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The map label for this gene is ypfJ [C]

Identifier: 54025408

GI number: 54025408

Start: 3641903

End: 3642925

Strand: Reverse

Name: ypfJ [C]

Synonym: nfa34380

Alternate gene names: 54025408

Gene position: 3642925-3641903 (Counterclockwise)

Preceding gene: 54025409

Following gene: 54025407

Centisome position: 60.5

GC content: 62.76

Gene sequence:

>1023_bases
ATGACGCATCCGCAGTGGGGGCGCACACCCTCCACGCCGCCGGCGGAGCCGCGGTACCCGGGTGATTGGCCGGTACCGCG
ATCCCCCGACCTCGCGAATCGAACATCGAAACGGCGTGGTAGGAACACGCTTCTGATCGTCACCACTATTGTTCTGACCG
TGACAGCCGTCGTGGCTGGAACGGCGGCGATCATCCGGCAACAATCGTCGACGCCCGCTTCCGCCGGGGCAGGCGGCCTT
CCGACGTTTCCGGCCGCGAGTGCGACCCGCACCGTACCGGTCTCGACGACACAGCGGGGACCCCAGCACGTGGCCGCGCT
GGGTGATCACCCGATTTCTACCGACGCGAATACCGGTCTCGCTGCGATAGCCTGCGACTATGCCCCATGGGGAGCGAGTG
CCAGCCAGGCGCGCCGATTTTATGAGAGCGCCCTTGCGTGCATGAACAGCGCTTGGGAGACGGTCATGTTGTCCAAGATC
CTGCCGTTCTCCGAGCCTGCTCTCGAAGTTCCCGAGGTGGCAAGTTCAGTGTCCAGTCCGTGCACCAACCCCGCCTGGCA
GTCCGATCCGCCGCCTGCTTACTACTGTCCCACCAACCACACCATCTACATGCCGATGGACACCATCGGTATCGACGAAT
TCGGCGACGACGCGGTCATTTACCTCGGGATCCTTGCCCACGAGTACGGCCATCACGTTCAGGCGATTTCGGGGATCACG
TCGGAGGCGCAAATGAAACGATGGATTTTCGGTGCAGGGACGGGTGCAGAGCTGGAAATGTCACGTCGCCTCGAGTTACA
AGCGCAGTGCTTCGCCGGCATGTTCTTCACGGCCGCCTACCAAACGATGAGTCATGAGCAGTACACCCGCGCCGTCAAGG
ACATGTCCAACCGCGGCGACCATCCCGGCTTCGTTCGGGATCACGGATCGCCCGCGAACAACGCGTTCTGGGTGGCGAAC
GGTAGCAGGAATCGTCTTGCTGAATGCAACACGTGGATTGCGGTTGCCGGTGCGGTGGCCTGA

Upstream 100 bases:

>100_bases
GAGCGGCTGCCCTCAGGAGTCGTCGGTACCGCCCCGCCATATGCGCAGGACAAGGTCAGAGCGTGGTGGGACGCGGCGAC
TCTGTGAGGGGACAACTGGG

Downstream 100 bases:

>100_bases
GAGTCCCAGGTGAACTGACTACGGACGCTGGTAACGGTGTGTCGGGCTGACACGGCGACGAAGGCCACGCGCCGGAGCGT
CCACTCCTGGCCTCGTTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MTHPQWGRTPSTPPAEPRYPGDWPVPRSPDLANRTSKRRGRNTLLIVTTIVLTVTAVVAGTAAIIRQQSSTPASAGAGGL
PTFPAASATRTVPVSTTQRGPQHVAALGDHPISTDANTGLAAIACDYAPWGASASQARRFYESALACMNSAWETVMLSKI
LPFSEPALEVPEVASSVSSPCTNPAWQSDPPPAYYCPTNHTIYMPMDTIGIDEFGDDAVIYLGILAHEYGHHVQAISGIT
SEAQMKRWIFGAGTGAELEMSRRLELQAQCFAGMFFTAAYQTMSHEQYTRAVKDMSNRGDHPGFVRDHGSPANNAFWVAN
GSRNRLAECNTWIAVAGAVA

Sequences:

>Translated_340_residues
MTHPQWGRTPSTPPAEPRYPGDWPVPRSPDLANRTSKRRGRNTLLIVTTIVLTVTAVVAGTAAIIRQQSSTPASAGAGGL
PTFPAASATRTVPVSTTQRGPQHVAALGDHPISTDANTGLAAIACDYAPWGASASQARRFYESALACMNSAWETVMLSKI
LPFSEPALEVPEVASSVSSPCTNPAWQSDPPPAYYCPTNHTIYMPMDTIGIDEFGDDAVIYLGILAHEYGHHVQAISGIT
SEAQMKRWIFGAGTGAELEMSRRLELQAQCFAGMFFTAAYQTMSHEQYTRAVKDMSNRGDHPGFVRDHGSPANNAFWVAN
GSRNRLAECNTWIAVAGAVA
>Mature_339_residues
THPQWGRTPSTPPAEPRYPGDWPVPRSPDLANRTSKRRGRNTLLIVTTIVLTVTAVVAGTAAIIRQQSSTPASAGAGGLP
TFPAASATRTVPVSTTQRGPQHVAALGDHPISTDANTGLAAIACDYAPWGASASQARRFYESALACMNSAWETVMLSKIL
PFSEPALEVPEVASSVSSPCTNPAWQSDPPPAYYCPTNHTIYMPMDTIGIDEFGDDAVIYLGILAHEYGHHVQAISGITS
EAQMKRWIFGAGTGAELEMSRRLELQAQCFAGMFFTAAYQTMSHEQYTRAVKDMSNRGDHPGFVRDHGSPANNAFWVANG
SRNRLAECNTWIAVAGAVA

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36446; Mature: 36315

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHPQWGRTPSTPPAEPRYPGDWPVPRSPDLANRTSKRRGRNTLLIVTTIVLTVTAVVAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH
TAAIIRQQSSTPASAGAGGLPTFPAASATRTVPVSTTQRGPQHVAALGDHPISTDANTGL
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHCCCCCCCCCCCCE
AAIACDYAPWGASASQARRFYESALACMNSAWETVMLSKILPFSEPALEVPEVASSVSSP
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
CTNPAWQSDPPPAYYCPTNHTIYMPMDTIGIDEFGDDAVIYLGILAHEYGHHVQAISGIT
CCCCCCCCCCCCEEECCCCCEEEEEHHHCCCCCCCCCEEEEHHHHHHHHCCHHHHHHCCC
SEAQMKRWIFGAGTGAELEMSRRLELQAQCFAGMFFTAAYQTMSHEQYTRAVKDMSNRGD
HHHHHHHHEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HPGFVRDHGSPANNAFWVANGSRNRLAECNTWIAVAGAVA
CCCCCCCCCCCCCCEEEEECCCCCCHHHCCCEEEECCCCC
>Mature Secondary Structure 
THPQWGRTPSTPPAEPRYPGDWPVPRSPDLANRTSKRRGRNTLLIVTTIVLTVTAVVAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH
TAAIIRQQSSTPASAGAGGLPTFPAASATRTVPVSTTQRGPQHVAALGDHPISTDANTGL
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHCCCCCCCCCCCCE
AAIACDYAPWGASASQARRFYESALACMNSAWETVMLSKILPFSEPALEVPEVASSVSSP
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
CTNPAWQSDPPPAYYCPTNHTIYMPMDTIGIDEFGDDAVIYLGILAHEYGHHVQAISGIT
CCCCCCCCCCCCEEECCCCCEEEEEHHHCCCCCCCCCEEEEHHHHHHHHCCHHHHHHCCC
SEAQMKRWIFGAGTGAELEMSRRLELQAQCFAGMFFTAAYQTMSHEQYTRAVKDMSNRGD
HHHHHHHHEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HPGFVRDHGSPANNAFWVANGSRNRLAECNTWIAVAGAVA
CCCCCCCCCCCCCCEEEEECCCCCCHHHCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA