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The map label for this gene is atpF

Identifier: 54020002

GI number: 54020002

Start: 61596

End: 62162

Strand: Direct

Name: atpF

Synonym: mhp051

Alternate gene names: 54020002

Gene position: 61596-62162 (Clockwise)

Preceding gene: 54020001

Following gene: 54020003

Centisome position: 6.9

GC content: 27.87

Gene sequence:

>567_bases
ATGGTAAATCTAAATCAATCATTGGGTGACTTATTTAAAGGGATTATCCCTAATGTTTATGTTTTGGGTGCTACGATAGT
TAGTTTTTTGATTTTGTTTTTATTTATTACTTATTTTGTCTATCGTCCGTTAAAGAAATACATAAAAAAACGTAAGGATT
TTTTACAAAGCCATATAGATCTAACAATTAAATCAAATGTAGAAGCTGAAAAACTTGAAAAAAAAAGTCAACAAAAACTG
CTAGAAACTAAAGAGTTTTGCACTGATCTTAAAGAAAAATCACAAATTGAAGCTAATAAATTTCTTGAAGATGCCAAGAA
AACTGCAATCGATAATGCGCGTCAACTAATTAATGAAGGCCAAAAAGTTCTACTTGAATACGAGAATGAAATTAAGTCTA
AATATTATATGAATGTTATAAATGTTGCAGTTGAAATCTGTCAAAAATACCTTGAAAAACAAGATAAAAATAATAAAATT
CTCCAGCAAAGTCTGATTGCTGACTTGGAAAAGGAGCTAAAAAAACGCGAAAATTCCTCCAAAAAAAAGGATAATTTTGG
TAAATAA

Upstream 100 bases:

>100_bases
CAATTTATGCGCTTCTTGTTGCGCTAATTTTAATTTTTGTTGGATAATTTTAAGCAAAAATTAAAATTTTTATTCTTTGA
TAGGTTTAAAAAAAGTTAAA

Downstream 100 bases:

>100_bases
TGTATTTGTATAAAAAAAATTATTATGGTTATGCTGAGAGTCTTTTGGATATTTCCATTTCTGAAAATAATGTTGAAAAA
TATATAAATGATTGTTTTTT

Product: ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MVNLNQSLGDLFKGIIPNVYVLGATIVSFLILFLFITYFVYRPLKKYIKKRKDFLQSHIDLTIKSNVEAEKLEKKSQQKL
LETKEFCTDLKEKSQIEANKFLEDAKKTAIDNARQLINEGQKVLLEYENEIKSKYYMNVINVAVEICQKYLEKQDKNNKI
LQQSLIADLEKELKKRENSSKKKDNFGK

Sequences:

>Translated_188_residues
MVNLNQSLGDLFKGIIPNVYVLGATIVSFLILFLFITYFVYRPLKKYIKKRKDFLQSHIDLTIKSNVEAEKLEKKSQQKL
LETKEFCTDLKEKSQIEANKFLEDAKKTAIDNARQLINEGQKVLLEYENEIKSKYYMNVINVAVEICQKYLEKQDKNNKI
LQQSLIADLEKELKKRENSSKKKDNFGK
>Mature_188_residues
MVNLNQSLGDLFKGIIPNVYVLGATIVSFLILFLFITYFVYRPLKKYIKKRKDFLQSHIDLTIKSNVEAEKLEKKSQQKL
LETKEFCTDLKEKSQIEANKFLEDAKKTAIDNARQLINEGQKVLLEYENEIKSKYYMNVINVAVEICQKYLEKQDKNNKI
LQQSLIADLEKELKKRENSSKKKDNFGK

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_MYCH2 (Q601Z9)

Other databases:

- EMBL:   AE017332
- RefSeq:   YP_115566.1
- STRING:   Q601Z9
- GeneID:   3105590
- GenomeReviews:   AE017332_GR
- KEGG:   mhy:mhp051
- HOGENOM:   HBG568810
- OMA:   LLEYENE
- ProtClustDB:   CLSK741341
- BioCyc:   MHYO295358:MHP051-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 22020; Mature: 22020

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb3dacb4)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNLNQSLGDLFKGIIPNVYVLGATIVSFLILFLFITYFVYRPLKKYIKKRKDFLQSHID
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTIKSNVEAEKLEKKSQQKLLETKEFCTDLKEKSQIEANKFLEDAKKTAIDNARQLINEG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKVLLEYENEIKSKYYMNVINVAVEICQKYLEKQDKNNKILQQSLIADLEKELKKRENSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
KKKDNFGK
CCCCCCCH
>Mature Secondary Structure
MVNLNQSLGDLFKGIIPNVYVLGATIVSFLILFLFITYFVYRPLKKYIKKRKDFLQSHID
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTIKSNVEAEKLEKKSQQKLLETKEFCTDLKEKSQIEANKFLEDAKKTAIDNARQLINEG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKVLLEYENEIKSKYYMNVINVAVEICQKYLEKQDKNNKILQQSLIADLEKELKKRENSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
KKKDNFGK
CCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA