Definition Burkholderia pseudomallei K96243 chromosome 2, complete sequence.
Accession NC_006351
Length 3,173,005

Click here to switch to the map view.

The map label for this gene is 53723269

Identifier: 53723269

GI number: 53723269

Start: 3025134

End: 3026084

Strand: Reverse

Name: 53723269

Synonym: BPSS2251

Alternate gene names: NA

Gene position: 3026084-3025134 (Counterclockwise)

Preceding gene: 53723270

Following gene: 53723267

Centisome position: 95.37

GC content: 68.56

Gene sequence:

>951_bases
ATGTCGCCTAAGCGTTTGCGCGTGCTCACGTGGCACGTGCACGGCAACTACCTGTACTACCTGTCGCAGGCGCCGCACGA
TTTCTACGTCATCACGAAGCCGAACCATCCGCCCGGCTACGCGGGCTGCGTCGGCCATCTGCCATGGGGCGAGAACGTGC
GCGAGGTGCCGTACGAATGCGTGCCGGACGCCGAGTTCGACTGTGTGCTGTACCAGCACCATCGCCACTACGCGCACGAC
CGCGAGCACCTGCTGTCCGCCGCGCAGCGCGCGTTGCCGGCGATCTTCGTCGAGCACGATCCGCCGCGCGAACATCCGAC
CGATACGTGCCATCCGGTGCAGAACCCGAACGTGCTGCTCGTGCACGTGACGCCGTTCAACGCGCTGATGTGGGACAGCG
GCGTCACGCCGACGCGCGTGATCGAGCATGGCGTGCTGCTGCCGCGCGACGTCGTGTATCGCGGCACGCTGCCCAAGGGC
GTGACGGTCGTCAATCATCTCGTGCGGCGCGGCCGCCGGCTCGGCTCGGATTTGTTCGAGACGGTGCGGCACTTGGTGCC
GGTCGACCTGGTCGGAATGGGCTCGGCGCAGGCGGGCGGCATCGGCGAGGTGCCGAATCCGGAACTGCCGGCGTTCCTGT
CGCACTACCGCTTCTTCTTCAATCCGATTCGCTATACGAGCCTCGGGCTCGCGGTCGTCGAGGCGATGACGATCGGGCTG
CCGATCGTCGCGCTCGCGACGACCGAGATGGCGCAGCTCGTGCGTACCGGGCACAACGGCGTGGCCGACACGCGCATCGA
CGTGCTCGTCGACGCGATGCGCACGCTGATCCGCGATCCGCGGCTCGCCGCCGAATGGGGCGCGGCCGCGCGGCGCGACG
CGCTCGAGCGTTTCGGGATCGAGCGCTTCGCGCGAGACTGGGACGACGCGCTGCGCGCCGTCGCGGCATGA

Upstream 100 bases:

>100_bases
ATGTTCGAAACCTGTCCGTACGACCACGCGTGCGCGAACGCGATCGGCGTCGAGGACGTCGTCAGGCGCGCGGACGCACT
GCTCGCCGTGGAGCCGCATC

Downstream 100 bases:

>100_bases
GCGCGCGTGCGCGCCGCGCCGCCCGGTCCGTGCGCGGGCCGCGAGCCATGCGGCCCGCGCACGGCACGCGATGCGTGCGC
GGCATGCGCGACATAGGCGC

Product: LPS biosynthesis related transferase

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Group 1 Glycosyl Transferase; Lipopolysaccharide N-Acetylglucosaminyltransferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Group 1 Protein; Group 1 Glycosyl Transferase Protein; LPS Biosynthesis Related Transferase

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSPKRLRVLTWHVHGNYLYYLSQAPHDFYVITKPNHPPGYAGCVGHLPWGENVREVPYECVPDAEFDCVLYQHHRHYAHD
REHLLSAAQRALPAIFVEHDPPREHPTDTCHPVQNPNVLLVHVTPFNALMWDSGVTPTRVIEHGVLLPRDVVYRGTLPKG
VTVVNHLVRRGRRLGSDLFETVRHLVPVDLVGMGSAQAGGIGEVPNPELPAFLSHYRFFFNPIRYTSLGLAVVEAMTIGL
PIVALATTEMAQLVRTGHNGVADTRIDVLVDAMRTLIRDPRLAAEWGAAARRDALERFGIERFARDWDDALRAVAA

Sequences:

>Translated_316_residues
MSPKRLRVLTWHVHGNYLYYLSQAPHDFYVITKPNHPPGYAGCVGHLPWGENVREVPYECVPDAEFDCVLYQHHRHYAHD
REHLLSAAQRALPAIFVEHDPPREHPTDTCHPVQNPNVLLVHVTPFNALMWDSGVTPTRVIEHGVLLPRDVVYRGTLPKG
VTVVNHLVRRGRRLGSDLFETVRHLVPVDLVGMGSAQAGGIGEVPNPELPAFLSHYRFFFNPIRYTSLGLAVVEAMTIGL
PIVALATTEMAQLVRTGHNGVADTRIDVLVDAMRTLIRDPRLAAEWGAAARRDALERFGIERFARDWDDALRAVAA
>Mature_315_residues
SPKRLRVLTWHVHGNYLYYLSQAPHDFYVITKPNHPPGYAGCVGHLPWGENVREVPYECVPDAEFDCVLYQHHRHYAHDR
EHLLSAAQRALPAIFVEHDPPREHPTDTCHPVQNPNVLLVHVTPFNALMWDSGVTPTRVIEHGVLLPRDVVYRGTLPKGV
TVVNHLVRRGRRLGSDLFETVRHLVPVDLVGMGSAQAGGIGEVPNPELPAFLSHYRFFFNPIRYTSLGLAVVEAMTIGLP
IVALATTEMAQLVRTGHNGVADTRIDVLVDAMRTLIRDPRLAAEWGAAARRDALERFGIERFARDWDDALRAVAA

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35427; Mature: 35296

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPKRLRVLTWHVHGNYLYYLSQAPHDFYVITKPNHPPGYAGCVGHLPWGENVREVPYEC
CCCCEEEEEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCCEECCCCCCCHHHCCHHC
VPDAEFDCVLYQHHRHYAHDREHLLSAAQRALPAIFVEHDPPREHPTDTCHPVQNPNVLL
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCEEE
VHVTPFNALMWDSGVTPTRVIEHGVLLPRDVVYRGTLPKGVTVVNHLVRRGRRLGSDLFE
EEECCCCHHHCCCCCCHHHHHHCCCCCCHHHEECCCCCCHHHHHHHHHHHHHHCCHHHHH
TVRHLVPVDLVGMGSAQAGGIGEVPNPELPAFLSHYRFFFNPIRYTSLGLAVVEAMTIGL
HHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PIVALATTEMAQLVRTGHNGVADTRIDVLVDAMRTLIRDPRLAAEWGAAARRDALERFGI
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHH
ERFARDWDDALRAVAA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SPKRLRVLTWHVHGNYLYYLSQAPHDFYVITKPNHPPGYAGCVGHLPWGENVREVPYEC
CCCEEEEEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCCEECCCCCCCHHHCCHHC
VPDAEFDCVLYQHHRHYAHDREHLLSAAQRALPAIFVEHDPPREHPTDTCHPVQNPNVLL
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCEEE
VHVTPFNALMWDSGVTPTRVIEHGVLLPRDVVYRGTLPKGVTVVNHLVRRGRRLGSDLFE
EEECCCCHHHCCCCCCHHHHHHCCCCCCHHHEECCCCCCHHHHHHHHHHHHHHCCHHHHH
TVRHLVPVDLVGMGSAQAGGIGEVPNPELPAFLSHYRFFFNPIRYTSLGLAVVEAMTIGL
HHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PIVALATTEMAQLVRTGHNGVADTRIDVLVDAMRTLIRDPRLAAEWGAAARRDALERFGI
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHH
ERFARDWDDALRAVAA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA