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The map label for this gene is atpH

Identifier: 54020003

GI number: 54020003

Start: 62162

End: 62725

Strand: Direct

Name: atpH

Synonym: mhp052

Alternate gene names: 54020003

Gene position: 62162-62725 (Clockwise)

Preceding gene: 54020002

Following gene: 54020004

Centisome position: 6.96

GC content: 22.87

Gene sequence:

>564_bases
ATGTATTTGTATAAAAAAAATTATTATGGTTATGCTGAGAGTCTTTTGGATATTTCCATTTCTGAAAATAATGTTGAAAA
ATATATAAATGATTGTTTTTTTATTCTTAGTATAATTCAGAATAATCAGGTTTTAATCTTGTTGTTTAAGTCTCATTTTA
TCGGAAAACAGGAAAAATTTAACATAATAGATAAAATTTTTTCAGCAAAAATCGAAAAAATTTTAGTTAATTTTCTTAAA
GTTATTGCTAAAAATAACCTTTTTTTATATTATAAGCAAATTTTGCTAAAATATATTAAGCTGGCAAATTCTCATTTAAG
TCAAACTTGGGGTGAAATTCAAACTGCATTTCCGATTTCTTCAGTAATGACTTCAAGTTTCGAGTCTATTCTTTCAAAAA
AACTAGGAAAAAAAGTTCATCTAAGACATAAAATTAATTCAAAATTAATTTCTGGGATTAGAATAATTGTTGATAATCAA
ATTTTTGAAAATTCACTTTTTTCCGAACTTAAACTGCTAAAACAAAATCTAAAAAAACACCTAATCACCAAAAATGATCT
ATAA

Upstream 100 bases:

>100_bases
AAAATAATAAAATTCTCCAGCAAAGTCTGATTGCTGACTTGGAAAAGGAGCTAAAAAAACGCGAAAATTCCTCCAAAAAA
AAGGATAATTTTGGTAAATA

Downstream 100 bases:

>100_bases
ATTTAAAGGTTTTTATTATGAATAAAGATATAAATATAGCCGCAATAATCAAAAATGAAATAGAAAATTTTGAAGGGAAA
ATTCAAAATCATGACATTGG

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MYLYKKNYYGYAESLLDISISENNVEKYINDCFFILSIIQNNQVLILLFKSHFIGKQEKFNIIDKIFSAKIEKILVNFLK
VIAKNNLFLYYKQILLKYIKLANSHLSQTWGEIQTAFPISSVMTSSFESILSKKLGKKVHLRHKINSKLISGIRIIVDNQ
IFENSLFSELKLLKQNLKKHLITKNDL

Sequences:

>Translated_187_residues
MYLYKKNYYGYAESLLDISISENNVEKYINDCFFILSIIQNNQVLILLFKSHFIGKQEKFNIIDKIFSAKIEKILVNFLK
VIAKNNLFLYYKQILLKYIKLANSHLSQTWGEIQTAFPISSVMTSSFESILSKKLGKKVHLRHKINSKLISGIRIIVDNQ
IFENSLFSELKLLKQNLKKHLITKNDL
>Mature_187_residues
MYLYKKNYYGYAESLLDISISENNVEKYINDCFFILSIIQNNQVLILLFKSHFIGKQEKFNIIDKIFSAKIEKILVNFLK
VIAKNNLFLYYKQILLKYIKLANSHLSQTWGEIQTAFPISSVMTSSFESILSKKLGKKVHLRHKINSKLISGIRIIVDNQ
IFENSLFSELKLLKQNLKKHLITKNDL

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_MYCH2 (Q601Z8)

Other databases:

- EMBL:   AE017332
- RefSeq:   YP_115567.1
- ProteinModelPortal:   Q601Z8
- STRING:   Q601Z8
- GeneID:   3105210
- GenomeReviews:   AE017332_GR
- KEGG:   mhy:mhp052
- eggNOG:   COG0712
- HOGENOM:   HBG568812
- OMA:   INDCFFI
- ProtClustDB:   PRK13436
- BioCyc:   MHYO295358:MHP052-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 21883; Mature: 21883

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLYKKNYYGYAESLLDISISENNVEKYINDCFFILSIIQNNQVLILLFKSHFIGKQEKF
CCEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCHHHH
NIIDKIFSAKIEKILVNFLKVIAKNNLFLYYKQILLKYIKLANSHLSQTWGEIQTAFPIS
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVMTSSFESILSKKLGKKVHLRHKINSKLISGIRIIVDNQIFENSLFSELKLLKQNLKKH
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHH
LITKNDL
CCCCCCC
>Mature Secondary Structure
MYLYKKNYYGYAESLLDISISENNVEKYINDCFFILSIIQNNQVLILLFKSHFIGKQEKF
CCEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCHHHH
NIIDKIFSAKIEKILVNFLKVIAKNNLFLYYKQILLKYIKLANSHLSQTWGEIQTAFPIS
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVMTSSFESILSKKLGKKVHLRHKINSKLISGIRIIVDNQIFENSLFSELKLLKQNLKKH
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHH
LITKNDL
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA