTTCGTGTCCACCCGGCGCCACAGCTTCGGCGCCCCG
ACCGGGCGGGTGCCTCGCCA

Downstream 100 bases:

>100_bases
CCGCACGCCGTTGTGGCATCGCACAAGGTGCGCTGCCCGCACGCGGACGCAGGAATTCGAACAGATAGGTTAACTCCCAT
GACCAACATCACATCGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSISHFTALIWLGFLAVVALIALGYVLVQRSRHRQMLRFSNMEVLEKVAPSRPSPLRHAPIALMLVGLVFLTIAAAGPTS
VQKVPRNRATVVLVMDVSLSMEATDVPPSRLEVAQQAGKEFVDGLTQGINLGFVTFAGTASVMQSPTTNREAVKAAIDNI
KLAERTATGEGILTALQSIETLATVLGGAETPPPARIVLMSDGKQTVPDDKDVDNPRHAFTAARLAKSKGIPVSTISFGT
EWGSVEIPDQDGQGGSQRVKVPVDNESLREIAKLSGGEFYTASSLEELTAVYDTLEEQIGYETTRGDASRPWLLLGMLVV
AAGIVTGLLYRQRLP

Sequences:

>Translated_335_residues
MSISHFTALIWLGFLAVVALIALGYVLVQRSRHRQMLRFSNMEVLEKVAPSRPSPLRHAPIALMLVGLVFLTIAAAGPTS
VQKVPRNRATVVLVMDVSLSMEATDVPPSRLEVAQQAGKEFVDGLTQGINLGFVTFAGTASVMQSPTTNREAVKAAIDNI
KLAERTATGEGILTALQSIETLATVLGGAETPPPARIVLMSDGKQTVPDDKDVDNPRHAFTAARLAKSKGIPVSTISFGT
EWGSVEIPDQDGQGGSQRVKVPVDNESLREIAKLSGGEFYTASSLEELTAVYDTLEEQIGYETTRGDASRPWLLLGMLVV
AAGIVTGLLYRQRLP
>Mature_334_residues
SISHFTALIWLGFLAVVALIALGYVLVQRSRHRQMLRFSNMEVLEKVAPSRPSPLRHAPIALMLVGLVFLTIAAAGPTSV
QKVPRNRATVVLVMDVSLSMEATDVPPSRLEVAQQAGKEFVDGLTQGINLGFVTFAGTASVMQSPTTNREAVKAAIDNIK
LAERTATGEGILTALQSIETLATVLGGAETPPPARIVLMSDGKQTVPDDKDVDNPRHAFTAARLAKSKGIPVSTISFGTE
WGSVEIPDQDGQGGSQRVKVPVDNESLREIAKLSGGEFYTASSLEELTAVYDTLEEQIGYETTRGDASRPWLLLGMLVVA
AGIVTGLLYRQRLP

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3478_NOCFA (Q5YU15)

Other databases:

- EMBL:   AP006618
- RefSeq:   YP_119690.1
- ProteinModelPortal:   Q5YU15
- GeneID:   3108294
- GenomeReviews:   AP006618_GR
- KEGG:   nfa:nfa34780
- NMPDR:   fig|247156.1.peg.3397
- HOGENOM:   HBG480772
- OMA:   IGFEGWS
- ProtClustDB:   PRK13685
- BioCyc:   NFAR247156:NFA34780-MONOMER
- HAMAP:   MF_01340
- InterPro:   IPR022933
- InterPro:   IPR002035
- SMART:   SM00327

Pfam domain/function: PF00092 VWA

EC number: NA

Molecular weight: Translated: 35888; Mature: 35757

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13c04cd4)-; HASH(0x1acda174)-; HASH(0x18fb176c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISHFTALIWLGFLAVVALIALGYVLVQRSRHRQMLRFSNMEVLEKVAPSRPSPLRHAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHH
IALMLVGLVFLTIAAAGPTSVQKVPRNRATVVLVMDVSLSMEATDVPPSRLEVAQQAGKE
HHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
FVDGLTQGINLGFVTFAGTASVMQSPTTNREAVKAAIDNIKLAERTATGEGILTALQSIE
HHHHHHHCCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
TLATVLGGAETPPPARIVLMSDGKQTVPDDKDVDNPRHAFTAARLAKSKGIPVSTISFGT
HHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCC
EWGSVEIPDQDGQGGSQRVKVPVDNESLREIAKLSGGEFYTASSLEELTAVYDTLEEQIG
CCCCEECCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHC
YETTRGDASRPWLLLGMLVVAAGIVTGLLYRQRLP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
SISHFTALIWLGFLAVVALIALGYVLVQRSRHRQMLRFSNMEVLEKVAPSRPSPLRHAP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHH
IALMLVGLVFLTIAAAGPTSVQKVPRNRATVVLVMDVSLSMEATDVPPSRLEVAQQAGKE
HHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
FVDGLTQGINLGFVTFAGTASVMQSPTTNREAVKAAIDNIKLAERTATGEGILTALQSIE
HHHHHHHCCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
TLATVLGGAETPPPARIVLMSDGKQTVPDDKDVDNPRHAFTAARLAKSKGIPVSTISFGT
HHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCC
EWGSVEIPDQDGQGGSQRVKVPVDNESLREIAKLSGGEFYTASSLEELTAVYDTLEEQIG
CCCCEECCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHC
YETTRGDASRPWLLLGMLVVAAGIVTGLLYRQRLP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA