| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53723095
Identifier: 53723095
GI number: 53723095
Start: 2813214
End: 2813621
Strand: Reverse
Name: 53723095
Synonym: BPSS2079
Alternate gene names: NA
Gene position: 2813621-2813214 (Counterclockwise)
Preceding gene: 53723096
Following gene: 53723094
Centisome position: 88.67
GC content: 63.24
Gene sequence:
>408_bases GTGGGGACCAAAGTGGCAACAGATACGCCGAAGAGAACTTCACGCAAAGGCATCCCGAATCACCCGATCGAATTTCGACG GCATCTGGCCAAGCTGGCCTGCGAGCCGGATATATCGGTGGCGCGTCTGGCGATGGAGCATGGGGTGAATCCGAACCGGG TGTTCAAATGGCGTCGAGCATTGCGTGCTGGCGAATACGATCCGGTGGATTTGCTGCCCGTAACCGTGGAGGCACCGGCG CAAGAGATCGAGCAACCGGCCCCGGCGCCGGTCGCCCGTGCCGCTCCGGCGGGCGCCATCGAGATCAGCGTAGGCAACAC CCGAGTGCGCATCGAAGGCTCGCCGCATGAAGCCACGCTGTTGCTGGTGCTCCGTATGTTGCGCGGCACGTCGGGACCGA CAGCATGA
Upstream 100 bases:
>100_bases TGTTTTCATTCCTGCCACGCTGCCATGGGCTGGTAAGCGTGTCCCCAGCACCGTCTCGACGATGTGAAAGGAAGTTGCCA GAGTAGACCCCACCAAAGTA
Downstream 100 bases:
>100_bases TCGGACTACCCAGCCACACGAAGATCTGGCTGGCCGCCGGCGTGACCGACATGCGCTCGGGCTTCAATCGCTTGGCTGCG AAGGTCCAGACCGTGCTGAA
Product: DNA-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MGTKVATDTPKRTSRKGIPNHPIEFRRHLAKLACEPDISVARLAMEHGVNPNRVFKWRRALRAGEYDPVDLLPVTVEAPA QEIEQPAPAPVARAAPAGAIEISVGNTRVRIEGSPHEATLLLVLRMLRGTSGPTA
Sequences:
>Translated_135_residues MGTKVATDTPKRTSRKGIPNHPIEFRRHLAKLACEPDISVARLAMEHGVNPNRVFKWRRALRAGEYDPVDLLPVTVEAPA QEIEQPAPAPVARAAPAGAIEISVGNTRVRIEGSPHEATLLLVLRMLRGTSGPTA >Mature_134_residues GTKVATDTPKRTSRKGIPNHPIEFRRHLAKLACEPDISVARLAMEHGVNPNRVFKWRRALRAGEYDPVDLLPVTVEAPAQ EIEQPAPAPVARAAPAGAIEISVGNTRVRIEGSPHEATLLLVLRMLRGTSGPTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14624; Mature: 14493
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTKVATDTPKRTSRKGIPNHPIEFRRHLAKLACEPDISVARLAMEHGVNPNRVFKWRRA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHH LRAGEYDPVDLLPVTVEAPAQEIEQPAPAPVARAAPAGAIEISVGNTRVRIEGSPHEATL HHCCCCCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCHHHH LLVLRMLRGTSGPTA HHHHHHHHCCCCCCC >Mature Secondary Structure GTKVATDTPKRTSRKGIPNHPIEFRRHLAKLACEPDISVARLAMEHGVNPNRVFKWRRA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHH LRAGEYDPVDLLPVTVEAPAQEIEQPAPAPVARAAPAGAIEISVGNTRVRIEGSPHEATL HHCCCCCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCHHHH LLVLRMLRGTSGPTA HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA