| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is nodQ [H]
Identifier: 53722947
GI number: 53722947
Start: 2607590
End: 2608234
Strand: Reverse
Name: nodQ [H]
Synonym: BPSS1926
Alternate gene names: 53722947
Gene position: 2608234-2607590 (Counterclockwise)
Preceding gene: 53722948
Following gene: 53722946
Centisome position: 82.2
GC content: 71.16
Gene sequence:
>645_bases GTGCGCGACGCGCGTCCGGCACCGCGCCGGGACGCGTCAGCGCCGGAGAATCTCTTCTGGCAAGCCGGGCGCGTCGCCGC CGACGCGCGCTCGACCCAGTTCGGCCGCCCGCCGCTCACGCTGTGGCTCACCGGCCTGAGCGGCGCGGGCAAGTCGACGC TCGCGGGCGAACTGGAGCGGTTGCTGCTGCGCGATCGATGGCCGTGCGCGGTGCTCGACGGCGATAACCTGCGCCACCGG TTGAACCGCGATCTCGGCTTCGGCGCCGAAGACCGCCACGAGAACATCCGGCGCACCGCCGAGGTCGCGCGGCTGATGAA CGGCGTCGGGCTCGTCGTCATCGCTTCGCTGATCTCGCCGTTTCGCGACGATCGCGCGATGGCGCGCGACATCGTGGGCA GCGACTGGTTCAGCGAGGTTTACGTGAGCACGCCGCTCGACGAATGCGAGCGGCGCGATCCGAAAGGGCTGTATCGCAAG GCGCGCGGCGGCCTGCTGCCGAACTTCACCGGCGTGTCCGCGCCGTACGAACCGCCGGTATCCGCCGATCTCGCGATCGA CACCACGCGGCTGTCGGTCGACGCCGCTGCGGCGATGTTGCGCGCGCACCTGATCGCGCGCTGCGCAGGCCGCCATGTCG ATTGA
Upstream 100 bases:
>100_bases CCGCGCCGCCCGTCCATCGCAAGGAATCCCGATCATGTCAGCTTCATCGCCTTCGCGTGCGCGGCCGGGCGCACGCCCGC ACGACGGCGCGCCCGCGCCC
Downstream 100 bases:
>100_bases ACGCCCGCTCGACTGGTTCCGGCGTCTGCAGTGCTTCGTGTGCGAGCGGCGCTTCAATCAACGATGCGACCGGCATTTGC TCGTCGCCCTCGTGCGCAGC
Product: denylylsulfate kinase
Products: NA
Alternate protein names: Nodulation protein Q; Sulfate adenylyltransferase subunit 1; ATP-sulfurylase large subunit; Sulfate adenylate transferase; SAT; Adenylyl-sulfate kinase; APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase [H]
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MRDARPAPRRDASAPENLFWQAGRVAADARSTQFGRPPLTLWLTGLSGAGKSTLAGELERLLLRDRWPCAVLDGDNLRHR LNRDLGFGAEDRHENIRRTAEVARLMNGVGLVVIASLISPFRDDRAMARDIVGSDWFSEVYVSTPLDECERRDPKGLYRK ARGGLLPNFTGVSAPYEPPVSADLAIDTTRLSVDAAAAMLRAHLIARCAGRHVD
Sequences:
>Translated_214_residues MRDARPAPRRDASAPENLFWQAGRVAADARSTQFGRPPLTLWLTGLSGAGKSTLAGELERLLLRDRWPCAVLDGDNLRHR LNRDLGFGAEDRHENIRRTAEVARLMNGVGLVVIASLISPFRDDRAMARDIVGSDWFSEVYVSTPLDECERRDPKGLYRK ARGGLLPNFTGVSAPYEPPVSADLAIDTTRLSVDAAAAMLRAHLIARCAGRHVD >Mature_214_residues MRDARPAPRRDASAPENLFWQAGRVAADARSTQFGRPPLTLWLTGLSGAGKSTLAGELERLLLRDRWPCAVLDGDNLRHR LNRDLGFGAEDRHENIRRTAEVARLMNGVGLVVIASLISPFRDDRAMARDIVGSDWFSEVYVSTPLDECERRDPKGLYRK ARGGLLPNFTGVSAPYEPPVSADLAIDTTRLSVDAAAAMLRAHLIARCAGRHVD
Specific function: APS kinase catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI46094058, Length=184, Percent_Identity=47.8260869565217, Blast_Score=161, Evalue=3e-40, Organism=Homo sapiens, GI62912492, Length=199, Percent_Identity=44.7236180904523, Blast_Score=160, Evalue=9e-40, Organism=Homo sapiens, GI34447231, Length=199, Percent_Identity=44.7236180904523, Blast_Score=160, Evalue=9e-40, Organism=Escherichia coli, GI1789107, Length=185, Percent_Identity=49.1891891891892, Blast_Score=177, Evalue=4e-46, Organism=Caenorhabditis elegans, GI17542422, Length=197, Percent_Identity=45.1776649746193, Blast_Score=172, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6322852, Length=192, Percent_Identity=44.2708333333333, Blast_Score=165, Evalue=6e-42, Organism=Drosophila melanogaster, GI24667032, Length=163, Percent_Identity=50.3067484662577, Blast_Score=158, Evalue=3e-39, Organism=Drosophila melanogaster, GI24667028, Length=163, Percent_Identity=50.3067484662577, Blast_Score=158, Evalue=3e-39, Organism=Drosophila melanogaster, GI24667036, Length=163, Percent_Identity=50.3067484662577, Blast_Score=158, Evalue=3e-39, Organism=Drosophila melanogaster, GI116007838, Length=163, Percent_Identity=50.3067484662577, Blast_Score=158, Evalue=3e-39, Organism=Drosophila melanogaster, GI24667044, Length=163, Percent_Identity=50.3067484662577, Blast_Score=158, Evalue=3e-39, Organism=Drosophila melanogaster, GI24667040, Length=163, Percent_Identity=50.3067484662577, Blast_Score=157, Evalue=4e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 - InterPro: IPR000795 - InterPro: IPR011779 - InterPro: IPR009001 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF01583 APS_kinase; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: =2.7.7.4; =2.7.1.25 [H]
Molecular weight: Translated: 23554; Mature: 23554
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDARPAPRRDASAPENLFWQAGRVAADARSTQFGRPPLTLWLTGLSGAGKSTLAGELER CCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHH LLLRDRWPCAVLDGDNLRHRLNRDLGFGAEDRHENIRRTAEVARLMNGVGLVVIASLISP HHHHCCCCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH FRDDRAMARDIVGSDWFSEVYVSTPLDECERRDPKGLYRKARGGLLPNFTGVSAPYEPPV HHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC SADLAIDTTRLSVDAAAAMLRAHLIARCAGRHVD CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRDARPAPRRDASAPENLFWQAGRVAADARSTQFGRPPLTLWLTGLSGAGKSTLAGELER CCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHH LLLRDRWPCAVLDGDNLRHRLNRDLGFGAEDRHENIRRTAEVARLMNGVGLVVIASLISP HHHHCCCCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH FRDDRAMARDIVGSDWFSEVYVSTPLDECERRDPKGLYRKARGGLLPNFTGVSAPYEPPV HHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC SADLAIDTTRLSVDAAAAMLRAHLIARCAGRHVD CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8755625; 8850086 [H]