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The map label for this gene is omp32 [H]

Identifier: 53723307

GI number: 53723307

Start: 3078195

End: 3079322

Strand: Reverse

Name: omp32 [H]

Synonym: BPSS2289

Alternate gene names: 53723307

Gene position: 3079322-3078195 (Counterclockwise)

Preceding gene: 53723308

Following gene: 53723306

Centisome position: 97.05

GC content: 69.15

Gene sequence:

>1128_bases
ATGAACGCGAAATCGATCGCGGCGGCGGCGCTCGCCGTCGCGCAGGCGGGCCTCGCCCACGCACAATCGTCGGTCACGCT
GTACGGCGCGCTCGATGCGGGCGTTCTGTGGCAGAACACGTCCGCCGCGTCGTTCAGCCCGACGGCGCCGAATACGGGCG
CCGTCGTGCGCTTCAAGGACGGCGGCGTCTATTCGAGCCTCTGGGGCATCAAGGGAACGGAGGATCTCGGCGGCGGCTAC
CGCGTGAATTTTCGGCTGCAAGGCGCGTTCGACGGCGGCACCGGCAAGTTCGGGCTGAGCGACGCGCCCGGTGCGGTCGC
CGCGTTCAATCAGATCGCGACGCTCGGCGTGTCCGGGCCGTTCGGCACGTTCAACGCGGGCCGGCAGATCGTACCGATGA
TCTACGCGATGGCCGACACCGACGTGCGCGCGGCGCGCTTCTTCGGCAGCGTGCTGACCGCTTGGCTCGGCCTGAATACC
GCGGCCGGCTGGCCGGGCAACAGCACGAACGCGCCGATCGGCGCGCTCTACGACAGCGATGCGCTCGTCTACCAGTCGCC
CGCGTTCGGCGGCGCGTCGCTCGCGCTCGAGTACGCGCCGGGCGGTGTGCCCGGCGGCGTGCAGCGCGGCGCGCGCGCGT
CGATCGTGCTCAAGTACGCGTCGAACGCGCTCAACCTGGCCGCCGTCTATTACAACGGCCACGACACGAATCCGGCGCCG
GGCGCGAGCGCGACGGGACTCGACAACAACCGCTTCGTCTACGTCGGCGCGCAGTACAAGCTGAAGGATGTCGCGGTGTC
GGCGTCGTACGGCAACGGCCGGAATCCCGCGCGCGGCGATCGCGTGAACCTCGACATGTTCGCGTTCGGGCTCGGCTACC
GCGTGTCGCCGTTCTTTCGCGTGAGCTCGGGCGTCTACTACCTGAAGGACCGGAACCGTTCGGCGAACCGGTCGACGTCG
ATCGTGCTCGGCGCCGATTACGAGCTGTCCAAGCACACCACGCTATATGCGCAGGGGGGGCGCGTCGACAATCGCGGCAC
GATGGCTCAGATGCTGGCGTACGGGCAGCCGGTCGCGCCGGGGCTCGCGACGACCGCCGCGATGCTAGGGATGCGTCATT
CGTTCTAG

Upstream 100 bases:

>100_bases
CTCGTCGAGCGGATCGACTGACGCGGTCGCAACACGGCCACCGTCAGCCTCGATGCTGCCGGGCCATTTCCCCGATATGG
GAGACATGATGGGAGACGTG

Downstream 100 bases:

>100_bases
ATCGCGTCGGATCACTCGCCGGTTCGCCTGCCGGATCGCCCGCCATCCGCCGATTCCGGCTTCCGACGAGGGAACGCTGC
ATGCTCGCCGATCGAGCGTC

Product: porin protein

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MNAKSIAAAALAVAQAGLAHAQSSVTLYGALDAGVLWQNTSAASFSPTAPNTGAVVRFKDGGVYSSLWGIKGTEDLGGGY
RVNFRLQGAFDGGTGKFGLSDAPGAVAAFNQIATLGVSGPFGTFNAGRQIVPMIYAMADTDVRAARFFGSVLTAWLGLNT
AAGWPGNSTNAPIGALYDSDALVYQSPAFGGASLALEYAPGGVPGGVQRGARASIVLKYASNALNLAAVYYNGHDTNPAP
GASATGLDNNRFVYVGAQYKLKDVAVSASYGNGRNPARGDRVNLDMFAFGLGYRVSPFFRVSSGVYYLKDRNRSANRSTS
IVLGADYELSKHTTLYAQGGRVDNRGTMAQMLAYGQPVAPGLATTAAMLGMRHSF

Sequences:

>Translated_375_residues
MNAKSIAAAALAVAQAGLAHAQSSVTLYGALDAGVLWQNTSAASFSPTAPNTGAVVRFKDGGVYSSLWGIKGTEDLGGGY
RVNFRLQGAFDGGTGKFGLSDAPGAVAAFNQIATLGVSGPFGTFNAGRQIVPMIYAMADTDVRAARFFGSVLTAWLGLNT
AAGWPGNSTNAPIGALYDSDALVYQSPAFGGASLALEYAPGGVPGGVQRGARASIVLKYASNALNLAAVYYNGHDTNPAP
GASATGLDNNRFVYVGAQYKLKDVAVSASYGNGRNPARGDRVNLDMFAFGLGYRVSPFFRVSSGVYYLKDRNRSANRSTS
IVLGADYELSKHTTLYAQGGRVDNRGTMAQMLAYGQPVAPGLATTAAMLGMRHSF
>Mature_375_residues
MNAKSIAAAALAVAQAGLAHAQSSVTLYGALDAGVLWQNTSAASFSPTAPNTGAVVRFKDGGVYSSLWGIKGTEDLGGGY
RVNFRLQGAFDGGTGKFGLSDAPGAVAAFNQIATLGVSGPFGTFNAGRQIVPMIYAMADTDVRAARFFGSVLTAWLGLNT
AAGWPGNSTNAPIGALYDSDALVYQSPAFGGASLALEYAPGGVPGGVQRGARASIVLKYASNALNLAAVYYNGHDTNPAP
GASATGLDNNRFVYVGAQYKLKDVAVSASYGNGRNPARGDRVNLDMFAFGLGYRVSPFFRVSSGVYYLKDRNRSANRSTS
IVLGADYELSKHTTLYAQGGRVDNRGTMAQMLAYGQPVAPGLATTAAMLGMRHSF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38839; Mature: 38839

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKSIAAAALAVAQAGLAHAQSSVTLYGALDAGVLWQNTSAASFSPTAPNTGAVVRFKD
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEC
GGVYSSLWGIKGTEDLGGGYRVNFRLQGAFDGGTGKFGLSDAPGAVAAFNQIATLGVSGP
CCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHEEECCCC
FGTFNAGRQIVPMIYAMADTDVRAARFFGSVLTAWLGLNTAAGWPGNSTNAPIGALYDSD
CCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC
ALVYQSPAFGGASLALEYAPGGVPGGVQRGARASIVLKYASNALNLAAVYYNGHDTNPAP
EEEEECCCCCCCEEEEEECCCCCCHHHHCCCCEEEEEEECCCCEEEEEEEECCCCCCCCC
GASATGLDNNRFVYVGAQYKLKDVAVSASYGNGRNPARGDRVNLDMFAFGLGYRVSPFFR
CCCCCCCCCCEEEEEECCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCEEEE
VSSGVYYLKDRNRSANRSTSIVLGADYELSKHTTLYAQGGRVDNRGTMAQMLAYGQPVAP
ECCCEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEECCEECCCCHHHHHHHCCCCCCC
GLATTAAMLGMRHSF
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MNAKSIAAAALAVAQAGLAHAQSSVTLYGALDAGVLWQNTSAASFSPTAPNTGAVVRFKD
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEC
GGVYSSLWGIKGTEDLGGGYRVNFRLQGAFDGGTGKFGLSDAPGAVAAFNQIATLGVSGP
CCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHEEECCCC
FGTFNAGRQIVPMIYAMADTDVRAARFFGSVLTAWLGLNTAAGWPGNSTNAPIGALYDSD
CCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC
ALVYQSPAFGGASLALEYAPGGVPGGVQRGARASIVLKYASNALNLAAVYYNGHDTNPAP
EEEEECCCCCCCEEEEEECCCCCCHHHHCCCCEEEEEEECCCCEEEEEEEECCCCCCCCC
GASATGLDNNRFVYVGAQYKLKDVAVSASYGNGRNPARGDRVNLDMFAFGLGYRVSPFFR
CCCCCCCCCCEEEEEECCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCEEEE
VSSGVYYLKDRNRSANRSTSIVLGADYELSKHTTLYAQGGRVDNRGTMAQMLAYGQPVAP
ECCCEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEECCEECCCCHHHHHHHCCCCCCC
GLATTAAMLGMRHSF
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]