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The map label for this gene is rfaQ [C]

Identifier: 53723270

GI number: 53723270

Start: 3026074

End: 3027189

Strand: Reverse

Name: rfaQ [C]

Synonym: BPSS2252

Alternate gene names: 53723270

Gene position: 3027189-3026074 (Counterclockwise)

Preceding gene: 53723271

Following gene: 53723269

Centisome position: 95.4

GC content: 74.01

Gene sequence:

>1116_bases
ATGAGCGGCGATCCTTCCGCGCGGCCCGCGGCCGCCGAGCGGCGCGGCACGGGCGAATACGCGAGCATCGCGGTGTTTCG
CGCGCTGCAGCTCGGCGACATGCTGTGCGCGGTGCCCGCGCTGCGCGCACTGCGGCGCGGCGAGCCGCAGGCGCGGATCA
CGCTGATCGGGCTGCCGTGGGCGAAGGCGTTCGCCGAGCGCTTCTCCGATTACGTCGACGACTTCATCGCATTCCCCGGC
GCGCCGGGGCTCGTCGAGCAGCCGCACGACGTCGAGCGGCTCGCCGCGTTCGTCGCCGAATGCCGGTCGCGCCGTTTCGA
TCTCGCGATCCAGCTGCATGGCAGCGGCGCGCAATCGAACGCGATCGTCGCGGGCCTCGGCGCGGCGTCGACGGCGGGTT
TCGCGCCCGATGCGTTCGCGGCCGGCGAGCACGCCGCGCCGCGGCTCGACCGCACGATCGCATGGCCGTCGGCGCTGCCG
GAAATCGCCCGCTACACGAAGCTGATGCGCCGGCTCGGCTACGACGACTGGGGCGACTATCTGGAGTTTCCGCTCGGCGG
CCTCGATTACGCGATCTGCCGCGTGCTGTGCGAGCAGCACGATCTGCGGCCGCGCGAATACGCGGTCGTGCATCCGGGCG
CGCGCATGCAGTCGCGCCGCTGGCCGGTCGCGCGCTTCGCGGGCGTCGCGCGCGCGCTCGCCGAGCGCGGGCTGCGCATC
GTGCTGACGGGCACGCGCGGCGAGGCGGCGCTCGCCGACGCGTTCGCCGCGCAACTGGGCGCGCCGTTCGTCGATCTGTG
CGGCCGCACGCCGCTCGGCGCGCTCGGCGCGCTGATCGGCCGCAGCCGCCTCGTCGTCTGCAACGATACCGGCGTGTCGC
ACGTGGCCGCCGCGCTCGGCGCGCCGAGCGTCGTGATCGCCTGCGGCAGCGACGCCGCGCGCTGGGCGCCGCTCGATCGC
GAGCGCCATCGCGTGCTCGCCGACTATCCGCCGTGCCGCCCGTGCATGTTCGAAACCTGTCCGTACGACCACGCGTGCGC
GAACGCGATCGGCGTCGAGGACGTCGTCAGGCGCGCGGACGCACTGCTCGCCGTGGAGCCGCATCATGTCGCCTAA

Upstream 100 bases:

>100_bases
CGTCGCACGTCGCGGAGATGATCGTCACGTCGATCGCGATTCCGCCCGTGTCGCTGTACTGGCGGCTGCGCGGCGCGCTC
CACTTCCGGGTGCTGTTCCT

Downstream 100 bases:

>100_bases
GCGTTTGCGCGTGCTCACGTGGCACGTGCACGGCAACTACCTGTACTACCTGTCGCAGGCGCCGCACGATTTCTACGTCA
TCACGAAGCCGAACCATCCG

Product: LPS biosynthesis related glycosyltransferase

Products: NA

Alternate protein names: Lipopolysaccharide Heptosyltransferase II; Glycosyltransferase; Lipopolysaccharide Heptosyltransferase III; Heptosyltransferase Family Protein; ADP-HeptoseLPS Heptosyltransferase; ADP-Heptose-LPS Heptosyltransferase II; Glycosyl Transferase; Transferase; ADP-Heptose-LPS Heptosyltransferase; Lipopolysaccharide Heptosyltransferase I; Family 9 Glycosyl Transferase; ADP-HeptoseLPS Heptosyltransferase II; Lipopolysaccharide Heptosyltransferase; LPS Biosynthesis Related Glycosyltransferase; Glycosyl Transferase ADP-HeptoseLPS Heptosyltransferase; ADP-Heptose-LPS Heptosyltransferase II RfaF; ADP-HeptoseLPS Heptosyltransferase-Like Protein; Lipopolysaccharide Core Biosynthesis Heptosyltransferase; Heptosyl Transferase Glycosyltransferase Family 9 Protein; Heptosyltransferase; Hydrolase; Heptosyl Transferase; Heptosyltransferase III WaaQ

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MSGDPSARPAAAERRGTGEYASIAVFRALQLGDMLCAVPALRALRRGEPQARITLIGLPWAKAFAERFSDYVDDFIAFPG
APGLVEQPHDVERLAAFVAECRSRRFDLAIQLHGSGAQSNAIVAGLGAASTAGFAPDAFAAGEHAAPRLDRTIAWPSALP
EIARYTKLMRRLGYDDWGDYLEFPLGGLDYAICRVLCEQHDLRPREYAVVHPGARMQSRRWPVARFAGVARALAERGLRI
VLTGTRGEAALADAFAAQLGAPFVDLCGRTPLGALGALIGRSRLVVCNDTGVSHVAAALGAPSVVIACGSDAARWAPLDR
ERHRVLADYPPCRPCMFETCPYDHACANAIGVEDVVRRADALLAVEPHHVA

Sequences:

>Translated_371_residues
MSGDPSARPAAAERRGTGEYASIAVFRALQLGDMLCAVPALRALRRGEPQARITLIGLPWAKAFAERFSDYVDDFIAFPG
APGLVEQPHDVERLAAFVAECRSRRFDLAIQLHGSGAQSNAIVAGLGAASTAGFAPDAFAAGEHAAPRLDRTIAWPSALP
EIARYTKLMRRLGYDDWGDYLEFPLGGLDYAICRVLCEQHDLRPREYAVVHPGARMQSRRWPVARFAGVARALAERGLRI
VLTGTRGEAALADAFAAQLGAPFVDLCGRTPLGALGALIGRSRLVVCNDTGVSHVAAALGAPSVVIACGSDAARWAPLDR
ERHRVLADYPPCRPCMFETCPYDHACANAIGVEDVVRRADALLAVEPHHVA
>Mature_370_residues
SGDPSARPAAAERRGTGEYASIAVFRALQLGDMLCAVPALRALRRGEPQARITLIGLPWAKAFAERFSDYVDDFIAFPGA
PGLVEQPHDVERLAAFVAECRSRRFDLAIQLHGSGAQSNAIVAGLGAASTAGFAPDAFAAGEHAAPRLDRTIAWPSALPE
IARYTKLMRRLGYDDWGDYLEFPLGGLDYAICRVLCEQHDLRPREYAVVHPGARMQSRRWPVARFAGVARALAERGLRIV
LTGTRGEAALADAFAAQLGAPFVDLCGRTPLGALGALIGRSRLVVCNDTGVSHVAAALGAPSVVIACGSDAARWAPLDRE
RHRVLADYPPCRPCMFETCPYDHACANAIGVEDVVRRADALLAVEPHHVA

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39766; Mature: 39635

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: PS01082 RIBOSOMAL_L7AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDPSARPAAAERRGTGEYASIAVFRALQLGDMLCAVPALRALRRGEPQARITLIGLPW
CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCH
AKAFAERFSDYVDDFIAFPGAPGLVEQPHDVERLAAFVAECRSRRFDLAIQLHGSGAQSN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
AIVAGLGAASTAGFAPDAFAAGEHAAPRLDRTIAWPSALPEIARYTKLMRRLGYDDWGDY
CEEEECCCCCCCCCCCCHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHH
LEFPLGGLDYAICRVLCEQHDLRPREYAVVHPGARMQSRRWPVARFAGVARALAERGLRI
HHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCCCHHHHHHHHHHHHHCCCEE
VLTGTRGEAALADAFAAQLGAPFVDLCGRTPLGALGALIGRSRLVVCNDTGVSHVAAALG
EEECCCCCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHC
APSVVIACGSDAARWAPLDRERHRVLADYPPCRPCMFETCPYDHACANAIGVEDVVRRAD
CCEEEEEECCCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHH
ALLAVEPHHVA
HEEECCCCCCC
>Mature Secondary Structure 
SGDPSARPAAAERRGTGEYASIAVFRALQLGDMLCAVPALRALRRGEPQARITLIGLPW
CCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCH
AKAFAERFSDYVDDFIAFPGAPGLVEQPHDVERLAAFVAECRSRRFDLAIQLHGSGAQSN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
AIVAGLGAASTAGFAPDAFAAGEHAAPRLDRTIAWPSALPEIARYTKLMRRLGYDDWGDY
CEEEECCCCCCCCCCCCHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHH
LEFPLGGLDYAICRVLCEQHDLRPREYAVVHPGARMQSRRWPVARFAGVARALAERGLRI
HHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCCCHHHHHHHHHHHHHCCCEE
VLTGTRGEAALADAFAAQLGAPFVDLCGRTPLGALGALIGRSRLVVCNDTGVSHVAAALG
EEECCCCCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHC
APSVVIACGSDAARWAPLDRERHRVLADYPPCRPCMFETCPYDHACANAIGVEDVVRRAD
CCEEEEEECCCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHH
ALLAVEPHHVA
HEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA