Click here to switch to the map view.

The map label for this gene is tse [H]

Identifier: 53722948

GI number: 53722948

Start: 2608475

End: 2610166

Strand: Reverse

Name: tse [H]

Synonym: BPSS1927

Alternate gene names: 53722948

Gene position: 2610166-2608475 (Counterclockwise)

Preceding gene: 53722950

Following gene: 53722947

Centisome position: 82.26

GC content: 68.68

Gene sequence:

>1692_bases
ATGATGGGATTCGCACACATGAAGGTCGCCACCCGCCTCGGGATCGGCTTCGCGCTGGTCGCCTGTCTGCTTGCGGTGAT
GGTCGCGTTCGCACTGGACAGGATGGCGAAGTTCGAAGGCTGGATGGTCGAGATCACCGAAGTAAACAGCGTGGAGGCGA
AGCTGGCCGCGAAGCTCGAACTGAGCATTACCGAGCGCGCGCTCGCGCTGCGCAACCTGATCCTGCTCGATCGGCAGGAC
GAAATGCAGATCGAGCAGGATCGGATCGACGCGAAGGCGAAGCTCTACAGGCAATCGCGAGACAGGCTCGCGACGATGTT
CGCGACGCTCGACGGCACGCCGCAGGAGCGCGCGCTGCTCGAACAGATAGGCCAGCAGGGCGACGCCGCCGACGGCTTCA
TCGCACGTGCGAGGACGATGATTCTCGCGGGGCAGAAGGACGATGCGTACAAGCTGCTGCGCTTCGAATTCCGCCCGGTG
CAGGCGAAATGGTGGGCGCTCACGCGCGAGCTGAAGGCGCTGGAGGAGAAGCAGAACGAGGAGGCGACCCTGCACGCGAA
GGCGGCCTACGAAGAAAGCCGCACGTGGATGCTCGTGCTCGGCGCGCTCGCGCTGGTGTCGAGCGTGGTGTCCGCGTGGC
TGATCACGCGCGGCATCGTGCGCCAGCTCGGCGGCGAGCCGTGCGACGCCGCTCACGCGGCGAACATGATCGCCGCGGGC
GACCTGAGCGTGGCGATCGGCGTGCGCGACGGTGACGAAGCGAGCCTCATGCACGCGATGAAATCGATGCGCGACAGCCT
CGCGGAGATCGTGAGCCAGGTGCACGTGAGCGCCGACACGATCGCGACCGCATCCGGGCAGATCGCGAGCGGCAATCTCG
ACCTGTCCGCGCGCACCGAGCAACAGGCGGCGTCGCTCGAGGAAACCGCGGCGTCGATGGAGCAACTGACCGCGACCGTT
CAGCAGAACACCGACAACTCGCGCCAGGCGGACACGCTCGCGGCGTCCGCGTCGCACGTCGCGGAGAAGGGCGGCACGGC
GGTGACGCAGGTCGTCGATGCGATGGGCTCGATTCATGCGACGGCGCAGAAGATCGTCGAGATCATCGGCGTGATCGACG
GCATCGCGTTCCAGACCAACATCCTCGCGCTGAACGCGGCCGTCGAGGCGGCGCGCGCGGGCGAGCAGGGCCGCGGCTTC
GCCGTTGTCGCATCGGAGGTGCGCAGCCTCGCGCAGCGCTCGGCGACAGCCGCGCGCGAAATCAAGGAGCTGATCGGCGG
CTCGGTCGTGCAGGTCGAGGCCGGCGACCGTCTCGCGAAGGAAGCGGGCGCGACGATGCACGAAGTCGTCGAGAGTATCC
GGCGCGTGACGCTGATCATGGCCGAGATCACGCGCGCGAGCGAGCAGCAGACGAGCGGCATCGTCGAGATCGATCGCGCG
ATCACGCAGATGGATCAGGTCACGCAGCAGAACGCCTCGCTCGTCGAGGAGGCGGCCGCCGCGGCCGAATCGATGCGCGA
GCAGTCCGCCGCGCTCGTGCGCGCGGTGCGCGTGTTCAAGCTGGACGCGTATCCGGCCGTAGCGTCGAGCCGCGCCGCAC
CGCCCGCGCGGCCCGCGCGCGTCGCGAGCTTCGACGCCGGGGCGAGCGTGGCCGCGCATGCCGCGCCGCGACTGGCGCGC
ATCGCGCCCTGA

Upstream 100 bases:

>100_bases
TATCCAGGAACGGCACGACGGCCCGTCGTTCAGGGCTGCCGACAAAAACCGCCGACGCTTCCGGGGTTCGACGAGCGATC
GGTTATACGGGTCAGGAGAG

Downstream 100 bases:

>100_bases
GCGCAGCCGAAGGCTGCGTCACATGAGCGTGCCTTGGCGGGCCTTCGGCTGTTTCTCGGCTGTTTGCCGGTGGTTTGCCA
GAAATGTGCCGGTAGTTTGT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MMGFAHMKVATRLGIGFALVACLLAVMVAFALDRMAKFEGWMVEITEVNSVEAKLAAKLELSITERALALRNLILLDRQD
EMQIEQDRIDAKAKLYRQSRDRLATMFATLDGTPQERALLEQIGQQGDAADGFIARARTMILAGQKDDAYKLLRFEFRPV
QAKWWALTRELKALEEKQNEEATLHAKAAYEESRTWMLVLGALALVSSVVSAWLITRGIVRQLGGEPCDAAHAANMIAAG
DLSVAIGVRDGDEASLMHAMKSMRDSLAEIVSQVHVSADTIATASGQIASGNLDLSARTEQQAASLEETAASMEQLTATV
QQNTDNSRQADTLAASASHVAEKGGTAVTQVVDAMGSIHATAQKIVEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGF
AVVASEVRSLAQRSATAAREIKELIGGSVVQVEAGDRLAKEAGATMHEVVESIRRVTLIMAEITRASEQQTSGIVEIDRA
ITQMDQVTQQNASLVEEAAAAAESMREQSAALVRAVRVFKLDAYPAVASSRAAPPARPARVASFDAGASVAAHAAPRLAR
IAP

Sequences:

>Translated_563_residues
MMGFAHMKVATRLGIGFALVACLLAVMVAFALDRMAKFEGWMVEITEVNSVEAKLAAKLELSITERALALRNLILLDRQD
EMQIEQDRIDAKAKLYRQSRDRLATMFATLDGTPQERALLEQIGQQGDAADGFIARARTMILAGQKDDAYKLLRFEFRPV
QAKWWALTRELKALEEKQNEEATLHAKAAYEESRTWMLVLGALALVSSVVSAWLITRGIVRQLGGEPCDAAHAANMIAAG
DLSVAIGVRDGDEASLMHAMKSMRDSLAEIVSQVHVSADTIATASGQIASGNLDLSARTEQQAASLEETAASMEQLTATV
QQNTDNSRQADTLAASASHVAEKGGTAVTQVVDAMGSIHATAQKIVEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGF
AVVASEVRSLAQRSATAAREIKELIGGSVVQVEAGDRLAKEAGATMHEVVESIRRVTLIMAEITRASEQQTSGIVEIDRA
ITQMDQVTQQNASLVEEAAAAAESMREQSAALVRAVRVFKLDAYPAVASSRAAPPARPARVASFDAGASVAAHAAPRLAR
IAP
>Mature_563_residues
MMGFAHMKVATRLGIGFALVACLLAVMVAFALDRMAKFEGWMVEITEVNSVEAKLAAKLELSITERALALRNLILLDRQD
EMQIEQDRIDAKAKLYRQSRDRLATMFATLDGTPQERALLEQIGQQGDAADGFIARARTMILAGQKDDAYKLLRFEFRPV
QAKWWALTRELKALEEKQNEEATLHAKAAYEESRTWMLVLGALALVSSVVSAWLITRGIVRQLGGEPCDAAHAANMIAAG
DLSVAIGVRDGDEASLMHAMKSMRDSLAEIVSQVHVSADTIATASGQIASGNLDLSARTEQQAASLEETAASMEQLTATV
QQNTDNSRQADTLAASASHVAEKGGTAVTQVVDAMGSIHATAQKIVEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGF
AVVASEVRSLAQRSATAAREIKELIGGSVVQVEAGDRLAKEAGATMHEVVESIRRVTLIMAEITRASEQQTSGIVEIDRA
ITQMDQVTQQNASLVEEAAAAAESMREQSAALVRAVRVFKLDAYPAVASSRAAPPARPARVASFDAGASVAAHAAPRLAR
IAP

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=567, Percent_Identity=38.6243386243386, Blast_Score=282, Evalue=4e-77,
Organism=Escherichia coli, GI2367378, Length=404, Percent_Identity=47.029702970297, Blast_Score=277, Evalue=1e-75,
Organism=Escherichia coli, GI1788195, Length=328, Percent_Identity=53.3536585365854, Blast_Score=277, Evalue=1e-75,
Organism=Escherichia coli, GI1788194, Length=386, Percent_Identity=47.1502590673575, Blast_Score=276, Evalue=3e-75,
Organism=Escherichia coli, GI1789453, Length=323, Percent_Identity=37.4613003095975, Blast_Score=192, Evalue=7e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 60088; Mature: 60088

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS00538 CHEMOTAXIS_TRANSDUC_1 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGFAHMKVATRLGIGFALVACLLAVMVAFALDRMAKFEGWMVEITEVNSVEAKLAAKLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
LSITERALALRNLILLDRQDEMQIEQDRIDAKAKLYRQSRDRLATMFATLDGTPQERALL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
EQIGQQGDAADGFIARARTMILAGQKDDAYKLLRFEFRPVQAKWWALTRELKALEEKQNE
HHHCCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
EATLHAKAAYEESRTWMLVLGALALVSSVVSAWLITRGIVRQLGGEPCDAAHAANMIAAG
CCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCEEEEC
DLSVAIGVRDGDEASLMHAMKSMRDSLAEIVSQVHVSADTIATASGQIASGNLDLSARTE
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCH
QQAASLEETAASMEQLTATVQQNTDNSRQADTLAASASHVAEKGGTAVTQVVDAMGSIHA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TAQKIVEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAARE
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IKELIGGSVVQVEAGDRLAKEAGATMHEVVESIRRVTLIMAEITRASEQQTSGIVEIDRA
HHHHHCCCEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ITQMDQVTQQNASLVEEAAAAAESMREQSAALVRAVRVFKLDAYPAVASSRAAPPARPAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC
VASFDAGASVAAHAAPRLARIAP
EECCCCCCHHHHHHCCCHHCCCC
>Mature Secondary Structure
MMGFAHMKVATRLGIGFALVACLLAVMVAFALDRMAKFEGWMVEITEVNSVEAKLAAKLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
LSITERALALRNLILLDRQDEMQIEQDRIDAKAKLYRQSRDRLATMFATLDGTPQERALL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
EQIGQQGDAADGFIARARTMILAGQKDDAYKLLRFEFRPVQAKWWALTRELKALEEKQNE
HHHCCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
EATLHAKAAYEESRTWMLVLGALALVSSVVSAWLITRGIVRQLGGEPCDAAHAANMIAAG
CCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCEEEEC
DLSVAIGVRDGDEASLMHAMKSMRDSLAEIVSQVHVSADTIATASGQIASGNLDLSARTE
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCH
QQAASLEETAASMEQLTATVQQNTDNSRQADTLAASASHVAEKGGTAVTQVVDAMGSIHA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TAQKIVEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAARE
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IKELIGGSVVQVEAGDRLAKEAGATMHEVVESIRRVTLIMAEITRASEQQTSGIVEIDRA
HHHHHCCCEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ITQMDQVTQQNASLVEEAAAAAESMREQSAALVRAVRVFKLDAYPAVASSRAAPPARPAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC
VASFDAGASVAAHAAPRLARIAP
EECCCCCCHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]