| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is lipA1
Identifier: 53722762
GI number: 53722762
Start: 2390190
End: 2391284
Strand: Reverse
Name: lipA1
Synonym: BPSS1741
Alternate gene names: 53722762
Gene position: 2391284-2390190 (Counterclockwise)
Preceding gene: 53722763
Following gene: 53722761
Centisome position: 75.36
GC content: 66.94
Gene sequence:
>1095_bases ATGGCCAGAACGATGCGATCCAGGGCAGTGGCGGCGGCAGTCGCGTTCGCGGTGAGCGCGGCGCCCGCCGCGGGCATCGG GACTTTCCTCTCGCTTGCAGGCACGCAAGCCGCCGCCGCGGCGACGAGCGCCGTCGACAACTACGCGGCCACCCAATATC CGATCATCCTCGTGCACGGTCTGACCGGCACCGACAAATACGCGAACGTTCTCGAATACTGGTACGGCATCCGGGAAGAC TTGCAGGCGCACGGCGCGCAGGTCTATGTCGCGAACCTGTCCGGCTTCCAGAGCGACGACGGGCCGAACGGACGCGGCGA ACAGCTGCTCGCATACGTGCAGCAGGTGCTCGCCGCGACGGGCGCATCGAAGGTGAATCTGATCGGCCACAGCCAGGGCG GGCTGACCTCGCGCTACGTCGCGGCCGTCGCGCCGCAACTGGTCGCATCGGTGACGACGATCGGCACGCCGCATCGCGGT TCGGAGTTCGCGGACTTCGTGCAAACCGTGCTCGCGTACGATCCGACCGGCTTGTCGTCGACGGTGATCGCCGCGTTCGT CAATGTGTTCGGCATCCTGACGAGCAGCACCAACAACACGAACCAGGACGCGCTCGCCGCGCTGAAGACGCTGACGACTT CGCAGGCCGCGACGTACAACCAGAACTATCCGAGCGCGGGCCTCGGCGCGCCGGGCTCGTGCCAGACAGGGGCGCAGACC GAGACCGTAGGCGGCAACACGCATCTGCTGTATTCGTGGGGTGGCACGGCGATCCAGCCGACGCTGTCGATTCTCGGCGT GACGGGCGCGACCGACACGAGCACGATTCCCGTCGTCGATCCGGCGAACGTGCTCGATGCGTCGACGCTCGCGATGCTCG GCTCCGGCACCGTGATGATCAATCGCGGCTCCGGTGCGAACGACGGCCTCGTGTCGCGCTGCAGCTCGCTGTACGGCCAG GTGCTCGGCACGAGCTACAAGTGGAACCACCTCGACGAGATCAACCAGTTGCTCGGCGTGCGCGGCGCGTACGCGGAGGA TCCGGTCGCGGTGATCCGCACGCATGCGAACCGGTTGAAGACGCAGGGTGTGTGA
Upstream 100 bases:
>100_bases GGGTCGGCGTGCATGCCGCGTGTGCGGGCGACGCGAAACGTAGGCGTGCGAACAGAAGCAATATTCCCATCCGATACGAT TCAAACAACAGGAGACGTAC
Downstream 100 bases:
>100_bases TCGATGAAGGGAGAAGGCAGCGTTGCGCGGCGCGTCGCGCTTTACTGTGTGGCCGGCGCTGTCGCGGCCGGCGCGGTGTG GTATGTCGTCGGCGCGCCGG
Product: lipase precursor
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MARTMRSRAVAAAVAFAVSAAPAAGIGTFLSLAGTQAAAAATSAVDNYAATQYPIILVHGLTGTDKYANVLEYWYGIRED LQAHGAQVYVANLSGFQSDDGPNGRGEQLLAYVQQVLAATGASKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRG SEFADFVQTVLAYDPTGLSSTVIAAFVNVFGILTSSTNNTNQDALAALKTLTTSQAATYNQNYPSAGLGAPGSCQTGAQT ETVGGNTHLLYSWGGTAIQPTLSILGVTGATDTSTIPVVDPANVLDASTLAMLGSGTVMINRGSGANDGLVSRCSSLYGQ VLGTSYKWNHLDEINQLLGVRGAYAEDPVAVIRTHANRLKTQGV
Sequences:
>Translated_364_residues MARTMRSRAVAAAVAFAVSAAPAAGIGTFLSLAGTQAAAAATSAVDNYAATQYPIILVHGLTGTDKYANVLEYWYGIRED LQAHGAQVYVANLSGFQSDDGPNGRGEQLLAYVQQVLAATGASKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRG SEFADFVQTVLAYDPTGLSSTVIAAFVNVFGILTSSTNNTNQDALAALKTLTTSQAATYNQNYPSAGLGAPGSCQTGAQT ETVGGNTHLLYSWGGTAIQPTLSILGVTGATDTSTIPVVDPANVLDASTLAMLGSGTVMINRGSGANDGLVSRCSSLYGQ VLGTSYKWNHLDEINQLLGVRGAYAEDPVAVIRTHANRLKTQGV >Mature_363_residues ARTMRSRAVAAAVAFAVSAAPAAGIGTFLSLAGTQAAAAATSAVDNYAATQYPIILVHGLTGTDKYANVLEYWYGIREDL QAHGAQVYVANLSGFQSDDGPNGRGEQLLAYVQQVLAATGASKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRGS EFADFVQTVLAYDPTGLSSTVIAAFVNVFGILTSSTNNTNQDALAALKTLTTSQAATYNQNYPSAGLGAPGSCQTGAQTE TVGGNTHLLYSWGGTAIQPTLSILGVTGATDTSTIPVVDPANVLDASTLAMLGSGTVMINRGSGANDGLVSRCSSLYGQV LGTSYKWNHLDEINQLLGVRGAYAEDPVAVIRTHANRLKTQGV
Specific function: Catalyzes the hydrolysis of triglycerides [H]
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Pseudomonas lipase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320263, Length=165, Percent_Identity=30.9090909090909, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 37404; Mature: 37273
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTMRSRAVAAAVAFAVSAAPAAGIGTFLSLAGTQAAAAATSAVDNYAATQYPIILVHG CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEC LTGTDKYANVLEYWYGIREDLQAHGAQVYVANLSGFQSDDGPNGRGEQLLAYVQQVLAAT CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHC GASKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRGSEFADFVQTVLAYDPTGLSS CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHH TVIAAFVNVFGILTSSTNNTNQDALAALKTLTTSQAATYNQNYPSAGLGAPGSCQTGAQT HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ETVGGNTHLLYSWGGTAIQPTLSILGVTGATDTSTIPVVDPANVLDASTLAMLGSGTVMI EECCCCEEEEEECCCCCCCCHHHEEEECCCCCCCEECCCCCHHHHHHHHHHHHCCCEEEE NRGSGANDGLVSRCSSLYGQVLGTSYKWNHLDEINQLLGVRGAYAEDPVAVIRTHANRLK ECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH TQGV CCCC >Mature Secondary Structure ARTMRSRAVAAAVAFAVSAAPAAGIGTFLSLAGTQAAAAATSAVDNYAATQYPIILVHG CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEC LTGTDKYANVLEYWYGIREDLQAHGAQVYVANLSGFQSDDGPNGRGEQLLAYVQQVLAAT CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHC GASKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRGSEFADFVQTVLAYDPTGLSS CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHH TVIAAFVNVFGILTSSTNNTNQDALAALKTLTTSQAATYNQNYPSAGLGAPGSCQTGAQT HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ETVGGNTHLLYSWGGTAIQPTLSILGVTGATDTSTIPVVDPANVLDASTLAMLGSGTVMI EECCCCEEEEEECCCCCCCCHHHEEEECCCCCCCEECCCCCHHHHHHHHHHHHCCCEEEE NRGSGANDGLVSRCSSLYGQVLGTSYKWNHLDEINQLLGVRGAYAEDPVAVIRTHANRLK ECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH TQGV CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1987151; 9032073; 9032074 [H]