| Definition | Mycoplasma hyopneumoniae 232, complete genome. |
|---|---|
| Accession | NC_006360 |
| Length | 892,758 |
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The map label for this gene is 54020658
Identifier: 54020658
GI number: 54020658
Start: 887535
End: 890138
Strand: Reverse
Name: 54020658
Synonym: mhp696
Alternate gene names: NA
Gene position: 890138-887535 (Counterclockwise)
Preceding gene: 54020659
Following gene: 54020657
Centisome position: 99.71
GC content: 25.73
Gene sequence:
>2604_bases ATGAAAAACAAAATCACACCTTGTATTTGGTCGCTTATTTCAAACACTCACCTTAGAAAAGCCGAAAGTTTAGAAATTTT AGTCCGCGCACTTCTTTTAAATAACGAAGAAATTAATCAAAATTTTAAAAATAAATGATTAAAAATTTATAAAAATAAAA ATTGAAAACCAATTGGCGATTTAAATGAACACTTAAAATTAGCAGCACAATTAGGAGTGACAAAAACAGATATTTTAACT CCTGGACAACAAAAAATTAACATATTAGCTAAATTAGTAAACAGTGGAATTATTAAAATTAGAGAATATATCAGCATAAT TTTGTTTAATTTAGTTAGTTTTATCAACTATGAATATCGTCATATTTTTAAAATGACGCTTGAATTGCTTAAAAAACAGA ACAATTCTCCTGTTTCTGTTGATGAAATATTTCAAAATTTTAATTTTGGCGAACCAGTTTGCGCTGAATTTAACATAAAA TTACTCCGTTACAATTTAAAACAAAAAGATCATATTTTTTATATTTTAATTTCAGGAGTTTTTTTTGAAGTTTTGTCATC TCGGGGAAAAAATCAACAATATAACATTAATTTTTTTAAAATAAAACTTTATGATCACTGATATTCAAGGATTGATGAAT TAATTAAAAGATGTAATAATCAGCTGGAAAGTTATAATTTTGAAAAAGCAAGTTTGATTAGGTTAGATTCTGAAAAATGA TCAAATTATTTAACCCAAAATTCACAAGCAAATTACGATTATATCGTTGATGTTCTTATGCAAAAAGAGGCAAATAATCT TGAGGAAAAAAAGGATAATACTATAAGGTTTAAAGCATCAATTAATCATCTAGAAAATCAACCGGAGAAAAATTTAGAAA ATTCCTTACAAGAAACACAAATAAATCAAGATATTTCAACTACAATTTCAAATAACCCCGAAAAAGTTGATATTGAATTA GAAGCTATTTTAGAAAATAGTCAAGAAAATAAAGTTGATTTATCAGAATTACCCGCAAATTTTAATGATAAGGATCAAGC AGAAAGTCACCAAATTTCTCTTGAAAATGCAGATTTAACTTCCACAAATTCAGTTGAAAAACTTGAAATTGAAGAAAAAA TACAAGAAAAACAGAGCGATATTCGCATAATTTCTAATAATTTAGAACAAAATTGTTGTCCAAAGCAAAATGCTGTTGAA AAAGAAATTGAAAAAACTTATGAAGACAATATAGAAAAAAACAACAGTTTTTACAGTAATTTTTACCAAGATCAATTTGA AAGAGATTTTAATAAAATTTCTGAACCATCTGGTGAAAAAAATCTGCAAGATAACACACAAAGTGAAATATGCGCAGCTG AAAAATGTTGTAATCGCATCCAATTAGAAAAAGAAAATCTTGAACATATAGATTCTTCAAAACAAGAAAAGGTTGTTAAA ATCAACAGCAATTATCTTAATAAAGGCGAAAATAATTCTAATACTAATAAAAAAGTTCCTTCACTTCCGTTATTATCCCA AGCAAAACAGGAGATGCAAAGAGAAATTTCAAAATATCCAATTTCAAAATCAGTTAATTCCAAGGAACATTACTATAATT ATTTTATTCATAAAATTAACAAATTATTTAACTTTTCCTTGGAAAACATGTTAAATAAAACTAATTTTAAGCAAAATTTT TTTAATATATTAGATTTTCATAAGAAAAATCACGAAATTGTATTAAAACCTAAAAAAACAATAATAAAAAGTGGGAAAAA CTTGCTCTTAATTTCCCCTTCGGCAAATTTAATTTATTCTAAGATTAAAAATGAATTATGTAAAACAGAGATCAGCGAAA AAAACTATGAAATAGTAACTTTTTTTGATGATTATAACCTTGAAAGTTTTATCGGTTATAATGATTTTGTTTTAGGTTCT AAGGAAAAATTAAACTTTATCCCTGGTCCATTTGCAAGAATTTTACACAAGGCTTATTGAAATCCAGAAAAAAAATATTG CTTAATTCTTGAAAATATCGACAACAATGCCGCAAAAATTACATTAGCTCCTTTAAAACCGCTTTTTATTCGCGGAGAAA ACGGTGAAAGTTTGCTCGGAATTTCGCAGTTTGATCTATCTTTCTATATATTTTCTCATCCTGAGGAAAAAAATTTTATC CCCGGAAATCTTATAATTATTGGTACAGTAAATTCTAATTTAGATAGGGATTTTGTTAATCTTTCCCCTGATTTTCTTGA AAATTGAGAGATTAAATATTTAGAAAGAGATAATTTATATTCACATATTACCAAATATCAAATTTGTGATACAGGATTAT CTTGAAAGCACTTTTCAGAGAAGTTAAATTCCTTGCTAGAATCAGAAAATTTAAACGATAAATGATTTTTACCTAACCAA ATTGAAACAAAAATTCTTGAAAATCCCCGGATTTTTGTAGATAAGGTTCTCTTTTCGCTTTGAAATTTCACTTCACCCGA GAAAAGAAAGATAATTTTTAGATCAAATTCTTATTCTGTTATGGTTAAGGAATTTTTAGAAACTAAAGGATCAAAACGCT TAAATATTTTTAAATTCGACTATGAAAAAATTAAAAATATATAA
Upstream 100 bases:
>100_bases GGTTTAATTAAAATTATCCCCATTTTTTTAAAATTTTACTTGAAATTTAGTAAAATTTTATTAGTTTAAAAACGTTTAAA AATCAATCTGGAGAAATATA
Downstream 100 bases:
>100_bases GAATTTAAATTATTTTTTGCCTAGTTTGTTTTTTTTAGGGGGCGCTTTTTTTGTTTTAGTTAGTTGTGGTTCAACCCATT TCGGGTTAAATATTTCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 867; Mature: 867
Protein sequence:
>867_residues MKNKITPCIWSLISNTHLRKAESLEILVRALLLNNEEINQNFKNKWLKIYKNKNWKPIGDLNEHLKLAAQLGVTKTDILT PGQQKINILAKLVNSGIIKIREYISIILFNLVSFINYEYRHIFKMTLELLKKQNNSPVSVDEIFQNFNFGEPVCAEFNIK LLRYNLKQKDHIFYILISGVFFEVLSSRGKNQQYNINFFKIKLYDHWYSRIDELIKRCNNQLESYNFEKASLIRLDSEKW SNYLTQNSQANYDYIVDVLMQKEANNLEEKKDNTIRFKASINHLENQPEKNLENSLQETQINQDISTTISNNPEKVDIEL EAILENSQENKVDLSELPANFNDKDQAESHQISLENADLTSTNSVEKLEIEEKIQEKQSDIRIISNNLEQNCCPKQNAVE KEIEKTYEDNIEKNNSFYSNFYQDQFERDFNKISEPSGEKNLQDNTQSEICAAEKCCNRIQLEKENLEHIDSSKQEKVVK INSNYLNKGENNSNTNKKVPSLPLLSQAKQEMQREISKYPISKSVNSKEHYYNYFIHKINKLFNFSLENMLNKTNFKQNF FNILDFHKKNHEIVLKPKKTIIKSGKNLLLISPSANLIYSKIKNELCKTEISEKNYEIVTFFDDYNLESFIGYNDFVLGS KEKLNFIPGPFARILHKAYWNPEKKYCLILENIDNNAAKITLAPLKPLFIRGENGESLLGISQFDLSFYIFSHPEEKNFI PGNLIIIGTVNSNLDRDFVNLSPDFLENWEIKYLERDNLYSHITKYQICDTGLSWKHFSEKLNSLLESENLNDKWFLPNQ IETKILENPRIFVDKVLFSLWNFTSPEKRKIIFRSNSYSVMVKEFLETKGSKRLNIFKFDYEKIKNI
Sequences:
>Translated_867_residues MKNKITPCIWSLISNTHLRKAESLEILVRALLLNNEEINQNFKNK*LKIYKNKN*KPIGDLNEHLKLAAQLGVTKTDILT PGQQKINILAKLVNSGIIKIREYISIILFNLVSFINYEYRHIFKMTLELLKKQNNSPVSVDEIFQNFNFGEPVCAEFNIK LLRYNLKQKDHIFYILISGVFFEVLSSRGKNQQYNINFFKIKLYDH*YSRIDELIKRCNNQLESYNFEKASLIRLDSEK* SNYLTQNSQANYDYIVDVLMQKEANNLEEKKDNTIRFKASINHLENQPEKNLENSLQETQINQDISTTISNNPEKVDIEL EAILENSQENKVDLSELPANFNDKDQAESHQISLENADLTSTNSVEKLEIEEKIQEKQSDIRIISNNLEQNCCPKQNAVE KEIEKTYEDNIEKNNSFYSNFYQDQFERDFNKISEPSGEKNLQDNTQSEICAAEKCCNRIQLEKENLEHIDSSKQEKVVK INSNYLNKGENNSNTNKKVPSLPLLSQAKQEMQREISKYPISKSVNSKEHYYNYFIHKINKLFNFSLENMLNKTNFKQNF FNILDFHKKNHEIVLKPKKTIIKSGKNLLLISPSANLIYSKIKNELCKTEISEKNYEIVTFFDDYNLESFIGYNDFVLGS KEKLNFIPGPFARILHKAY*NPEKKYCLILENIDNNAAKITLAPLKPLFIRGENGESLLGISQFDLSFYIFSHPEEKNFI PGNLIIIGTVNSNLDRDFVNLSPDFLEN*EIKYLERDNLYSHITKYQICDTGLS*KHFSEKLNSLLESENLNDK*FLPNQ IETKILENPRIFVDKVLFSL*NFTSPEKRKIIFRSNSYSVMVKEFLETKGSKRLNIFKFDYEKIKNI >Mature_867_residues MKNKITPCIWSLISNTHLRKAESLEILVRALLLNNEEINQNFKNK*LKIYKNKN*KPIGDLNEHLKLAAQLGVTKTDILT PGQQKINILAKLVNSGIIKIREYISIILFNLVSFINYEYRHIFKMTLELLKKQNNSPVSVDEIFQNFNFGEPVCAEFNIK LLRYNLKQKDHIFYILISGVFFEVLSSRGKNQQYNINFFKIKLYDH*YSRIDELIKRCNNQLESYNFEKASLIRLDSEK* SNYLTQNSQANYDYIVDVLMQKEANNLEEKKDNTIRFKASINHLENQPEKNLENSLQETQINQDISTTISNNPEKVDIEL EAILENSQENKVDLSELPANFNDKDQAESHQISLENADLTSTNSVEKLEIEEKIQEKQSDIRIISNNLEQNCCPKQNAVE KEIEKTYEDNIEKNNSFYSNFYQDQFERDFNKISEPSGEKNLQDNTQSEICAAEKCCNRIQLEKENLEHIDSSKQEKVVK INSNYLNKGENNSNTNKKVPSLPLLSQAKQEMQREISKYPISKSVNSKEHYYNYFIHKINKLFNFSLENMLNKTNFKQNF FNILDFHKKNHEIVLKPKKTIIKSGKNLLLISPSANLIYSKIKNELCKTEISEKNYEIVTFFDDYNLESFIGYNDFVLGS KEKLNFIPGPFARILHKAY*NPEKKYCLILENIDNNAAKITLAPLKPLFIRGENGESLLGISQFDLSFYIFSHPEEKNFI PGNLIIIGTVNSNLDRDFVNLSPDFLEN*EIKYLERDNLYSHITKYQICDTGLS*KHFSEKLNSLLESENLNDK*FLPNQ IETKILENPRIFVDKVLFSL*NFTSPEKRKIIFRSNSYSVMVKEFLETKGSKRLNIFKFDYEKIKNI
Specific function: Unknown
COG id: COG1401
COG function: function code V; GTPase subunit of restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100009; Mature: 100009
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: PS01164 COPPER_AMINE_OXID_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKITPCIWSLISNTHLRKAESLEILVRALLLNNEEINQNFKNKLKIYKNKNKPIGDLN CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCHHH EHLKLAAQLGVTKTDILTPGQQKINILAKLVNSGIIKIREYISIILFNLVSFINYEYRHI HHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH FKMTLELLKKQNNSPVSVDEIFQNFNFGEPVCAEFNIKLLRYNLKQKDHIFYILISGVFF HHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHH EVLSSRGKNQQYNINFFKIKLYDHYSRIDELIKRCNNQLESYNFEKASLIRLDSEKSNYL HHHHCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC TQNSQANYDYIVDVLMQKEANNLEEKKDNTIRFKASINHLENQPEKNLENSLQETQINQD CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCHHHHHHHHHHHHCCCC ISTTISNNPEKVDIELEAILENSQENKVDLSELPANFNDKDQAESHQISLENADLTSTNS HHHHHCCCCCEEEEEEHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCC VEKLEIEEKIQEKQSDIRIISNNLEQNCCPKQNAVEKEIEKTYEDNIEKNNSFYSNFYQD CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH QFERDFNKISEPSGEKNLQDNTQSEICAAEKCCNRIQLEKENLEHIDSSKQEKVVKINSN HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEECHHHHHHCCCCCCCEEEEECCC YLNKGENNSNTNKKVPSLPLLSQAKQEMQREISKYPISKSVNSKEHYYNYFIHKINKLFN CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH FSLENMLNKTNFKQNFFNILDFHKKNHEIVLKPKKTIIKSGKNLLLISPSANLIYSKIKN HHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCEEEECCCCHHHHHHHHH ELCKTEISEKNYEIVTFFDDYNLESFIGYNDFVLGSKEKLNFIPGPFARILHKAYNPEKK HHHHHHHCCCCCEEEEEEECCCCHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCC YCLILENIDNNAAKITLAPLKPLFIRGENGESLLGISQFDLSFYIFSHPEEKNFIPGNLI EEEEEEECCCCCEEEEEECCCEEEEECCCCCCEEEEEEECEEEEEEECCCCCCCCCCCEE IIGTVNSNLDRDFVNLSPDFLENEIKYLERDNLYSHITKYQICDTGLSKHFSEKLNSLLE EEEECCCCCCCHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SENLNDKFLPNQIETKILENPRIFVDKVLFSLNFTSPEKRKIIFRSNSYSVMVKEFLETK HCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHCC GSKRLNIFKFDYEKIKNI CCCEEEEEEECHHHHCCC >Mature Secondary Structure MKNKITPCIWSLISNTHLRKAESLEILVRALLLNNEEINQNFKNKLKIYKNKNKPIGDLN CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCHHH EHLKLAAQLGVTKTDILTPGQQKINILAKLVNSGIIKIREYISIILFNLVSFINYEYRHI HHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH FKMTLELLKKQNNSPVSVDEIFQNFNFGEPVCAEFNIKLLRYNLKQKDHIFYILISGVFF HHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHH EVLSSRGKNQQYNINFFKIKLYDHYSRIDELIKRCNNQLESYNFEKASLIRLDSEKSNYL HHHHCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC TQNSQANYDYIVDVLMQKEANNLEEKKDNTIRFKASINHLENQPEKNLENSLQETQINQD CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCHHHHHHHHHHHHCCCC ISTTISNNPEKVDIELEAILENSQENKVDLSELPANFNDKDQAESHQISLENADLTSTNS HHHHHCCCCCEEEEEEHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCC VEKLEIEEKIQEKQSDIRIISNNLEQNCCPKQNAVEKEIEKTYEDNIEKNNSFYSNFYQD CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH QFERDFNKISEPSGEKNLQDNTQSEICAAEKCCNRIQLEKENLEHIDSSKQEKVVKINSN HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEECHHHHHHCCCCCCCEEEEECCC YLNKGENNSNTNKKVPSLPLLSQAKQEMQREISKYPISKSVNSKEHYYNYFIHKINKLFN CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH FSLENMLNKTNFKQNFFNILDFHKKNHEIVLKPKKTIIKSGKNLLLISPSANLIYSKIKN HHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCEEEECCCCHHHHHHHHH ELCKTEISEKNYEIVTFFDDYNLESFIGYNDFVLGSKEKLNFIPGPFARILHKAYNPEKK HHHHHHHCCCCCEEEEEEECCCCHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCC YCLILENIDNNAAKITLAPLKPLFIRGENGESLLGISQFDLSFYIFSHPEEKNFIPGNLI EEEEEEECCCCCEEEEEECCCEEEEECCCCCCEEEEEEECEEEEEEECCCCCCCCCCCEE IIGTVNSNLDRDFVNLSPDFLENEIKYLERDNLYSHITKYQICDTGLSKHFSEKLNSLLE EEEECCCCCCCHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SENLNDKFLPNQIETKILENPRIFVDKVLFSLNFTSPEKRKIIFRSNSYSVMVKEFLETK HCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHCC GSKRLNIFKFDYEKIKNI CCCEEEEEEECHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA