| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722908
Identifier: 53722908
GI number: 53722908
Start: 2562759
End: 2563256
Strand: Reverse
Name: 53722908
Synonym: BPSS1887
Alternate gene names: NA
Gene position: 2563256-2562759 (Counterclockwise)
Preceding gene: 53722909
Following gene: 53722907
Centisome position: 80.78
GC content: 64.26
Gene sequence:
>498_bases ATGACCGACATCACCGACGGCCTCACCGGCGACATTCGCACGTGGTTCGAGCTGCACATGCTGCAGAACCGCTACATCGG GCATCTCGACAACGATCGCCTCGAACGCTGGCCCGAGCTGTTCACCGAAGACTGCCTGTACGAGATCGTGCCGAAGGAAA ACGCGGACCTGGGGCTGCCGATCGGCATCGTTTACTGCACGAACCGGCGGATGCTGCGCGATCGCGTCGTGTCGCTGCGC CACGCGAACATCTACGAAGCGCACACGTACCGGCACATGACGTCCGGGCTCACGATCGTCGGCGGCGAAGGCGGCGAGAT CGAGACCGAGAGCAGCTACGTCGTCGTGCAGACGCGCAGCGACGGCGAATCGAACGTCTACCAGGCGGGCAAGTACTACG ACACGGTCGTGCGCACGGCCGAGGGGCTGCGCTACCGGAAGAAGCGCGTGATTTACGACACGTCGCGCGTGCAGACGCTG CTCGCGACGCCGATCTGA
Upstream 100 bases:
>100_bases GCAATCCGGACCAGCAGGACACGGCGATCACCGAGAGCCTGATCCGCAGGTTCTGGGTCGGCTACCAGCAGTTGATGGGC TATTGAAGCGGGAGACGAAC
Downstream 100 bases:
>100_bases TTCTTGCAAGGAGTTCGAAGCATGAGCAACGAAACCGCTGCCGCGTGGCACACGCTCGGCGCACTCGACGAATTCTCCGA GGACGAGCCGGCCGCGCGCG
Product: aromatic oxygenase
Products: NA
Alternate protein names: Anthranilate Dioxygenase Small Subunit; Ring Hydroxylating Beta Subunit; Ring Hydroxylating Subunit Beta Family; Salicylate-5-Hydroxylase Small Oxygenase Component; Aromatic-Ring-Hydroxylating Dioxygenase Subunit Beta; Ring Dioxygenase Beta Subunit; Ring Hydroxylating Subunit Beta; Oxygenase; Ring-Hydroxylating Dioxygenase Beta Subunit; Aromatic-Ring Hydroxylating Dioxygenase Beta-Subunit; Small Subunit Aromatic Oxygenase; Ortho-Halobenzoate-12-Dioxygenase Beta Subunit; Small Subunit Of Anthranilate Dioxygenase; Dioxygenase System Beta Subunit; Oxygenase Small Subunit Of Terephthalate 1 2-Dioxygenase; Aromatic Ring Dioxygenase Beta Subunit; Dioxygenase; Aromatic Dioxygenase Beta Subunit; Terephthalate 12-Dioxygenase Small Subunit
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTDITDGLTGDIRTWFELHMLQNRYIGHLDNDRLERWPELFTEDCLYEIVPKENADLGLPIGIVYCTNRRMLRDRVVSLR HANIYEAHTYRHMTSGLTIVGGEGGEIETESSYVVVQTRSDGESNVYQAGKYYDTVVRTAEGLRYRKKRVIYDTSRVQTL LATPI
Sequences:
>Translated_165_residues MTDITDGLTGDIRTWFELHMLQNRYIGHLDNDRLERWPELFTEDCLYEIVPKENADLGLPIGIVYCTNRRMLRDRVVSLR HANIYEAHTYRHMTSGLTIVGGEGGEIETESSYVVVQTRSDGESNVYQAGKYYDTVVRTAEGLRYRKKRVIYDTSRVQTL LATPI >Mature_164_residues TDITDGLTGDIRTWFELHMLQNRYIGHLDNDRLERWPELFTEDCLYEIVPKENADLGLPIGIVYCTNRRMLRDRVVSLRH ANIYEAHTYRHMTSGLTIVGGEGGEIETESSYVVVQTRSDGESNVYQAGKYYDTVVRTAEGLRYRKKRVIYDTSRVQTLL ATPI
Specific function: Unknown
COG id: COG5517
COG function: function code Q; Small subunit of phenylpropionate dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19065; Mature: 18934
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDITDGLTGDIRTWFELHMLQNRYIGHLDNDRLERWPELFTEDCLYEIVPKENADLGLP CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC IGIVYCTNRRMLRDRVVSLRHANIYEAHTYRHMTSGLTIVGGEGGEIETESSYVVVQTRS EEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCEECCCCEEEEEECC DGESNVYQAGKYYDTVVRTAEGLRYRKKRVIYDTSRVQTLLATPI CCCCCHHHCCHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHCCCC >Mature Secondary Structure TDITDGLTGDIRTWFELHMLQNRYIGHLDNDRLERWPELFTEDCLYEIVPKENADLGLP CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC IGIVYCTNRRMLRDRVVSLRHANIYEAHTYRHMTSGLTIVGGEGGEIETESSYVVVQTRS EEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCEECCCCEEEEEECC DGESNVYQAGKYYDTVVRTAEGLRYRKKRVIYDTSRVQTLLATPI CCCCCHHHCCHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA