| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722955
Identifier: 53722955
GI number: 53722955
Start: 2616694
End: 2617164
Strand: Reverse
Name: 53722955
Synonym: BPSS1934
Alternate gene names: NA
Gene position: 2617164-2616694 (Counterclockwise)
Preceding gene: 53722956
Following gene: 53722954
Centisome position: 82.48
GC content: 69.85
Gene sequence:
>471_bases ATGTATCAGAAGATCATGGTGGCGCTCGACGGCAGCGACATCTCGAAGCGCGGCCTCGCCGAGGCGATCAAGATCGCGAA GGCGACGCGCGGGCGCGTCCATGCGGTGTACGTCGTCGACAAGTCGGTGGTGTTCAGCTACGCGGGCCATTTCGATCCGA ACGCGCTTCTCGAAGGCTTCCGCGACGACGGCCGCAAGGCGCTCGCCGAAGCCGAGCAGGCGCTGGCCGCCGCGCAGGTA CCGGGCGACGCCGAGCTGTTCGAGACGGCCGGCATCGGCGAGGAAGTCGCGCAGGCGCTCGAGCGCTGCGCGAAGAGCAA CGGCGCCGATCTCGTCGTGCTCGGCACGCACGGGCGCCGCGGGGTGCGGCGCGTCGTGCTCGGCAGCGTCGCCGAGCGTT TCCTGCGCGCGTCGCACTGCCCGGTGCTGCTCGTGCGCGGCGACGAAGCCGAGCATCAAGTGCAGGTTTGA
Upstream 100 bases:
>100_bases CGGCAAGCGAATCCGGTGCGCGAAGCGGTTTTCCGAAGCGCGGGGAAACGCCGCAGAGCCGGGCCGCCGAAACGACATCG ACTTGAATCAGGAGGTTGGT
Downstream 100 bases:
>100_bases GCGCCGCGCGCCCCGAGAACAAGGAGAACGACATGACGCATCCTGACCGCAAGGCGATCGCCTCGACCGTCGCCGTGTTC GCCTCGCAAATCGGCCTGAT
Product: universal stress protein
Products: NA
Alternate protein names: USP MJ0531 [H]
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MYQKIMVALDGSDISKRGLAEAIKIAKATRGRVHAVYVVDKSVVFSYAGHFDPNALLEGFRDDGRKALAEAEQALAAAQV PGDAELFETAGIGEEVAQALERCAKSNGADLVVLGTHGRRGVRRVVLGSVAERFLRASHCPVLLVRGDEAEHQVQV
Sequences:
>Translated_156_residues MYQKIMVALDGSDISKRGLAEAIKIAKATRGRVHAVYVVDKSVVFSYAGHFDPNALLEGFRDDGRKALAEAEQALAAAQV PGDAELFETAGIGEEVAQALERCAKSNGADLVVLGTHGRRGVRRVVLGSVAERFLRASHCPVLLVRGDEAEHQVQV >Mature_156_residues MYQKIMVALDGSDISKRGLAEAIKIAKATRGRVHAVYVVDKSVVFSYAGHFDPNALLEGFRDDGRKALAEAEQALAAAQV PGDAELFETAGIGEEVAQALERCAKSNGADLVVLGTHGRRGVRRVVLGSVAERFLRASHCPVLLVRGDEAEHQVQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 16707; Mature: 16707
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQKIMVALDGSDISKRGLAEAIKIAKATRGRVHAVYVVDKSVVFSYAGHFDPNALLEGF CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHCCCCCHHHHHHHH RDDGRKALAEAEQALAAAQVPGDAELFETAGIGEEVAQALERCAKSNGADLVVLGTHGRR HCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCCCCH GVRRVVLGSVAERFLRASHCPVLLVRGDEAEHQVQV HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MYQKIMVALDGSDISKRGLAEAIKIAKATRGRVHAVYVVDKSVVFSYAGHFDPNALLEGF CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHCCCCCHHHHHHHH RDDGRKALAEAEQALAAAQVPGDAELFETAGIGEEVAQALERCAKSNGADLVVLGTHGRR HCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCCCCH GVRRVVLGSVAERFLRASHCPVLLVRGDEAEHQVQV HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]