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The map label for this gene is 53722956

Identifier: 53722956

GI number: 53722956

Start: 2617380

End: 2618246

Strand: Reverse

Name: 53722956

Synonym: BPSS1935

Alternate gene names: NA

Gene position: 2618246-2617380 (Counterclockwise)

Preceding gene: 53722962

Following gene: 53722955

Centisome position: 82.52

GC content: 76.7

Gene sequence:

>867_bases
ATGCGAAACCGGAACGGCGACGAGCAGGCGGCGACGGCGCGACACGAGGCGCCGGCGAGGCCGCCGCGCTGCCGTCTGCC
CGCCGATATCCGCATCAACCAGATCCTCGACGCGGCGCTCGCCGAATTCTCGGCGAGCGGCTTCGCGGGCGCGCGGATCG
ACGACATCGCCGCGCGCGCGGGGATGTCCAAGGGCGGCGTCTATACGCACTTCGGCAGCAAGGACGAGATCTTCGAGGCG
CTGCTCGCGCGTACGCTGATGCCGCCGTTGCCGGCCGCGTCGAGCGCGGTGCGCGCCGCGCGGCGCGCGCGGCGGGCGGG
CGCGGGCCCGGCTGCGCGCATGTCGGGTGCGCGGCGCGCGGCGCAGGCTTCGACGAACGGCGCGGGCGACGCCGACGAGC
GGCCCGGGCCGGGCGAGCCGCGCGAGCCGGGGGCGAGCCGCGAGCCGGGCGCGGCGGGATCGAATGCCGCGGCCGAATTT
CCGGACGCGCCGCCGCCCGTGCCCGACTCGCTCGCGGCGATCGTCGATCTGCTCACGGGCGACCTCTACACGTGGGCGAC
GAGCGAGCCGGTGATCGCGATGCTGCGTCTGCTGATCGCCGAAAGCCGGCGTGCGCCGCGCGCGGTCGAGCGCTGGCGCA
AGCATGTCGAGCAGGCGTTCGCGACGGCGGTCGGCCGGCTCGTGCGGCAGGGCGTCGACGCGGGGGAACTGCGCGACGGC
ATTGCCGCGCGCGCACCGCTCCTGCTCGTCGCGCCGCTCACGCAGGCGTGCCTGCGGCGCGCGCTGCGCGCCGCGCCGCC
GTCGCGGCGCGAGGTTGCCGCGTCGCGCCGTGACTACGCGCGCTTCATCGAGGCGCTGCTCACCTGA

Upstream 100 bases:

>100_bases
CATGCCCGATGCGGGTGCGCCCGCCGCGCGGGCCTCGCGCATCGAGAAGCGAACGACATCACGAACGGCCGCCCGTCGGG
CGGCGAAGCGGCGACAGAGC

Downstream 100 bases:

>100_bases
CGAAATGCAGGAATCCGCGCGCCGCGCGGCACAACGTTGACGGAAGTCAACTTTTCCGGCGCGGAACGCCGGATCATGAA
CCCATGTTTTCGGCACCCCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRNRNGDEQAATARHEAPARPPRCRLPADIRINQILDAALAEFSASGFAGARIDDIAARAGMSKGGVYTHFGSKDEIFEA
LLARTLMPPLPAASSAVRAARRARRAGAGPAARMSGARRAAQASTNGAGDADERPGPGEPREPGASREPGAAGSNAAAEF
PDAPPPVPDSLAAIVDLLTGDLYTWATSEPVIAMLRLLIAESRRAPRAVERWRKHVEQAFATAVGRLVRQGVDAGELRDG
IAARAPLLLVAPLTQACLRRALRAAPPSRREVAASRRDYARFIEALLT

Sequences:

>Translated_288_residues
MRNRNGDEQAATARHEAPARPPRCRLPADIRINQILDAALAEFSASGFAGARIDDIAARAGMSKGGVYTHFGSKDEIFEA
LLARTLMPPLPAASSAVRAARRARRAGAGPAARMSGARRAAQASTNGAGDADERPGPGEPREPGASREPGAAGSNAAAEF
PDAPPPVPDSLAAIVDLLTGDLYTWATSEPVIAMLRLLIAESRRAPRAVERWRKHVEQAFATAVGRLVRQGVDAGELRDG
IAARAPLLLVAPLTQACLRRALRAAPPSRREVAASRRDYARFIEALLT
>Mature_288_residues
MRNRNGDEQAATARHEAPARPPRCRLPADIRINQILDAALAEFSASGFAGARIDDIAARAGMSKGGVYTHFGSKDEIFEA
LLARTLMPPLPAASSAVRAARRARRAGAGPAARMSGARRAAQASTNGAGDADERPGPGEPREPGASREPGAAGSNAAAEF
PDAPPPVPDSLAAIVDLLTGDLYTWATSEPVIAMLRLLIAESRRAPRAVERWRKHVEQAFATAVGRLVRQGVDAGELRDG
IAARAPLLLVAPLTQACLRRALRAAPPSRREVAASRRDYARFIEALLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30452; Mature: 30452

Theoretical pI: Translated: 11.24; Mature: 11.24

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNRNGDEQAATARHEAPARPPRCRLPADIRINQILDAALAEFSASGFAGARIDDIAARA
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
GMSKGGVYTHFGSKDEIFEALLARTLMPPLPAASSAVRAARRARRAGAGPAARMSGARRA
CCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AQASTNGAGDADERPGPGEPREPGASREPGAAGSNAAAEFPDAPPPVPDSLAAIVDLLTG
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
DLYTWATSEPVIAMLRLLIAESRRAPRAVERWRKHVEQAFATAVGRLVRQGVDAGELRDG
CHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IAARAPLLLVAPLTQACLRRALRAAPPSRREVAASRRDYARFIEALLT
HHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRNRNGDEQAATARHEAPARPPRCRLPADIRINQILDAALAEFSASGFAGARIDDIAARA
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
GMSKGGVYTHFGSKDEIFEALLARTLMPPLPAASSAVRAARRARRAGAGPAARMSGARRA
CCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AQASTNGAGDADERPGPGEPREPGASREPGAAGSNAAAEFPDAPPPVPDSLAAIVDLLTG
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
DLYTWATSEPVIAMLRLLIAESRRAPRAVERWRKHVEQAFATAVGRLVRQGVDAGELRDG
CHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IAARAPLLLVAPLTQACLRRALRAAPPSRREVAASRRDYARFIEALLT
HHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA