| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53723287
Identifier: 53723287
GI number: 53723287
Start: 3048340
End: 3049497
Strand: Reverse
Name: 53723287
Synonym: BPSS2269
Alternate gene names: NA
Gene position: 3049497-3048340 (Counterclockwise)
Preceding gene: 53723288
Following gene: 53723286
Centisome position: 96.11
GC content: 70.29
Gene sequence:
>1158_bases ATGGCTCGACAATCCACCTCTGTTCCTTTCGAACTCTCCTCCGCCGAGCTCGCGCGCACGCGCGTCGGCATCGTCGACGG CAAGCGCATCTCGCTCGGCGTGCAAGGCGACGCGTTGCGCGGCTTCGTGCTCGAACGGCGCTGCAAAAGCCCCGGCGAGC CGGTATCGACGCAGCGCGTCGGCCTGCGCGACCCGGCGGCCGTCGCGGCGTTCGTCGAACACGACCCTTATGTCGTGCAG CTCGGAATCGACTACCGCGCGTTGCTCGACGTGCACCGCGCGGCGGACGATGCGGGATCGCACGGCGCATTCGCGGTGCA CGATGCACGGTATGCGCGCCCGGCGAGCGAGGCGGGCGGTGCATTCCGCCCAGCGGAGCACGCCGGTGCCGCGCCGGCCG CCTCCGGTGTGCCCACCGCCTCCGCCGCATCCGTCGCGCAGCCGGAGTTCGCGGTCGAATGCGAGCACGACGGCGCGCTG CTCGCGCTGATGCGGCGCATCTGCGCATCGTGCGGCGCGACGCAGTGCTTCTATCACTGGTTCGTCGTCGACGAAGACAC GGGGGAGTTCACGGCGCACGATCTGCTGATCGGCGGCGCGCCCGCATGGGCGCAGCGCTATGTGCATCAGCACTGGTATC TGAACGATCCGGCCGTCGCGCACGCGCGCGACAACACGCAGCCGCTGCGCGGCTCGGCGCTCGCCGAATTGCGCTCCGAT CACTGGCTGAACCACTACGCGCAGACGCAAGGGCTCGGCAGCAACGTGTTCTTTCCCGCGCATCGCCGCGACGTGTCGAC CTTCGGCTTGCTGCACGTTGCCGCGCCGCTGCCCGCGCCGCACGGCGAGGACGCGCTGTGGCGCAACCGGCGCGTGCTGC GCGGGCTCGCGAACGAGATGCTCGAATGGCGCGTCGTGCGGCGGCGCCGCGAGCTCGCGCAGGAGCTGTCGCTTGCCGCG CAGGATGTGCTCGCGCTGCGGCTCGTCGCGCGCGGCGGCGGCGCGCGCCACGTCGCCGAGGAACTGCGGCTCGACGAGCG CGCGGTCTACCAGCTCTTCACCGCGATCAACCGCAAGATGGACAGCAAGCACATCAAGAGCAGCGCGACGAAAGCGAAGC GCCTGGGCCTGCTCGCCGAAGGCTATATCTCGAAATGA
Upstream 100 bases:
>100_bases CGCAATTTGACCTGCCGCCGTGAGCCGCCCGGTCGTCGTGCGCCTTGCGGCTGTCGGGCCAAACCGCCATCGCCTTCCCA CCCCAACCAATGGATCGGCC
Downstream 100 bases:
>100_bases ACGCAAGCGCGCGCGCCATATGCCGTAAACGATCTAAGTCATTACGCGCGCGTTTTCCGTTAGCCTGTATCGCATGCATC GGCCGCCGCGCGCGATGCGC
Product: transcriptional regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MARQSTSVPFELSSAELARTRVGIVDGKRISLGVQGDALRGFVLERRCKSPGEPVSTQRVGLRDPAAVAAFVEHDPYVVQ LGIDYRALLDVHRAADDAGSHGAFAVHDARYARPASEAGGAFRPAEHAGAAPAASGVPTASAASVAQPEFAVECEHDGAL LALMRRICASCGATQCFYHWFVVDEDTGEFTAHDLLIGGAPAWAQRYVHQHWYLNDPAVAHARDNTQPLRGSALAELRSD HWLNHYAQTQGLGSNVFFPAHRRDVSTFGLLHVAAPLPAPHGEDALWRNRRVLRGLANEMLEWRVVRRRRELAQELSLAA QDVLALRLVARGGGARHVAEELRLDERAVYQLFTAINRKMDSKHIKSSATKAKRLGLLAEGYISK
Sequences:
>Translated_385_residues MARQSTSVPFELSSAELARTRVGIVDGKRISLGVQGDALRGFVLERRCKSPGEPVSTQRVGLRDPAAVAAFVEHDPYVVQ LGIDYRALLDVHRAADDAGSHGAFAVHDARYARPASEAGGAFRPAEHAGAAPAASGVPTASAASVAQPEFAVECEHDGAL LALMRRICASCGATQCFYHWFVVDEDTGEFTAHDLLIGGAPAWAQRYVHQHWYLNDPAVAHARDNTQPLRGSALAELRSD HWLNHYAQTQGLGSNVFFPAHRRDVSTFGLLHVAAPLPAPHGEDALWRNRRVLRGLANEMLEWRVVRRRRELAQELSLAA QDVLALRLVARGGGARHVAEELRLDERAVYQLFTAINRKMDSKHIKSSATKAKRLGLLAEGYISK >Mature_384_residues ARQSTSVPFELSSAELARTRVGIVDGKRISLGVQGDALRGFVLERRCKSPGEPVSTQRVGLRDPAAVAAFVEHDPYVVQL GIDYRALLDVHRAADDAGSHGAFAVHDARYARPASEAGGAFRPAEHAGAAPAASGVPTASAASVAQPEFAVECEHDGALL ALMRRICASCGATQCFYHWFVVDEDTGEFTAHDLLIGGAPAWAQRYVHQHWYLNDPAVAHARDNTQPLRGSALAELRSDH WLNHYAQTQGLGSNVFFPAHRRDVSTFGLLHVAAPLPAPHGEDALWRNRRVLRGLANEMLEWRVVRRRRELAQELSLAAQ DVLALRLVARGGGARHVAEELRLDERAVYQLFTAINRKMDSKHIKSSATKAKRLGLLAEGYISK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42028; Mature: 41897
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARQSTSVPFELSSAELARTRVGIVDGKRISLGVQGDALRGFVLERRCKSPGEPVSTQRV CCCCCCCCCEEECHHHHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCC GLRDPAAVAAFVEHDPYVVQLGIDYRALLDVHRAADDAGSHGAFAVHDARYARPASEAGG CCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCHHCCCHHHCCC AFRPAEHAGAAPAASGVPTASAASVAQPEFAVECEHDGALLALMRRICASCGATQCFYHW CCCCHHHCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEE FVVDEDTGEFTAHDLLIGGAPAWAQRYVHQHWYLNDPAVAHARDNTQPLRGSALAELRSD EEEECCCCCEEEHHEEECCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHH HWLNHYAQTQGLGSNVFFPAHRRDVSTFGLLHVAAPLPAPHGEDALWRNRRVLRGLANEM HHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH LEWRVVRRRRELAQELSLAAQDVLALRLVARGGGARHVAEELRLDERAVYQLFTAINRKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH DSKHIKSSATKAKRLGLLAEGYISK HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ARQSTSVPFELSSAELARTRVGIVDGKRISLGVQGDALRGFVLERRCKSPGEPVSTQRV CCCCCCCCEEECHHHHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCC GLRDPAAVAAFVEHDPYVVQLGIDYRALLDVHRAADDAGSHGAFAVHDARYARPASEAGG CCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCHHCCCHHHCCC AFRPAEHAGAAPAASGVPTASAASVAQPEFAVECEHDGALLALMRRICASCGATQCFYHW CCCCHHHCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEE FVVDEDTGEFTAHDLLIGGAPAWAQRYVHQHWYLNDPAVAHARDNTQPLRGSALAELRSD EEEECCCCCEEEHHEEECCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHH HWLNHYAQTQGLGSNVFFPAHRRDVSTFGLLHVAAPLPAPHGEDALWRNRRVLRGLANEM HHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH LEWRVVRRRRELAQELSLAAQDVLALRLVARGGGARHVAEELRLDERAVYQLFTAINRKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH DSKHIKSSATKAKRLGLLAEGYISK HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA