| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53723096
Identifier: 53723096
GI number: 53723096
Start: 2814054
End: 2816087
Strand: Reverse
Name: 53723096
Synonym: BPSS2080
Alternate gene names: NA
Gene position: 2816087-2814054 (Counterclockwise)
Preceding gene: 53723097
Following gene: 53723095
Centisome position: 88.75
GC content: 46.95
Gene sequence:
>2034_bases ATGGCTTCACGAGATCGCCTCAACCTGGGCACTGCTGTTCAACCCTTGACTTTAAGGAGTCGAAACATGAATGCCGGTTC AAAAAGATTTCAGCATGTCGCGTCTTCCAAGAGCTCGGGAAACGCCGAGACAGCAAGCAACTCCCGGACAAAAGGTAGCG CAAGATTCAAACCAAAGGCATTGGTCGTCGCCATGTCTATCAGCGGTTTACTTTTCGGTTATCAAGGAGAGGTTTTCGCA GAGTTGACGGCTATCTCCAGTGAGCCGGCTCCTGCAACCGATCAGGGAAATTTGGCAAGCGGCTTTAATGCGGCAGTCAC GGAGGCTCGCTCATTGGTTTTCAACCAAACAAACTATACGAGATTGTGGAATGAAAACCCAAGTTGGGCAACGAACAACT GGCCGGACGGCAAAACACTCTCATGCCCGAACCCGAACACAAATCCGACTCTTTCGCCTGGATATCTTGCTAGCCTCTAT AATCGATGCGCCTATTATTCAAGAGATTATGTCCACCAAGCCACCGGCGCTTATTATCTTGGTCTTTACGACGAAAACTA TACAATGGCCAACAAATTCGCCACGACGTATCACGAAAATGGCGGCGTTAACGCACCTTGGTGGGCAATCAGCGTTATAG GTAAGCCGTATGAGCAAAGAGATGAATTGCCCGCACCATTTGAGCTCGGCGAGAACATCGCAAACATGTATCGCCTCACG GCCGATAATCGATATCTCGGTCAGGATTTCCAAAATTACATCTCACAAATGACCAGTTACGTTAAGGCAAACAGCACTGT GGGTAGTACAACTGGAACCTCCCTCAATCCGGATGGATTTCGGATGGCACGAACGCAGAACGGCGAAACGGCATCCTATA ACGAATTTTTGCCTGATAATATGCAACTTTTACTCGGAGGAGATTTGGCGGCGAGCCAAATCGCCTACTATCGCGCCATC AAAGACAATCCTACTCTGATAGCAAAAGCTCTTAGCGACAACCCCAGTCTCAGATCGACGTACTTCTCTGACAACTATCG CAACTTGGCTTCGAAATTTGATCAAAATTGGTATATTACGAGTACCACGTCCAACCCTTCCACCACCTGTGCGTCCCCCT ATTCTCCACCCAGCGCTTTCTCCCCATTCATCCCGCACTTTGCCGTTGGGCAAGTTGGCACTCCGGGCACTTTCTACTCG AGCAATTCAAATCCAAATTATTCAAGCTTGACGTATGACGATGCCTATATAAGAGAGCCAAACATATTTCCATTATATAA GAACATCATTACCGATTCATCAAAGATGGACAACCAGGCCAGGTATGTTGATCAGCTTGAAGAAGCGAATTATATATGCG CAAACAAACAGATAGACAAGCCTGGAATTGAGTACCACACGTATCTACCCACCTCCTTCTATAATGCCAACATGCCCGAT AAGGCATGGAAATGGCTGACGAGATTGGCTAAGTGGCAAAGTAGCAGCACAAAAAGAGATAGCCAAGGAAATATCATTGG CTACAACGCCTATCCAGAGGTATCTTTCGTATTGATATCCGATACGATTACGAAGGTTCTGGGTCTTGACTATGATGCGC CGAACAGTGTGCTTTCGACGAAGAGCGGTCTTCCCTCTTCATTTGCGCCCGGCAATTATGTTACGATAAAAAATATCCCG ATTTACAACAAGGCCAAGAATACCACGATTAACGTCGACGTCACCCAGAAAATTAATTCAAATGGAGCAACTCAGACGGA TCTGGCATTCGTCACAGATTTGTCTACGGTGGCATTTAACCAAGGATTCCATTGGGCACCGAAGTTCTATAACCCCACTG GAAATCAATATTGCAAAATCACTCGCACTTATAGGAATGGAGGATCGGATAATACATTCGTGAATGTCATGACGGATAGC ACGACCAAGATTTCCACGTGCCAGGATGGCACCAATATCGGAATCTGGGTCTATACCGGACAGGGGGCCAATATTAGCTC ATACTCGGCCACCCTTTCCTCCACCAACCAATAA
Upstream 100 bases:
>100_bases ATATTCGCCACATTTCAAATAGACGACATAGATTTTTATGCGTTTCACCCGCTCATGCGGAGACGCTCCTTGATCTAGTT AAGCATTACTATTCATCTAG
Downstream 100 bases:
>100_bases TCATCCGGGTTTAGCCACAAATCCAAGATGAGTCGAGTCGACGTGCGACGAAAATTTCGCGCGTCGACTCTATCGGGTCG AAACTCCTCTCTTTGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 677; Mature: 676
Protein sequence:
>677_residues MASRDRLNLGTAVQPLTLRSRNMNAGSKRFQHVASSKSSGNAETASNSRTKGSARFKPKALVVAMSISGLLFGYQGEVFA ELTAISSEPAPATDQGNLASGFNAAVTEARSLVFNQTNYTRLWNENPSWATNNWPDGKTLSCPNPNTNPTLSPGYLASLY NRCAYYSRDYVHQATGAYYLGLYDENYTMANKFATTYHENGGVNAPWWAISVIGKPYEQRDELPAPFELGENIANMYRLT ADNRYLGQDFQNYISQMTSYVKANSTVGSTTGTSLNPDGFRMARTQNGETASYNEFLPDNMQLLLGGDLAASQIAYYRAI KDNPTLIAKALSDNPSLRSTYFSDNYRNLASKFDQNWYITSTTSNPSTTCASPYSPPSAFSPFIPHFAVGQVGTPGTFYS SNSNPNYSSLTYDDAYIREPNIFPLYKNIITDSSKMDNQARYVDQLEEANYICANKQIDKPGIEYHTYLPTSFYNANMPD KAWKWLTRLAKWQSSSTKRDSQGNIIGYNAYPEVSFVLISDTITKVLGLDYDAPNSVLSTKSGLPSSFAPGNYVTIKNIP IYNKAKNTTINVDVTQKINSNGATQTDLAFVTDLSTVAFNQGFHWAPKFYNPTGNQYCKITRTYRNGGSDNTFVNVMTDS TTKISTCQDGTNIGIWVYTGQGANISSYSATLSSTNQ
Sequences:
>Translated_677_residues MASRDRLNLGTAVQPLTLRSRNMNAGSKRFQHVASSKSSGNAETASNSRTKGSARFKPKALVVAMSISGLLFGYQGEVFA ELTAISSEPAPATDQGNLASGFNAAVTEARSLVFNQTNYTRLWNENPSWATNNWPDGKTLSCPNPNTNPTLSPGYLASLY NRCAYYSRDYVHQATGAYYLGLYDENYTMANKFATTYHENGGVNAPWWAISVIGKPYEQRDELPAPFELGENIANMYRLT ADNRYLGQDFQNYISQMTSYVKANSTVGSTTGTSLNPDGFRMARTQNGETASYNEFLPDNMQLLLGGDLAASQIAYYRAI KDNPTLIAKALSDNPSLRSTYFSDNYRNLASKFDQNWYITSTTSNPSTTCASPYSPPSAFSPFIPHFAVGQVGTPGTFYS SNSNPNYSSLTYDDAYIREPNIFPLYKNIITDSSKMDNQARYVDQLEEANYICANKQIDKPGIEYHTYLPTSFYNANMPD KAWKWLTRLAKWQSSSTKRDSQGNIIGYNAYPEVSFVLISDTITKVLGLDYDAPNSVLSTKSGLPSSFAPGNYVTIKNIP IYNKAKNTTINVDVTQKINSNGATQTDLAFVTDLSTVAFNQGFHWAPKFYNPTGNQYCKITRTYRNGGSDNTFVNVMTDS TTKISTCQDGTNIGIWVYTGQGANISSYSATLSSTNQ >Mature_676_residues ASRDRLNLGTAVQPLTLRSRNMNAGSKRFQHVASSKSSGNAETASNSRTKGSARFKPKALVVAMSISGLLFGYQGEVFAE LTAISSEPAPATDQGNLASGFNAAVTEARSLVFNQTNYTRLWNENPSWATNNWPDGKTLSCPNPNTNPTLSPGYLASLYN RCAYYSRDYVHQATGAYYLGLYDENYTMANKFATTYHENGGVNAPWWAISVIGKPYEQRDELPAPFELGENIANMYRLTA DNRYLGQDFQNYISQMTSYVKANSTVGSTTGTSLNPDGFRMARTQNGETASYNEFLPDNMQLLLGGDLAASQIAYYRAIK DNPTLIAKALSDNPSLRSTYFSDNYRNLASKFDQNWYITSTTSNPSTTCASPYSPPSAFSPFIPHFAVGQVGTPGTFYSS NSNPNYSSLTYDDAYIREPNIFPLYKNIITDSSKMDNQARYVDQLEEANYICANKQIDKPGIEYHTYLPTSFYNANMPDK AWKWLTRLAKWQSSSTKRDSQGNIIGYNAYPEVSFVLISDTITKVLGLDYDAPNSVLSTKSGLPSSFAPGNYVTIKNIPI YNKAKNTTINVDVTQKINSNGATQTDLAFVTDLSTVAFNQGFHWAPKFYNPTGNQYCKITRTYRNGGSDNTFVNVMTDST TKISTCQDGTNIGIWVYTGQGANISSYSATLSSTNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74727; Mature: 74596
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRDRLNLGTAVQPLTLRSRNMNAGSKRFQHVASSKSSGNAETASNSRTKGSARFKPKA CCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCE LVVAMSISGLLFGYQGEVFAELTAISSEPAPATDQGNLASGFNAAVTEARSLVFNQTNYT EEEEEEECCEEEECCCCEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCE RLWNENPSWATNNWPDGKTLSCPNPNTNPTLSPGYLASLYNRCAYYSRDYVHQATGAYYL EEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE GLYDENYTMANKFATTYHENGGVNAPWWAISVIGKPYEQRDELPAPFELGENIANMYRLT EEECCCCEEHHHHEEEEECCCCCCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHEEEC ADNRYLGQDFQNYISQMTSYVKANSTVGSTTGTSLNPDGFRMARTQNGETASYNEFLPDN CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHCCCCCC MQLLLGGDLAASQIAYYRAIKDNPTLIAKALSDNPSLRSTYFSDNYRNLASKFDQNWYIT CEEEECCCHHHHHHHHHEEECCCCEEEEEECCCCCCCCEEECCCHHHHHHHHCCCCEEEE STTSNPSTTCASPYSPPSAFSPFIPHFAVGQVGTPGTFYSSNSNPNYSSLTYDDAYIREP ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCEECCC NIFPLYKNIITDSSKMDNQARYVDQLEEANYICANKQIDKPGIEYHTYLPTSFYNANMPD CCCHHHHHHHCCCHHCCHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCCCCCCH KAWKWLTRLAKWQSSSTKRDSQGNIIGYNAYPEVSFVLISDTITKVLGLDYDAPNSVLST HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHCCCCCCCCHHHHC KSGLPSSFAPGNYVTIKNIPIYNKAKNTTINVDVTQKINSNGATQTDLAFVTDLSTVAFN CCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEHHHHHHHHC QGFHWAPKFYNPTGNQYCKITRTYRNGGSDNTFVNVMTDSTTKISTCQDGTNIGIWVYTG CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCEEEEECCCCCEEEEEEEEC QGANISSYSATLSSTNQ CCCCCCHHEEECCCCCC >Mature Secondary Structure ASRDRLNLGTAVQPLTLRSRNMNAGSKRFQHVASSKSSGNAETASNSRTKGSARFKPKA CCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCE LVVAMSISGLLFGYQGEVFAELTAISSEPAPATDQGNLASGFNAAVTEARSLVFNQTNYT EEEEEEECCEEEECCCCEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCE RLWNENPSWATNNWPDGKTLSCPNPNTNPTLSPGYLASLYNRCAYYSRDYVHQATGAYYL EEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE GLYDENYTMANKFATTYHENGGVNAPWWAISVIGKPYEQRDELPAPFELGENIANMYRLT EEECCCCEEHHHHEEEEECCCCCCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHEEEC ADNRYLGQDFQNYISQMTSYVKANSTVGSTTGTSLNPDGFRMARTQNGETASYNEFLPDN CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHCCCCCC MQLLLGGDLAASQIAYYRAIKDNPTLIAKALSDNPSLRSTYFSDNYRNLASKFDQNWYIT CEEEECCCHHHHHHHHHEEECCCCEEEEEECCCCCCCCEEECCCHHHHHHHHCCCCEEEE STTSNPSTTCASPYSPPSAFSPFIPHFAVGQVGTPGTFYSSNSNPNYSSLTYDDAYIREP ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCEECCC NIFPLYKNIITDSSKMDNQARYVDQLEEANYICANKQIDKPGIEYHTYLPTSFYNANMPD CCCHHHHHHHCCCHHCCHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCCCCCCH KAWKWLTRLAKWQSSSTKRDSQGNIIGYNAYPEVSFVLISDTITKVLGLDYDAPNSVLST HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHCCCCCCCCHHHHC KSGLPSSFAPGNYVTIKNIPIYNKAKNTTINVDVTQKINSNGATQTDLAFVTDLSTVAFN CCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEHHHHHHHHC QGFHWAPKFYNPTGNQYCKITRTYRNGGSDNTFVNVMTDSTTKISTCQDGTNIGIWVYTG CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCEEEEECCCCCEEEEEEEEC QGANISSYSATLSSTNQ CCCCCCHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA