| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is mhpE
Identifier: 53722826
GI number: 53722826
Start: 2466225
End: 2467268
Strand: Reverse
Name: mhpE
Synonym: BPSS1807
Alternate gene names: 53722826
Gene position: 2467268-2466225 (Counterclockwise)
Preceding gene: 53722827
Following gene: 53722825
Centisome position: 77.76
GC content: 67.43
Gene sequence:
>1044_bases ATGATACTGATCAGCGATGCGACCTTGCGCGACGGCAACCATGCGATTCGTCACCAACTGAGCGCCGCGCAGATACATGC GTATGCGCGCGCGGCCGACGAAGCCGGCATCGATGTCGTCGAAGTCGGCCACGGCAATGGTCTCGGAGGCTCGTCTTGCC TGCTCGGGCAGACGCCGATCAGCGATCGCCTGATGCTCGAGACCGCGCGCGCCGCGCTGCGCACGAGCCGGCTCGGCGTG CATTTCATTCCGGGGCTCGGCAAGGCGGCGGACATCTCGCTTGCGCTCGAGATCGGCGTCGATGTCGTGCGCGTCGCGAC GCATTGCACCGAGGCGAACGTGTCGGCGCGCTTCATCGAGCAGACCCGGGCGGCCGGACGCACGGCGTTCGGCGTGCTGA TGATGTCGCACATGGCGCCGCCCGATGCGCTGCTCGCGCAGGCGAAGCTGATGGAGCGCTACGGCGCGCAGGCAGTGGTG CTGATGGACAGCGCCGGGTATTCGACGCCGTCGCTCGTGCGCGCGAAGGTCGAGCGCCTCGTCGACGGTCTCGACATCGA CGTCGGCTTTCACGCGCACAACAACCTCGGGCTCGCGGTCGCGAACAGCCTCGTCGCGCTCGAAGCGGGGGCGCGCATCG TCGACGCATGCGTGAAAGGCTTCGGGGCCGGCGCGGGCAATACGCAGCTCGAAACGCTCGTCGCCGCGATGGAGCGCGAA GGGCACGACACGCGCACGACGTTCGAGCGCGTGATGACGCTCGCGCGCGGCACGGAGACGTTTCTCAATCCGAAGACGCC GCACATCCAGCCGGCGAACATCGCGAGCGGGCTGTACGGCCTTTTCTCCGGCTACGTGCCGCATATCCAGAAAGCCGCGC AGGAATTCGGCGTCAACGAATTCGAGCTGTACAAGCGGCTTGCGGAGCGCAAGCTCGTCGCCGGGCAGGAGGACATCATC ATCGAAGAGGCAAGCCGTCTCGCGCGCGAACGGGATGTGCAGCGCGCAACGGGCGGCGTGCGCGTTCGCGAGCTGTCCGC GTGA
Upstream 100 bases:
>100_bases ACTATCTGCCCGAGTACGCGGGCAATCTGGACATCATCAACTGCGCGGCGCTCGCGGTCGCCTCGCATCGGCACGCAACC GCCAGACTAGGAGCCACACA
Downstream 100 bases:
>100_bases GCGCGCGCCTTTCACACGATCGAGCGAGGAGGAAATCGTGACAGGTTTGAATGAACGAGGCTTCGGCGCATGGAATCGGA TCGAGCGCGAAACGCTGACC
Product: 4-hydroxy-2-ketovalerate aldolase
Products: NA
Alternate protein names: HOA; 4-hydroxy-2-keto-pentanoic acid aldolase; 4-hydroxy-2-oxopentanoate aldolase [H]
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MILISDATLRDGNHAIRHQLSAAQIHAYARAADEAGIDVVEVGHGNGLGGSSCLLGQTPISDRLMLETARAALRTSRLGV HFIPGLGKAADISLALEIGVDVVRVATHCTEANVSARFIEQTRAAGRTAFGVLMMSHMAPPDALLAQAKLMERYGAQAVV LMDSAGYSTPSLVRAKVERLVDGLDIDVGFHAHNNLGLAVANSLVALEAGARIVDACVKGFGAGAGNTQLETLVAAMERE GHDTRTTFERVMTLARGTETFLNPKTPHIQPANIASGLYGLFSGYVPHIQKAAQEFGVNEFELYKRLAERKLVAGQEDII IEEASRLARERDVQRATGGVRVRELSA
Sequences:
>Translated_347_residues MILISDATLRDGNHAIRHQLSAAQIHAYARAADEAGIDVVEVGHGNGLGGSSCLLGQTPISDRLMLETARAALRTSRLGV HFIPGLGKAADISLALEIGVDVVRVATHCTEANVSARFIEQTRAAGRTAFGVLMMSHMAPPDALLAQAKLMERYGAQAVV LMDSAGYSTPSLVRAKVERLVDGLDIDVGFHAHNNLGLAVANSLVALEAGARIVDACVKGFGAGAGNTQLETLVAAMERE GHDTRTTFERVMTLARGTETFLNPKTPHIQPANIASGLYGLFSGYVPHIQKAAQEFGVNEFELYKRLAERKLVAGQEDII IEEASRLARERDVQRATGGVRVRELSA >Mature_347_residues MILISDATLRDGNHAIRHQLSAAQIHAYARAADEAGIDVVEVGHGNGLGGSSCLLGQTPISDRLMLETARAALRTSRLGV HFIPGLGKAADISLALEIGVDVVRVATHCTEANVSARFIEQTRAAGRTAFGVLMMSHMAPPDALLAQAKLMERYGAQAVV LMDSAGYSTPSLVRAKVERLVDGLDIDVGFHAHNNLGLAVANSLVALEAGARIVDACVKGFGAGAGNTQLETLVAAMERE GHDTRTTFERVMTLARGTETFLNPKTPHIQPANIASGLYGLFSGYVPHIQKAAQEFGVNEFELYKRLAERKLVAGQEDII IEEASRLARERDVQRATGGVRVRELSA
Specific function: Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds [H]
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-hydroxy-2-oxovalerate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1786548, Length=332, Percent_Identity=39.7590361445783, Blast_Score=214, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6320071, Length=248, Percent_Identity=27.0161290322581, Blast_Score=67, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6320019, Length=248, Percent_Identity=26.6129032258064, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017629 - InterPro: IPR013785 - InterPro: IPR012425 - InterPro: IPR000891 - ProDom: PD005364 [H]
Pfam domain/function: PF07836 DmpG_comm; PF00682 HMGL-like [H]
EC number: =4.1.3.39 [H]
Molecular weight: Translated: 37007; Mature: 37007
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50991 PYR_CT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILISDATLRDGNHAIRHQLSAAQIHAYARAADEAGIDVVEVGHGNGLGGSSCLLGQTPI CEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEECCCCC SDRLMLETARAALRTSRLGVHFIPGLGKAADISLALEIGVDVVRVATHCTEANVSARFIE CHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHH QTRAAGRTAFGVLMMSHMAPPDALLAQAKLMERYGAQAVVLMDSAGYSTPSLVRAKVERL HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHH VDGLDIDVGFHAHNNLGLAVANSLVALEAGARIVDACVKGFGAGAGNTQLETLVAAMERE HCCCCEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC GHDTRTTFERVMTLARGTETFLNPKTPHIQPANIASGLYGLFSGYVPHIQKAAQEFGVNE CCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH FELYKRLAERKLVAGQEDIIIEEASRLARERDVQRATGGVRVRELSA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC >Mature Secondary Structure MILISDATLRDGNHAIRHQLSAAQIHAYARAADEAGIDVVEVGHGNGLGGSSCLLGQTPI CEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEECCCCC SDRLMLETARAALRTSRLGVHFIPGLGKAADISLALEIGVDVVRVATHCTEANVSARFIE CHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHH QTRAAGRTAFGVLMMSHMAPPDALLAQAKLMERYGAQAVVLMDSAGYSTPSLVRAKVERL HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHH VDGLDIDVGFHAHNNLGLAVANSLVALEAGARIVDACVKGFGAGAGNTQLETLVAAMERE HCCCCEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC GHDTRTTFERVMTLARGTETFLNPKTPHIQPANIASGLYGLFSGYVPHIQKAAQEFGVNE CCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH FELYKRLAERKLVAGQEDIIIEEASRLARERDVQRATGGVRVRELSA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA