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The map label for this gene is 53723324

Identifier: 53723324

GI number: 53723324

Start: 3106526

End: 3107698

Strand: Reverse

Name: 53723324

Synonym: BPSS2306

Alternate gene names: NA

Gene position: 3107698-3106526 (Counterclockwise)

Preceding gene: 53723325

Following gene: 53723323

Centisome position: 97.94

GC content: 66.58

Gene sequence:

>1173_bases
ATGAAGCAAACGAAGCATCTCGCCGCGCTCGCCGTGCCGGCCGGCTTTCTGCTGTCCGCGGGCGCGCACGCGCAAAGCAG
CGTCACGCTGTACGGGATCGTCGATGCGGGCATCGCCTACGTGCACAACGTCCAGGGCGCCGACGGCCGCAATGAGGCCT
CGCTCTTCAAGTTCAGCAGCGGCAACCTGTCCGGCAGCCGCTGGGGCCTGCGCGGCACCGAGGATCTGGGCGGCGGCCTC
GCCGCGCTGTTCCAGCTCGAAAACGGCTTCAATCTCGGCACGGGGCAGCAGAACGGCAATCGCGAATTCGGCCGCAAGGC
GATCGTCGGCCTCGCGAGCAACACGTGGGGCAGCGTCACGCTCGGCCGCCAGTACGATCCGGTCGTCGATCTCGTACAGG
GGCTCACCGAGGACAACTACTTCGGCGGCGTGTTCGCGACACCGGGCGATCTCGACAACTACGACAACAGCCTGCGCGTG
AGCAACTCGGTGAAATACACGAGCCCGGTGCTGTCGGGCTTCCAGTTCGAAGCGCTGTACGGCTTCGGCGGCGTCGCGGG
CGCGACGGGCAGCGGCCGCACGTACAGCTTCGCCGCAAGCTACGCGAACGGGCCGCTGTCGCTCGGCGCGGGCTATCTGT
ACGCGGACGGCGGCGCGAACGCGACGAACGGCGTGCGCACGTGGACGGGCAGCTCGGACACGCTGTTCAACACCGTGATC
AACCAGGGCTTCGCAAGCGCGAAGTCGATTCAGATCGTGCGCGCCGGCGGCCAGTACGTGCTCGGCTCGGCGACGTTCGG
CCTCGCGTATTCGAACACGCAGTACCGCCGCGATTCGCTGTCGGCATTCAGCGATACCGCGAAGTTCAACAGCGGCTCCG
CGTTCTTCAACTATCAGTTCTCGCCGGCGCTGCGCGCGGGCGTGGGCTACAACTACACGTCGCTGACGGGGCCGGCTTCC
GCGCACTATCATCAGGTGAACCTCGGCGCGGGCTATGCACTGTCCAAGCGCACCGATCTGTACGCGCTGTTCGGCTATCA
GAAGGCGAGCGGCCATACGCTCGGCGCGAACGGCGCGGTGATCGACGCGCAGGCGTCCGTCGGCTCGTATGGCGCGAACT
CGGGCACCGATTCGCAGGAACTCGCGATCGTCGGAATTCGGCACAAGTTCTGA

Upstream 100 bases:

>100_bases
TAATCATATCCATCGCAGAATTAATTGGTTTTCGGTTCGTTTTCCTGTCCGTATCGTTCAGCGATTCGAACGACAAGTCG
ACCACGAGGAAAACCACCAC

Downstream 100 bases:

>100_bases
TTCGCGAGCGCGACGGGCGCGAGTCTCGTTGCGCGGCGGGCAGGGTGGCGGACTGCACGGCGGATCGAGCGGCCCGCCGC
GACGTTCGTCGGCGATATCG

Product: porin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MKQTKHLAALAVPAGFLLSAGAHAQSSVTLYGIVDAGIAYVHNVQGADGRNEASLFKFSSGNLSGSRWGLRGTEDLGGGL
AALFQLENGFNLGTGQQNGNREFGRKAIVGLASNTWGSVTLGRQYDPVVDLVQGLTEDNYFGGVFATPGDLDNYDNSLRV
SNSVKYTSPVLSGFQFEALYGFGGVAGATGSGRTYSFAASYANGPLSLGAGYLYADGGANATNGVRTWTGSSDTLFNTVI
NQGFASAKSIQIVRAGGQYVLGSATFGLAYSNTQYRRDSLSAFSDTAKFNSGSAFFNYQFSPALRAGVGYNYTSLTGPAS
AHYHQVNLGAGYALSKRTDLYALFGYQKASGHTLGANGAVIDAQASVGSYGANSGTDSQELAIVGIRHKF

Sequences:

>Translated_390_residues
MKQTKHLAALAVPAGFLLSAGAHAQSSVTLYGIVDAGIAYVHNVQGADGRNEASLFKFSSGNLSGSRWGLRGTEDLGGGL
AALFQLENGFNLGTGQQNGNREFGRKAIVGLASNTWGSVTLGRQYDPVVDLVQGLTEDNYFGGVFATPGDLDNYDNSLRV
SNSVKYTSPVLSGFQFEALYGFGGVAGATGSGRTYSFAASYANGPLSLGAGYLYADGGANATNGVRTWTGSSDTLFNTVI
NQGFASAKSIQIVRAGGQYVLGSATFGLAYSNTQYRRDSLSAFSDTAKFNSGSAFFNYQFSPALRAGVGYNYTSLTGPAS
AHYHQVNLGAGYALSKRTDLYALFGYQKASGHTLGANGAVIDAQASVGSYGANSGTDSQELAIVGIRHKF
>Mature_390_residues
MKQTKHLAALAVPAGFLLSAGAHAQSSVTLYGIVDAGIAYVHNVQGADGRNEASLFKFSSGNLSGSRWGLRGTEDLGGGL
AALFQLENGFNLGTGQQNGNREFGRKAIVGLASNTWGSVTLGRQYDPVVDLVQGLTEDNYFGGVFATPGDLDNYDNSLRV
SNSVKYTSPVLSGFQFEALYGFGGVAGATGSGRTYSFAASYANGPLSLGAGYLYADGGANATNGVRTWTGSSDTLFNTVI
NQGFASAKSIQIVRAGGQYVLGSATFGLAYSNTQYRRDSLSAFSDTAKFNSGSAFFNYQFSPALRAGVGYNYTSLTGPAS
AHYHQVNLGAGYALSKRTDLYALFGYQKASGHTLGANGAVIDAQASVGSYGANSGTDSQELAIVGIRHKF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40605; Mature: 40605

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTKHLAALAVPAGFLLSAGAHAQSSVTLYGIVDAGIAYVHNVQGADGRNEASLFKFSS
CCCCHHEEEECCCCHHHHCCCCCCCCCEEEEEEHHCCEEEEEECCCCCCCCCCEEEEEEC
GNLSGSRWGLRGTEDLGGGLAALFQLENGFNLGTGQQNGNREFGRKAIVGLASNTWGSVT
CCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCEE
LGRQYDPVVDLVQGLTEDNYFGGVFATPGDLDNYDNSLRVSNSVKYTSPVLSGFQFEALY
ECCCCCHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEECCCCEECHHHHCCEEEEEEE
GFGGVAGATGSGRTYSFAASYANGPLSLGAGYLYADGGANATNGVRTWTGSSDTLFNTVI
CCCCCCCCCCCCCEEEEEEECCCCCHHHCCCEEEECCCCCCCCCEEEECCCCCHHHHHHH
NQGFASAKSIQIVRAGGQYVLGSATFGLAYSNTQYRRDSLSAFSDTAKFNSGSAFFNYQF
HCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEE
SPALRAGVGYNYTSLTGPASAHYHQVNLGAGYALSKRTDLYALFGYQKASGHTLGANGAV
CHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCEEEEEEEECCCCCEECCCCCE
IDAQASVGSYGANSGTDSQELAIVGIRHKF
EECCCCCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MKQTKHLAALAVPAGFLLSAGAHAQSSVTLYGIVDAGIAYVHNVQGADGRNEASLFKFSS
CCCCHHEEEECCCCHHHHCCCCCCCCCEEEEEEHHCCEEEEEECCCCCCCCCCEEEEEEC
GNLSGSRWGLRGTEDLGGGLAALFQLENGFNLGTGQQNGNREFGRKAIVGLASNTWGSVT
CCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCEE
LGRQYDPVVDLVQGLTEDNYFGGVFATPGDLDNYDNSLRVSNSVKYTSPVLSGFQFEALY
ECCCCCHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEECCCCEECHHHHCCEEEEEEE
GFGGVAGATGSGRTYSFAASYANGPLSLGAGYLYADGGANATNGVRTWTGSSDTLFNTVI
CCCCCCCCCCCCCEEEEEEECCCCCHHHCCCEEEECCCCCCCCCEEEECCCCCHHHHHHH
NQGFASAKSIQIVRAGGQYVLGSATFGLAYSNTQYRRDSLSAFSDTAKFNSGSAFFNYQF
HCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEE
SPALRAGVGYNYTSLTGPASAHYHQVNLGAGYALSKRTDLYALFGYQKASGHTLGANGAV
CHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCEEEEEEEECCCCCEECCCCCE
IDAQASVGSYGANSGTDSQELAIVGIRHKF
EECCCCCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]