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The map label for this gene is yfmJ [H]

Identifier: 53722871

GI number: 53722871

Start: 2516831

End: 2517847

Strand: Reverse

Name: yfmJ [H]

Synonym: BPSS1852

Alternate gene names: 53722871

Gene position: 2517847-2516831 (Counterclockwise)

Preceding gene: 53722872

Following gene: 53722869

Centisome position: 79.35

GC content: 70.21

Gene sequence:

>1017_bases
ATGTCCACACCCGTCAATCGACAACTGCGCCTGAAGGCGCGCCCCGACGGACGCGTCGGTCACGAGCACTTCACGCTCGC
CGAAGCGCCGCTGCCCCCGCTCGGGCCGGGCGAGATGCTCGTGCGCGTGCTGTATCTGTCGATGGATCCCACCAATCGCG
TCTGGATGAGCGACATCCCGCAATATCTGCCGCCGGTGGCGATCGGCGACGTGATGCGCGCGCTCGGGATCGGCCGCGTC
GTCGCGTCGAACGCGCCGGGGTTCGCCGAGGGCGATCTCGTGCAGGGGCTCGTCGGCTGGCAGGACTACGCGCACGTGCG
CGCCGACGAAATCGCGCAGTACACGAAGCTGCCCGCCGCGCTCGGCCTGCCGCTGCCGCGCCTGCTCGGCGCATGCGGGA
TGAGCGGGCTCACCGCGTACTACGGGCTCACCGAGATCGCGCCGGTGCAGCCGGGCGAGACGCTCGTCGTGTCGGCGGCC
GCGGGCTCGGTGGGCTCCGTCGCCGGGCAGATCGGCAAGATTCACGGCACGCGCGTCGTCGGCATCGCGGGCGGCGCGGA
CAAGTGCCGCTACCTGACCGACGAACTCGGCTTCGACGCGGCCGTCGACTACAAGTCCGACGACTGGAAGCGCGCGCTGA
AGGACGCGACGCCCGACGGCGTGCACGTGAGCTTCGAGAACGTCGGCGGCGAGATCATGCGCGCGGTGCTGTCGCGAATG
GCGATCGGCGGACGCGTCGCGCTGTGCGGCGTGATCGCGAACTACAACAGCGGGCGGCCCGCCGACGACGTCAGCGTGTT
GATCGCGAAGCGGCTGACGATGCGCGGCTTCCTGATTCTCGATTACCGGAAGAGCCGCGAGGCGATCGCGACGCTCGCCG
GCTGGCTGCGCGACGGCCGGCTGAAGGCGGAGGAAACCGTCGCCGACGGGCTGACCAACGCGCCCGACGTGCTGAATCGC
CTGTTTGACGGCAGCCATCGCGGCAAGCTCGTGCTGCGGGTCGATCCGCAAGCTTGA

Upstream 100 bases:

>100_bases
CGCGCCTCGCGCCTCGCGCGAATGCGACCGCGGCGCACTCGCGGCGTTCGCCGATGCGGGCGCATGCCGTCCGTTTCCAT
TTCTCCCGAAGGTGATGCCC

Downstream 100 bases:

>100_bases
TCGGGCGGCGGCGCGCGCTTTGGCCGATGCTGCCGCTTCGGCTGCTTCGGCTGCTTCGGCTGCTTCGGCTGCTTCGACCG
CTTCGACTGCTTCGACTGCT

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSTPVNRQLRLKARPDGRVGHEHFTLAEAPLPPLGPGEMLVRVLYLSMDPTNRVWMSDIPQYLPPVAIGDVMRALGIGRV
VASNAPGFAEGDLVQGLVGWQDYAHVRADEIAQYTKLPAALGLPLPRLLGACGMSGLTAYYGLTEIAPVQPGETLVVSAA
AGSVGSVAGQIGKIHGTRVVGIAGGADKCRYLTDELGFDAAVDYKSDDWKRALKDATPDGVHVSFENVGGEIMRAVLSRM
AIGGRVALCGVIANYNSGRPADDVSVLIAKRLTMRGFLILDYRKSREAIATLAGWLRDGRLKAEETVADGLTNAPDVLNR
LFDGSHRGKLVLRVDPQA

Sequences:

>Translated_338_residues
MSTPVNRQLRLKARPDGRVGHEHFTLAEAPLPPLGPGEMLVRVLYLSMDPTNRVWMSDIPQYLPPVAIGDVMRALGIGRV
VASNAPGFAEGDLVQGLVGWQDYAHVRADEIAQYTKLPAALGLPLPRLLGACGMSGLTAYYGLTEIAPVQPGETLVVSAA
AGSVGSVAGQIGKIHGTRVVGIAGGADKCRYLTDELGFDAAVDYKSDDWKRALKDATPDGVHVSFENVGGEIMRAVLSRM
AIGGRVALCGVIANYNSGRPADDVSVLIAKRLTMRGFLILDYRKSREAIATLAGWLRDGRLKAEETVADGLTNAPDVLNR
LFDGSHRGKLVLRVDPQA
>Mature_337_residues
STPVNRQLRLKARPDGRVGHEHFTLAEAPLPPLGPGEMLVRVLYLSMDPTNRVWMSDIPQYLPPVAIGDVMRALGIGRVV
ASNAPGFAEGDLVQGLVGWQDYAHVRADEIAQYTKLPAALGLPLPRLLGACGMSGLTAYYGLTEIAPVQPGETLVVSAAA
GSVGSVAGQIGKIHGTRVVGIAGGADKCRYLTDELGFDAAVDYKSDDWKRALKDATPDGVHVSFENVGGEIMRAVLSRMA
IGGRVALCGVIANYNSGRPADDVSVLIAKRLTMRGFLILDYRKSREAIATLAGWLRDGRLKAEETVADGLTNAPDVLNRL
FDGSHRGKLVLRVDPQA

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226246682, Length=348, Percent_Identity=35.9195402298851, Blast_Score=192, Evalue=3e-49,
Organism=Homo sapiens, GI226246680, Length=348, Percent_Identity=35.9195402298851, Blast_Score=192, Evalue=3e-49,
Organism=Homo sapiens, GI22748929, Length=348, Percent_Identity=35.9195402298851, Blast_Score=192, Evalue=3e-49,
Organism=Homo sapiens, GI226059159, Length=335, Percent_Identity=34.3283582089552, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI226059133, Length=335, Percent_Identity=34.3283582089552, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI226056130, Length=307, Percent_Identity=35.5048859934853, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI28557745, Length=334, Percent_Identity=27.8443113772455, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI22538446, Length=276, Percent_Identity=27.536231884058, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI22538444, Length=276, Percent_Identity=27.536231884058, Blast_Score=69, Evalue=5e-12,
Organism=Escherichia coli, GI226510941, Length=338, Percent_Identity=40.8284023668639, Blast_Score=247, Evalue=6e-67,
Organism=Caenorhabditis elegans, GI133901710, Length=314, Percent_Identity=35.6687898089172, Blast_Score=170, Evalue=8e-43,
Organism=Caenorhabditis elegans, GI133901712, Length=314, Percent_Identity=35.6687898089172, Blast_Score=170, Evalue=1e-42,
Organism=Saccharomyces cerevisiae, GI6323504, Length=335, Percent_Identity=29.2537313432836, Blast_Score=129, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36043; Mature: 35912

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPVNRQLRLKARPDGRVGHEHFTLAEAPLPPLGPGEMLVRVLYLSMDPTNRVWMSDIP
CCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH
QYLPPVAIGDVMRALGIGRVVASNAPGFAEGDLVQGLVGWQDYAHVRADEIAQYTKLPAA
HHCCCHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LGLPLPRLLGACGMSGLTAYYGLTEIAPVQPGETLVVSAAAGSVGSVAGQIGKIHGTRVV
HCCCHHHHHHHHCCCHHHHHHCCHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEE
GIAGGADKCRYLTDELGFDAAVDYKSDDWKRALKDATPDGVHVSFENVGGEIMRAVLSRM
EECCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCEEEEHHHCCHHHHHHHHHHH
AIGGRVALCGVIANYNSGRPADDVSVLIAKRLTMRGFLILDYRKSREAIATLAGWLRDGR
HCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHCCC
LKAEETVADGLTNAPDVLNRLFDGSHRGKLVLRVDPQA
CCHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCC
>Mature Secondary Structure 
STPVNRQLRLKARPDGRVGHEHFTLAEAPLPPLGPGEMLVRVLYLSMDPTNRVWMSDIP
CCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH
QYLPPVAIGDVMRALGIGRVVASNAPGFAEGDLVQGLVGWQDYAHVRADEIAQYTKLPAA
HHCCCHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LGLPLPRLLGACGMSGLTAYYGLTEIAPVQPGETLVVSAAAGSVGSVAGQIGKIHGTRVV
HCCCHHHHHHHHCCCHHHHHHCCHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEE
GIAGGADKCRYLTDELGFDAAVDYKSDDWKRALKDATPDGVHVSFENVGGEIMRAVLSRM
EECCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCEEEEHHHCCHHHHHHHHHHH
AIGGRVALCGVIANYNSGRPADDVSVLIAKRLTMRGFLILDYRKSREAIATLAGWLRDGR
HCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHCCC
LKAEETVADGLTNAPDVLNRLFDGSHRGKLVLRVDPQA
CCHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]