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The map label for this gene is cirA [C]

Identifier: 53722869

GI number: 53722869

Start: 2512421

End: 2514517

Strand: Reverse

Name: cirA [C]

Synonym: BPSS1850

Alternate gene names: 53722869

Gene position: 2514517-2512421 (Counterclockwise)

Preceding gene: 53722871

Following gene: 53722868

Centisome position: 79.25

GC content: 71.39

Gene sequence:

>2097_bases
ATGGATGACCACCGACGTATCGCGCCGCCTTTCGCTCGCAGGCTGCATCCCTTGTCGCTGCTGCTCGCCGCGAGCCTCGC
GCATGGCGAGACGGGCGCGCCGCCCGCCGAGCGCCGATCGGACGCGCCGCCCGCGACGGCGCTCGCGCCGATCTTCGTGA
CCGCGAACCCGCTCGGCGCGTCGGCGCTGAGCTCGCCCACCGCGTCGCTGTCCGGCGACGCGCTGACGCTGCGCCGCACC
GATTCGCTCGGCGACACGCTGAACGGCCTGCCCGGCGTGTCCACGACGACCTATGGCCCGCTCGTCGGCCGTCCGATCAT
CCGCGGGATGGACGGCGATCGCATCCGCCTCCTGCAGAACGGCGTCGCCGCGTACGACGCGTCGTCGCTGTCCTACGATC
ACGCGGTGCCGCAGGATCCGCTGAGCGTCGAGCGCATCGAGATCGTGCGCGGGCCGGCGGCGTTGCTGTACGGCGGCAAC
GCGGTCGGCGGCGTCGTCAACACGATCGACAACCGGATTCCGCGCGAAGCGATCACGGGCGTCTCGGGCGCGCTCGACGC
GAGCTACGGCGGCGCGAACAATGCGCGTGCGGGCGCGGCGCTCGTCGAAGGCGGCAACGGCCGCTTCGCGTTTCATCTCG
ACGCGTTCGGCCGCGAGACCGACGCGCTGCGGATTCCGGGCCATGCGCATTCGGCGCGCCAGCGCGCGCTCGACGGCGAG
GACGCCAGCGAGCCGTACGGCAAGCTGCCGAACAGCGACGGCCGCCGTTACGGCGGCGCGGCGGGCGGCTCGTACACGTG
GGCGGACGGCTACGTCGGCGCATCGTACAGCGGCTACGAATCGAACTACGGCTCCGTCGCCGAAACCGACGCGCGGCTTC
AGATGCGGCAGGAGCGCGTCGCGCTCGCGTCGGAGGTGCGCAATCTGCGCGGGCCGTTCTCGCAGCTGAAATTCGACTTC
GGCTACACGAATTACCAGCATAAGGAAATCGAGGACGGCGTGACGGGCACGACGTTTCGCAATCACGGCTACGAGGCGCG
CGTCGAGGCGCGGCACCGCAAGCTCGGCCCGTTCGAAGGCGCGCTCGGCGTGCAGGTCGGACAGAACACGTTCTCCGCGC
TCGGCGGCGAGGCGCTCGCGCCTACCACGCGCACGACGAGCGTCGCGCTGTTCGGCCTCGAGCAGTGGCAGGCGACCGAC
GCGCTGAAGCTGTCCGCCGGCGCGCGCATCGAGCACGTGCGGCTCGATCCGAGCGCGAACGGCGACGACAAGTTCGGCTT
CGCGCGCTCGCGCGATTTCAATGCGGGCAGCGTGTCGGCGGGCGCGCTGTATCAGCTCGCGCCCGCGTGGTCGCTCGCGG
GCAACGTGTCGTACACGGAGCGCGCGCCGACCTTCTACGAGCTGTACGCGAACGGCCCGCACGGCGCGACGGGGCAGTAC
CTGATCGGCCGGCCCGATGCGCAGAAGGAGAAGGCGGTGTCGACCGATCTCGCGCTGCGCTATGCGAGCGGTCCGAACCG
CGGCAGCATCGGCGTGTTCTACAGCCGCCTGCGGAACTACCTCGCCGAATACGACACCGGACGGCTCGTCGACGACGACG
GCGTGCCCGTGGCCCCGGGCGCCGACGACGCGCTGCGCGAGGCCGTCTATCGCGGCGTGCGCGCGGAGTTCTACGGCGTC
GAGCTCGAAGGCAGGTGGCGCGCGTTCGAGCGGCGCGGGCATCGCGTCGATCTCGAGCTGAGCGCCGACTACACGCACGC
GCGCAACGCGGACACGGGCGAGCCGCTGCCGCGGATCGCGCCGCTGCGCGCGACGCTCGCGGCCGATTACGGCTACGGCC
CGTTCGGTGCGCGCGCGCAGCTCACGCATGCGTGGGCGCAGCATCGCGTGCCCGAGCACGATCTCGCGACCGACGGCTAC
ACGTCGCTCGGCGTCGTGCTCACCTACAAGTTGCGCGTCGGCGCGACGAACTGGCTCGCCTATCTGCGCGGCGACAACCT
GACGAACCAGGACATCCGCTACGCGAGCTCGGTGGTGCGCAACATCGCGCCGCAGGGCGGGCGCAGCGTGAGCATCGGGA
TGCGCACGACATTCTGA

Upstream 100 bases:

>100_bases
TTCCTGTGCGCTGATATTGATACGTTATATCGTTTCCTGTTCATCGCGCGATTCGGCCCGTGATTCCGTCCACCCCGACC
ACACCATACCGATTACCGCA

Downstream 100 bases:

>100_bases
GCGCGCGCCGGGCGTCGGGCGTCGGGGGAGGGGCCCGCCGCCCGGCTGCGCCCCCTTCTGTTAGGCGGCGTTCGTTTGTA
AGATAGCGGTCGCCGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 698; Mature: 698

Protein sequence:

>698_residues
MDDHRRIAPPFARRLHPLSLLLAASLAHGETGAPPAERRSDAPPATALAPIFVTANPLGASALSSPTASLSGDALTLRRT
DSLGDTLNGLPGVSTTTYGPLVGRPIIRGMDGDRIRLLQNGVAAYDASSLSYDHAVPQDPLSVERIEIVRGPAALLYGGN
AVGGVVNTIDNRIPREAITGVSGALDASYGGANNARAGAALVEGGNGRFAFHLDAFGRETDALRIPGHAHSARQRALDGE
DASEPYGKLPNSDGRRYGGAAGGSYTWADGYVGASYSGYESNYGSVAETDARLQMRQERVALASEVRNLRGPFSQLKFDF
GYTNYQHKEIEDGVTGTTFRNHGYEARVEARHRKLGPFEGALGVQVGQNTFSALGGEALAPTTRTTSVALFGLEQWQATD
ALKLSAGARIEHVRLDPSANGDDKFGFARSRDFNAGSVSAGALYQLAPAWSLAGNVSYTERAPTFYELYANGPHGATGQY
LIGRPDAQKEKAVSTDLALRYASGPNRGSIGVFYSRLRNYLAEYDTGRLVDDDGVPVAPGADDALREAVYRGVRAEFYGV
ELEGRWRAFERRGHRVDLELSADYTHARNADTGEPLPRIAPLRATLAADYGYGPFGARAQLTHAWAQHRVPEHDLATDGY
TSLGVVLTYKLRVGATNWLAYLRGDNLTNQDIRYASSVVRNIAPQGGRSVSIGMRTTF

Sequences:

>Translated_698_residues
MDDHRRIAPPFARRLHPLSLLLAASLAHGETGAPPAERRSDAPPATALAPIFVTANPLGASALSSPTASLSGDALTLRRT
DSLGDTLNGLPGVSTTTYGPLVGRPIIRGMDGDRIRLLQNGVAAYDASSLSYDHAVPQDPLSVERIEIVRGPAALLYGGN
AVGGVVNTIDNRIPREAITGVSGALDASYGGANNARAGAALVEGGNGRFAFHLDAFGRETDALRIPGHAHSARQRALDGE
DASEPYGKLPNSDGRRYGGAAGGSYTWADGYVGASYSGYESNYGSVAETDARLQMRQERVALASEVRNLRGPFSQLKFDF
GYTNYQHKEIEDGVTGTTFRNHGYEARVEARHRKLGPFEGALGVQVGQNTFSALGGEALAPTTRTTSVALFGLEQWQATD
ALKLSAGARIEHVRLDPSANGDDKFGFARSRDFNAGSVSAGALYQLAPAWSLAGNVSYTERAPTFYELYANGPHGATGQY
LIGRPDAQKEKAVSTDLALRYASGPNRGSIGVFYSRLRNYLAEYDTGRLVDDDGVPVAPGADDALREAVYRGVRAEFYGV
ELEGRWRAFERRGHRVDLELSADYTHARNADTGEPLPRIAPLRATLAADYGYGPFGARAQLTHAWAQHRVPEHDLATDGY
TSLGVVLTYKLRVGATNWLAYLRGDNLTNQDIRYASSVVRNIAPQGGRSVSIGMRTTF
>Mature_698_residues
MDDHRRIAPPFARRLHPLSLLLAASLAHGETGAPPAERRSDAPPATALAPIFVTANPLGASALSSPTASLSGDALTLRRT
DSLGDTLNGLPGVSTTTYGPLVGRPIIRGMDGDRIRLLQNGVAAYDASSLSYDHAVPQDPLSVERIEIVRGPAALLYGGN
AVGGVVNTIDNRIPREAITGVSGALDASYGGANNARAGAALVEGGNGRFAFHLDAFGRETDALRIPGHAHSARQRALDGE
DASEPYGKLPNSDGRRYGGAAGGSYTWADGYVGASYSGYESNYGSVAETDARLQMRQERVALASEVRNLRGPFSQLKFDF
GYTNYQHKEIEDGVTGTTFRNHGYEARVEARHRKLGPFEGALGVQVGQNTFSALGGEALAPTTRTTSVALFGLEQWQATD
ALKLSAGARIEHVRLDPSANGDDKFGFARSRDFNAGSVSAGALYQLAPAWSLAGNVSYTERAPTFYELYANGPHGATGQY
LIGRPDAQKEKAVSTDLALRYASGPNRGSIGVFYSRLRNYLAEYDTGRLVDDDGVPVAPGADDALREAVYRGVRAEFYGV
ELEGRWRAFERRGHRVDLELSADYTHARNADTGEPLPRIAPLRATLAADYGYGPFGARAQLTHAWAQHRVPEHDLATDGY
TSLGVVLTYKLRVGATNWLAYLRGDNLTNQDIRYASSVVRNIAPQGGRSVSIGMRTTF

Specific function: Probable receptor, tonB-dependent [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 74715; Mature: 74715

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDHRRIAPPFARRLHPLSLLLAASLAHGETGAPPAERRSDAPPATALAPIFVTANPLGA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHEEEEEEECCCCCC
SALSSPTASLSGDALTLRRTDSLGDTLNGLPGVSTTTYGPLVGRPIIRGMDGDRIRLLQN
HHHCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCHHCCHHHCCCCCCEEEEECC
GVAAYDASSLSYDHAVPQDPLSVERIEIVRGPAALLYGGNAVGGVVNTIDNRIPREAITG
CCHHCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCHHHHHHHHHHHHCCHHHHHC
VSGALDASYGGANNARAGAALVEGGNGRFAFHLDAFGRETDALRIPGHAHSARQRALDGE
CCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCEEECCCCHHHHHHHCCCCC
DASEPYGKLPNSDGRRYGGAAGGSYTWADGYVGASYSGYESNYGSVAETDARLQMRQERV
CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ALASEVRNLRGPFSQLKFDFGYTNYQHKEIEDGVTGTTFRNHGYEARVEARHRKLGPFEG
HHHHHHHHHCCCHHHEEEECCCCCCCCHHHHCCCCCCEECCCCCEEEHHHHHHCCCCCCC
ALGVQVGQNTFSALGGEALAPTTRTTSVALFGLEQWQATDALKLSAGARIEHVRLDPSAN
CCEEEECCHHHHHCCCCCCCCCCCCCEEEEEECHHHCCCCCEEECCCCEEEEEEECCCCC
GDDKFGFARSRDFNAGSVSAGALYQLAPAWSLAGNVSYTERAPTFYELYANGPHGATGQY
CCCCCCCCCCCCCCCCCCCCCHHEEECCCHHHCCCCCCCCCCCEEEEEEECCCCCCCCCE
LIGRPDAQKEKAVSTDLALRYASGPNRGSIGVFYSRLRNYLAEYDTGRLVDDDGVPVAPG
EEECCCCHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCC
ADDALREAVYRGVRAEFYGVELEGRWRAFERRGHRVDLELSADYTHARNADTGEPLPRIA
CCHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCC
PLRATLAADYGYGPFGARAQLTHAWAQHRVPEHDLATDGYTSLGVVLTYKLRVGATNWLA
CHHHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEE
YLRGDNLTNQDIRYASSVVRNIAPQGGRSVSIGMRTTF
EEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MDDHRRIAPPFARRLHPLSLLLAASLAHGETGAPPAERRSDAPPATALAPIFVTANPLGA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHEEEEEEECCCCCC
SALSSPTASLSGDALTLRRTDSLGDTLNGLPGVSTTTYGPLVGRPIIRGMDGDRIRLLQN
HHHCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCHHCCHHHCCCCCCEEEEECC
GVAAYDASSLSYDHAVPQDPLSVERIEIVRGPAALLYGGNAVGGVVNTIDNRIPREAITG
CCHHCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCHHHHHHHHHHHHCCHHHHHC
VSGALDASYGGANNARAGAALVEGGNGRFAFHLDAFGRETDALRIPGHAHSARQRALDGE
CCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCEEECCCCHHHHHHHCCCCC
DASEPYGKLPNSDGRRYGGAAGGSYTWADGYVGASYSGYESNYGSVAETDARLQMRQERV
CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ALASEVRNLRGPFSQLKFDFGYTNYQHKEIEDGVTGTTFRNHGYEARVEARHRKLGPFEG
HHHHHHHHHCCCHHHEEEECCCCCCCCHHHHCCCCCCEECCCCCEEEHHHHHHCCCCCCC
ALGVQVGQNTFSALGGEALAPTTRTTSVALFGLEQWQATDALKLSAGARIEHVRLDPSAN
CCEEEECCHHHHHCCCCCCCCCCCCCEEEEEECHHHCCCCCEEECCCCEEEEEEECCCCC
GDDKFGFARSRDFNAGSVSAGALYQLAPAWSLAGNVSYTERAPTFYELYANGPHGATGQY
CCCCCCCCCCCCCCCCCCCCCHHEEECCCHHHCCCCCCCCCCCEEEEEEECCCCCCCCCE
LIGRPDAQKEKAVSTDLALRYASGPNRGSIGVFYSRLRNYLAEYDTGRLVDDDGVPVAPG
EEECCCCHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCC
ADDALREAVYRGVRAEFYGVELEGRWRAFERRGHRVDLELSADYTHARNADTGEPLPRIA
CCHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCC
PLRATLAADYGYGPFGARAQLTHAWAQHRVPEHDLATDGYTSLGVVLTYKLRVGATNWLA
CHHHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEE
YLRGDNLTNQDIRYASSVVRNIAPQGGRSVSIGMRTTF
EEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]