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The map label for this gene is oxaA [H]

Identifier: 54020659

GI number: 54020659

Start: 890232

End: 892061

Strand: Reverse

Name: oxaA [H]

Synonym: mhp697

Alternate gene names: 54020659

Gene position: 892061-890232 (Counterclockwise)

Preceding gene: 54020660

Following gene: 54020658

Centisome position: 99.92

GC content: 28.8

Gene sequence:

>1830_bases
ATGAAAAATAGAAAAATCCGACCTAAAGCTTTTGATTATTTCCAAAGTCAAAATAATCAAAATAAAAAAACCTTTAAATT
TAAAGGGTTTTTTAAGTTTTTAAAGATTTTTTTCTATACAATTATTTTTGGAATTTCCCTAACTGGTTGTATTCAGTCTA
TGGTTGTAAAAACTTCTTATAATCCCGGTGAAGCGCTCGAATTTTATAATTCAAAAGAAGAAATAACTCCAAATTACACA
ATTTTTAGGGAATCAAAAAACAAAGATTTACCTGGAATTGATATAGTTACAAAAAATAATAATTTTTTAGTATCAGCTGA
TAATAAAAAAGTAAATCAAGAAAAAATTCTCAATGCTTTAAGAAAACAGATAAAAAACGAAAATGCCGAATTTGGTGAAT
TTAGTTCACTGATAATGTTTCAAAAAGGAGAAAATGAATTTGAGTATTTAAAAGGCGATAAAAATAATGAATTTATTTTT
TTTAGTTCCTCAGAAAATTCAATAGAGCAAAAAACAAATTGGACAGAGATTAAAATTCCATCACCAAAATATTTTAGCCT
TAAATCTGATAAACAATATTTTGAAAAACTGCGAGATGTTAAAAGTTTACCCATAAATACTTATAGTTTTGATAAATCTA
GTTCAGAAAATGCTGCAATTAGCGAGAAAATTGATAGTTATTTTTTTAATTTAGATAATAAAATTCCGCCCGTTAATAGG
TCGTATGCAATTTTTGCCCGTGATGTTTTTCAGGTAATTTATAACAAATTAATTTTATTACCGCAATTTTCTCAAGGAAA
ACTTGAAAAAGCAATTGCAGAATTTGAGCAAAAATCAGGAAAAGATGTTTCCCCTGAAACTGAAAAAATACTTTCTGGAT
ACGCTAATTTAGTAAAAAAACTTGTTTTTCCAACTAATTTTTCCCGGATTGATATCCAAAATAAAACTTATAGTTGGAAT
AATAACGATGAAAGTGCAGCAAAAAATATTGCTTTTCAAAACAAAATTCCAGCTTTTCCGATTGTTTCCTGAGCAGAATC
CTGAAAATTAGGCCCTTTTTATGCAATTTTTGTTTACCCGTTATCGAAAATTATCCTTTGAGTTACCGCCTCGCAGTCAT
TGTACGAATGGTCGGGTTGGATAACAATTTTATCAATTTTAGCAGTTGTAGTATTTACAAAAATTATTTCATTTATTTTT
AGATTTAAAACAATTTTTGGCCAGAACAAACAGATGGAACTGCAACTTAAAAAGGCAAAAATTGATGCAAAATACGAAAA
TTACAAGAAAAACAAGGTGATGCAGCAGCGACACCGTCAGGAAATTGTTGATTTATATAAAAAAAATAATTTTTCTCCTT
TTTCCCCATTTTCACAAATTTTGGTGACAATGCCGATTTTTATAGCAGTTTGGCGAGCTTTGCAGGGAATTCCAAGTTTT
AAAGTTACTTATTTTTTAGGTTTGGAATTAGCTGCAACCTCCTATCAAAAACTTTTTGAAGGTTATTGAATTTATCTACC
CATAATAATTGTTACGGTTTTGGTGCAGGCATTGCAGCAAATTATCCCAAAAATTTTAAACAAAAAAAAGTCGAATCGGA
TAATGAATGTGCAGGAAAATGAGACTTTAAAAAAACAGCAAAAAACTCAGCGCATAGTTTCCATTATTTTCATATTTTTT
GGGGTAATTTTCCAGGCTTCCCTTCAAATTTATTGAATTATTGGCGGGATATGGGAAATTTTACAAACATTGGGGATATT
TTATTTGCAAAAATCAAATTTTTATCGTGAAAAAATGCGCCCCTGACTGGAAAGAAAAAAATGGGTTTAA

Upstream 100 bases:

>100_bases
AATTTTCGTGTAGTTTTGATTGCGAGAAAGAATTTTTTACCCCTAAGCTTTGAAACCAAATACCAAAAATTAGCTAAAAT
TTTTAAAGAATTAAAGAGAA

Downstream 100 bases:

>100_bases
TTAAAATTATCCCCATTTTTTTAAAATTTTACTTGAAATTTAGTAAAATTTTATTAGTTTAAAAACGTTTAAAAATCAAT
CTGGAGAAATATAATGAAAA

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 609; Mature: 609

Protein sequence:

>609_residues
MKNRKIRPKAFDYFQSQNNQNKKTFKFKGFFKFLKIFFYTIIFGISLTGCIQSMVVKTSYNPGEALEFYNSKEEITPNYT
IFRESKNKDLPGIDIVTKNNNFLVSADNKKVNQEKILNALRKQIKNENAEFGEFSSLIMFQKGENEFEYLKGDKNNEFIF
FSSSENSIEQKTNWTEIKIPSPKYFSLKSDKQYFEKLRDVKSLPINTYSFDKSSSENAAISEKIDSYFFNLDNKIPPVNR
SYAIFARDVFQVIYNKLILLPQFSQGKLEKAIAEFEQKSGKDVSPETEKILSGYANLVKKLVFPTNFSRIDIQNKTYSWN
NNDESAAKNIAFQNKIPAFPIVSWAESWKLGPFYAIFVYPLSKIILWVTASQSLYEWSGWITILSILAVVVFTKIISFIF
RFKTIFGQNKQMELQLKKAKIDAKYENYKKNKVMQQRHRQEIVDLYKKNNFSPFSPFSQILVTMPIFIAVWRALQGIPSF
KVTYFLGLELAATSYQKLFEGYWIYLPIIIVTVLVQALQQIIPKILNKKKSNRIMNVQENETLKKQQKTQRIVSIIFIFF
GVIFQASLQIYWIIGGIWEILQTLGIFYLQKSNFYREKMRPWLERKKWV

Sequences:

>Translated_609_residues
MKNRKIRPKAFDYFQSQNNQNKKTFKFKGFFKFLKIFFYTIIFGISLTGCIQSMVVKTSYNPGEALEFYNSKEEITPNYT
IFRESKNKDLPGIDIVTKNNNFLVSADNKKVNQEKILNALRKQIKNENAEFGEFSSLIMFQKGENEFEYLKGDKNNEFIF
FSSSENSIEQKTNWTEIKIPSPKYFSLKSDKQYFEKLRDVKSLPINTYSFDKSSSENAAISEKIDSYFFNLDNKIPPVNR
SYAIFARDVFQVIYNKLILLPQFSQGKLEKAIAEFEQKSGKDVSPETEKILSGYANLVKKLVFPTNFSRIDIQNKTYSWN
NNDESAAKNIAFQNKIPAFPIVS*AES*KLGPFYAIFVYPLSKIIL*VTASQSLYEWSGWITILSILAVVVFTKIISFIF
RFKTIFGQNKQMELQLKKAKIDAKYENYKKNKVMQQRHRQEIVDLYKKNNFSPFSPFSQILVTMPIFIAVWRALQGIPSF
KVTYFLGLELAATSYQKLFEGY*IYLPIIIVTVLVQALQQIIPKILNKKKSNRIMNVQENETLKKQQKTQRIVSIIFIFF
GVIFQASLQIY*IIGGIWEILQTLGIFYLQKSNFYREKMRP*LERKKWV
>Mature_609_residues
MKNRKIRPKAFDYFQSQNNQNKKTFKFKGFFKFLKIFFYTIIFGISLTGCIQSMVVKTSYNPGEALEFYNSKEEITPNYT
IFRESKNKDLPGIDIVTKNNNFLVSADNKKVNQEKILNALRKQIKNENAEFGEFSSLIMFQKGENEFEYLKGDKNNEFIF
FSSSENSIEQKTNWTEIKIPSPKYFSLKSDKQYFEKLRDVKSLPINTYSFDKSSSENAAISEKIDSYFFNLDNKIPPVNR
SYAIFARDVFQVIYNKLILLPQFSQGKLEKAIAEFEQKSGKDVSPETEKILSGYANLVKKLVFPTNFSRIDIQNKTYSWN
NNDESAAKNIAFQNKIPAFPIVS*AES*KLGPFYAIFVYPLSKIIL*VTASQSLYEWSGWITILSILAVVVFTKIISFIF
RFKTIFGQNKQMELQLKKAKIDAKYENYKKNKVMQQRHRQEIVDLYKKNNFSPFSPFSQILVTMPIFIAVWRALQGIPSF
KVTYFLGLELAATSYQKLFEGY*IYLPIIIVTVLVQALQQIIPKILNKKKSNRIMNVQENETLKKQQKTQRIVSIIFIFF
GVIFQASLQIY*IIGGIWEILQTLGIFYLQKSNFYREKMRP*LERKKWV

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 70266; Mature: 70266

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRKIRPKAFDYFQSQNNQNKKTFKFKGFFKFLKIFFYTIIFGISLTGCIQSMVVKTSY
CCCCCCCCHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NPGEALEFYNSKEEITPNYTIFRESKNKDLPGIDIVTKNNNFLVSADNKKVNQEKILNAL
CCCHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHH
RKQIKNENAEFGEFSSLIMFQKGENEFEYLKGDKNNEFIFFSSSENSIEQKTNWTEIKIP
HHHHCCCCCCCCCHHHEEEEECCCCHHHHHCCCCCCCEEEEECCCCCHHHCCCCEEEEEC
SPKYFSLKSDKQYFEKLRDVKSLPINTYSFDKSSSENAAISEKIDSYFFNLDNKIPPVNR
CCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
SYAIFARDVFQVIYNKLILLPQFSQGKLEKAIAEFEQKSGKDVSPETEKILSGYANLVKK
CHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LVFPTNFSRIDIQNKTYSWNNNDESAAKNIAFQNKIPAFPIVSAESKLGPFYAIFVYPLS
HHCCCCCCEEEECCCEECCCCCCHHHHHHCHHHCCCCCCCEECCCCCCCCEEEHHHHHHH
KIILVTASQSLYEWSGWITILSILAVVVFTKIISFIFRFKTIFGQNKQMELQLKKAKIDA
HHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCC
KYENYKKNKVMQQRHRQEIVDLYKKNNFSPFSPFSQILVTMPIFIAVWRALQGIPSFKVT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE
YFLGLELAATSYQKLFEGYIYLPIIIVTVLVQALQQIIPKILNKKKSNRIMNVQENETLK
EEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHH
KQQKTQRIVSIIFIFFGVIFQASLQIYIIGGIWEILQTLGIFYLQKSNFYREKMRPLERK
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHC
KWV
CCC
>Mature Secondary Structure
MKNRKIRPKAFDYFQSQNNQNKKTFKFKGFFKFLKIFFYTIIFGISLTGCIQSMVVKTSY
CCCCCCCCHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NPGEALEFYNSKEEITPNYTIFRESKNKDLPGIDIVTKNNNFLVSADNKKVNQEKILNAL
CCCHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHH
RKQIKNENAEFGEFSSLIMFQKGENEFEYLKGDKNNEFIFFSSSENSIEQKTNWTEIKIP
HHHHCCCCCCCCCHHHEEEEECCCCHHHHHCCCCCCCEEEEECCCCCHHHCCCCEEEEEC
SPKYFSLKSDKQYFEKLRDVKSLPINTYSFDKSSSENAAISEKIDSYFFNLDNKIPPVNR
CCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
SYAIFARDVFQVIYNKLILLPQFSQGKLEKAIAEFEQKSGKDVSPETEKILSGYANLVKK
CHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LVFPTNFSRIDIQNKTYSWNNNDESAAKNIAFQNKIPAFPIVSAESKLGPFYAIFVYPLS
HHCCCCCCEEEECCCEECCCCCCHHHHHHCHHHCCCCCCCEECCCCCCCCEEEHHHHHHH
KIILVTASQSLYEWSGWITILSILAVVVFTKIISFIFRFKTIFGQNKQMELQLKKAKIDA
HHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCC
KYENYKKNKVMQQRHRQEIVDLYKKNNFSPFSPFSQILVTMPIFIAVWRALQGIPSFKVT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE
YFLGLELAATSYQKLFEGYIYLPIIIVTVLVQALQQIIPKILNKKKSNRIMNVQENETLK
EEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHH
KQQKTQRIVSIIFIFFGVIFQASLQIYIIGGIWEILQTLGIFYLQKSNFYREKMRPLERK
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHC
KWV
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11353084 [H]