| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722763
Identifier: 53722763
GI number: 53722763
Start: 2391608
End: 2393857
Strand: Reverse
Name: 53722763
Synonym: BPSS1742
Alternate gene names: NA
Gene position: 2393857-2391608 (Counterclockwise)
Preceding gene: 53722764
Following gene: 53722762
Centisome position: 75.44
GC content: 69.11
Gene sequence:
>2250_bases ATGACATCCACATTCCTGCGTCACGCGCCCACCGCGCGTGGAGACCACGCGCGCCGCCGGCGGCGCGCGATCACGCTTAC CGTTCCCGCGCTCGCCGCGGGCGCCTTTCACCTCGCGCCGGCCGTCGCGCAGACGAGCGAGGCCGTGCACGGCCACGGCA CGCTCGGCGCGTCCGGCGTAGCGAGCCGCGCCGACACCGACGCGGCGAGCGCCAAATCGGACGGCGCGGTTCGCGAAGCG GCGAGCGCCGCGGCGAGCCGCACGACGACCGGCGCCGCGCCGGACGCCACGACGCTGCCGACGATCGAAATCGTCGCGGC GCCCGAATCGACGCCGCTCGTCGTCGTCACCGATCCGAAGACGCCGCGCCAGCCGCTGCCCGCGAGCGACGGCGCCGATT ATCTGAAGACGATTCCCGGCTTCGCGTCGATCCGCAGCGGCGGCACGAACGGCGACCCGGTGCTGCGCGGGATGTTCGGC TCGCGGCTGAACATTCTCGCGAACGGCATGCCGACGCTCGGTGCGTGTCCCGGCCGGATGGACGCGCCGACGTCGTACAT CGCGCCCGAGAGCTACGACAAGGTGACGCTCGTCAAGGGGCCGCAGACCGTGCTGTACGGGCCGGGCGCATCGGCGGGCA CGGTGCTGTTCGAGCGCGTGACGCCGCGCTTCAAGACGCCGGGCATGCGCTTTGACGGCAGCGTCGTCGGCGGCTCGTTC GGGCGCAACGATCAGAACGTCGACGTGACGGCCGGCACGCCCGACTTCTACGGGCGCGTGAGCGCGAACCATGCGCACTC GCAGGACTACGAGGACGGCAACGGCCGCACGGTGCCGTCGCAATGGGACAAGTGGAACGCGGACGCGGCGCTCGGCTGGA CGCCCGACGACAACACGCGGCTCGAGCTGACGGCGGGCACGGGCGACGGCTACGCGCGCTATGCGGGCCGCGGAATGGAC GGCGCGCATTTCCGGCGCGAGACGTTCGGTCTGAAGTTCGACAAGAAGCACATCGGCGACGTGCTCGATCGCATCGATGC GCAGGTCTTCTACAACGAAGCCGATCACGTGATGGACAACTACACGTTGCGGATGCCCGATCCGACGAGCAGCATGCCGA TGCGCATGGCCTCCGAAGTGCGCCGCCGCACGCTCGGCGCGCGCGTCGCGGCGACGCTGCGCTTGACCGACGCGTTCAAG CTCGTGACGGGCGTCGATGCGCAGTCGAACCGCCTCGACTCGCGCTCGGCGATGGGGATGCAGAACTACGGCGACAAGCC GTGGAATCCGCAGGCGAACATGTGGAACGCGGGCGCGTTCGGCGAGCTGACCTGGTATGCGAGCGATGCGTCGCGCGTGA TCGGCGGCGCGCGGATCGACTATGCGGCCGCGCGCGACAAGCGCGCGACGACGGGCGGCATGAAGATGAGCATGCGCAAT CCGACGTTCGACGATCTTCGCTCGCGCGTGCTGCCGAGCGGCTTCGTGCGCTACGAGCGTGATCTCGCGTCGCTGCCCGT CACGTGGTACGCGGGCATCGGCCATGCGCAGCGCTTCCCTGATTACTGGGAGCTGTTCTCCGCCAAGCGCGGCCCGAACG GTTCGATCAACGCATTCTCCGCGATCAAGCCCGAGAAGACGACGCAGCTCGACATCGGCGCGCAGTACAAGAGCGACAAG CTCGACGCCTGGGTGTCCGCCTATGCGGGCTACGTGCAGGACTTCATCCTGTTCGACTATGCGACGGGCCCGATGGGACA GATCACGCAGGCGACGAACGTCAACGCGCAGATCATGGGCGGTGAGGTGGGCGCGTCGTGGCGTCCGCTCGCGCCGTGGC GCTTCGAAGGGTCGCTCGCGTATGCGTGGGGGCGCAACGTGCAAAGCGGTGCGCCGCTGCCGCAGATGCCGCCGCTCGAG GCACGCTTCGGCGTCGAGTACACTCGCGGGCCGTGGTCGGCGGGCGGGCTGTGGCGGGTCGTTGCGCCGCAGCATCGCTA CGCGCTGAACGAGGGCAACGTCGTCGGCAAGGACTTTGGTCCGAGCGCCGGTTTCGGCGTGCTGTCGCTGCACGCGCAGT ACAACGTGAGCAAGACGGTGCAGATCTCGGTCGGCGTCGACAACGTGCTCGACAAGGCTTATGCGGAGCACCTGAACCTC GCGGGCAACGCCGGTTTCGGCTATCCGGCGAATCTGCCTGTCACCGAACCCGGCCGTACCGCGTGGGTTCGTTTGAGCAC CAAGCTCTGA
Upstream 100 bases:
>100_bases GACAGACGCCTGAACGTCCGATTTCATTTCCGTTCATGCCGTCCCCGCCTCCGTTCGATCCGACGATCGCGCGGAAGGGG CGTCTTTCGAGTTGCGATTC
Downstream 100 bases:
>100_bases TCCTTTCCGCGTTCTTCCTCCCCCGCATCGCAGTGCAGCATCCGCGATGCGGGCGGCCAACCCGCTTGACTCCCCTGCTT GCGTCAATCGATTAGAGAGC
Product: outer membrane copper receptor
Products: NA
Alternate protein names: NB-Dependent Copper Receptor; NB Dependent Receptor; NB-Dependent Receptor Protein; Outer Membrane Copper Receptor; Outer Membrane Copper Receptor OprC; Outer Membrane Receptor Protein; Outer Membrane Protein C; Nb-Dependent Receptor; Outer Membrane Protein; Outer Membrane Protein OprC; Exported Heme Receptor Protein; NB-Dependent Receptor Plug; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Outer Membrane Receptor; NB-Dependent Siderophore Receptor Family Protein; Outer Membrane Protein NosA; IMP Dehydrogenase/GMP Reductase; NB-Dependent Haemoglobin/Transferrin/Lactoferrin Receptor; NB-Dependent Receptor Plug Domain-Containing; Haem/Haemoglobin Uptake Outer Membrane Receptor PhuR; Ferrienterochelin/Colicin Outer Membrane Receptor; NB-Dependent Outer Membrane Heme Receptor; Outer Membrane Protein OprC Complement; Iron Complex Outermembrane Recepter Protein; Outer Membrane Heme Receptor; Outer Membrane Protein Nosa; Nb-Dependent Copper Receptor; Outer Membrane nB-Dependent Heme Receptor; N-B Dependent Receptor; Outer Membrane Receptor Protein Mostly Fe Transport; NosA Protein; Membrane Receptor Protein; NB-Dependent Receptor Domain Protein; Outer Membrane Receptor Proteins
Number of amino acids: Translated: 749; Mature: 748
Protein sequence:
>749_residues MTSTFLRHAPTARGDHARRRRRAITLTVPALAAGAFHLAPAVAQTSEAVHGHGTLGASGVASRADTDAASAKSDGAVREA ASAAASRTTTGAAPDATTLPTIEIVAAPESTPLVVVTDPKTPRQPLPASDGADYLKTIPGFASIRSGGTNGDPVLRGMFG SRLNILANGMPTLGACPGRMDAPTSYIAPESYDKVTLVKGPQTVLYGPGASAGTVLFERVTPRFKTPGMRFDGSVVGGSF GRNDQNVDVTAGTPDFYGRVSANHAHSQDYEDGNGRTVPSQWDKWNADAALGWTPDDNTRLELTAGTGDGYARYAGRGMD GAHFRRETFGLKFDKKHIGDVLDRIDAQVFYNEADHVMDNYTLRMPDPTSSMPMRMASEVRRRTLGARVAATLRLTDAFK LVTGVDAQSNRLDSRSAMGMQNYGDKPWNPQANMWNAGAFGELTWYASDASRVIGGARIDYAAARDKRATTGGMKMSMRN PTFDDLRSRVLPSGFVRYERDLASLPVTWYAGIGHAQRFPDYWELFSAKRGPNGSINAFSAIKPEKTTQLDIGAQYKSDK LDAWVSAYAGYVQDFILFDYATGPMGQITQATNVNAQIMGGEVGASWRPLAPWRFEGSLAYAWGRNVQSGAPLPQMPPLE ARFGVEYTRGPWSAGGLWRVVAPQHRYALNEGNVVGKDFGPSAGFGVLSLHAQYNVSKTVQISVGVDNVLDKAYAEHLNL AGNAGFGYPANLPVTEPGRTAWVRLSTKL
Sequences:
>Translated_749_residues MTSTFLRHAPTARGDHARRRRRAITLTVPALAAGAFHLAPAVAQTSEAVHGHGTLGASGVASRADTDAASAKSDGAVREA ASAAASRTTTGAAPDATTLPTIEIVAAPESTPLVVVTDPKTPRQPLPASDGADYLKTIPGFASIRSGGTNGDPVLRGMFG SRLNILANGMPTLGACPGRMDAPTSYIAPESYDKVTLVKGPQTVLYGPGASAGTVLFERVTPRFKTPGMRFDGSVVGGSF GRNDQNVDVTAGTPDFYGRVSANHAHSQDYEDGNGRTVPSQWDKWNADAALGWTPDDNTRLELTAGTGDGYARYAGRGMD GAHFRRETFGLKFDKKHIGDVLDRIDAQVFYNEADHVMDNYTLRMPDPTSSMPMRMASEVRRRTLGARVAATLRLTDAFK LVTGVDAQSNRLDSRSAMGMQNYGDKPWNPQANMWNAGAFGELTWYASDASRVIGGARIDYAAARDKRATTGGMKMSMRN PTFDDLRSRVLPSGFVRYERDLASLPVTWYAGIGHAQRFPDYWELFSAKRGPNGSINAFSAIKPEKTTQLDIGAQYKSDK LDAWVSAYAGYVQDFILFDYATGPMGQITQATNVNAQIMGGEVGASWRPLAPWRFEGSLAYAWGRNVQSGAPLPQMPPLE ARFGVEYTRGPWSAGGLWRVVAPQHRYALNEGNVVGKDFGPSAGFGVLSLHAQYNVSKTVQISVGVDNVLDKAYAEHLNL AGNAGFGYPANLPVTEPGRTAWVRLSTKL >Mature_748_residues TSTFLRHAPTARGDHARRRRRAITLTVPALAAGAFHLAPAVAQTSEAVHGHGTLGASGVASRADTDAASAKSDGAVREAA SAAASRTTTGAAPDATTLPTIEIVAAPESTPLVVVTDPKTPRQPLPASDGADYLKTIPGFASIRSGGTNGDPVLRGMFGS RLNILANGMPTLGACPGRMDAPTSYIAPESYDKVTLVKGPQTVLYGPGASAGTVLFERVTPRFKTPGMRFDGSVVGGSFG RNDQNVDVTAGTPDFYGRVSANHAHSQDYEDGNGRTVPSQWDKWNADAALGWTPDDNTRLELTAGTGDGYARYAGRGMDG AHFRRETFGLKFDKKHIGDVLDRIDAQVFYNEADHVMDNYTLRMPDPTSSMPMRMASEVRRRTLGARVAATLRLTDAFKL VTGVDAQSNRLDSRSAMGMQNYGDKPWNPQANMWNAGAFGELTWYASDASRVIGGARIDYAAARDKRATTGGMKMSMRNP TFDDLRSRVLPSGFVRYERDLASLPVTWYAGIGHAQRFPDYWELFSAKRGPNGSINAFSAIKPEKTTQLDIGAQYKSDKL DAWVSAYAGYVQDFILFDYATGPMGQITQATNVNAQIMGGEVGASWRPLAPWRFEGSLAYAWGRNVQSGAPLPQMPPLEA RFGVEYTRGPWSAGGLWRVVAPQHRYALNEGNVVGKDFGPSAGFGVLSLHAQYNVSKTVQISVGVDNVLDKAYAEHLNLA GNAGFGYPANLPVTEPGRTAWVRLSTKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80459; Mature: 80328
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTFLRHAPTARGDHARRRRRAITLTVPALAAGAFHLAPAVAQTSEAVHGHGTLGASGV CCCCCHHCCCCCCCHHHHHHCEEEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCC ASRADTDAASAKSDGAVREAASAAASRTTTGAAPDATTLPTIEIVAAPESTPLVVVTDPK CCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCC TPRQPLPASDGADYLKTIPGFASIRSGGTNGDPVLRGMFGSRLNILANGMPTLGACPGRM CCCCCCCCCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCC DAPTSYIAPESYDKVTLVKGPQTVLYGPGASAGTVLFERVTPRFKTPGMRFDGSVVGGSF CCCCCCCCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCC GRNDQNVDVTAGTPDFYGRVSANHAHSQDYEDGNGRTVPSQWDKWNADAALGWTPDDNTR CCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCE LELTAGTGDGYARYAGRGMDGAHFRRETFGLKFDKKHIGDVLDRIDAQVFYNEADHVMDN EEEEECCCCCHHHHCCCCCCCHHHHHHHCCCEECHHHHHHHHHHHHHHEEECCHHHHHCC YTLRMPDPTSSMPMRMASEVRRRTLGARVAATLRLTDAFKLVTGVDAQSNRLDSRSAMGM CEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHCCCCHHCCCCHHHHCCH QNYGDKPWNPQANMWNAGAFGELTWYASDASRVIGGARIDYAAARDKRATTGGMKMSMRN HHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCEEEHHHHCCCCCCCCCEEEEECC PTFDDLRSRVLPSGFVRYERDLASLPVTWYAGIGHAQRFPDYWELFSAKRGPNGSINAFS CCHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCHHHCCHHHHHHHCCCCCCCCCCEEE AIKPEKTTQLDIGAQYKSDKLDAWVSAYAGYVQDFILFDYATGPMGQITQATNVNAQIMG CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCEECCCCCEEEEC GEVGASWRPLAPWRFEGSLAYAWGRNVQSGAPLPQMPPLEARFGVEYTRGPWSAGGLWRV CCCCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCHHCCCEECCCCCCCCCEEEE VAPQHRYALNEGNVVGKDFGPSAGFGVLSLHAQYNVSKTVQISVGVDNVLDKAYAEHLNL ECCCHHEECCCCCEECCCCCCCCCCEEEEEEEEECCCEEEEEEECHHHHHHHHHHHHHCC AGNAGFGYPANLPVTEPGRTAWVRLSTKL CCCCCCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure TSTFLRHAPTARGDHARRRRRAITLTVPALAAGAFHLAPAVAQTSEAVHGHGTLGASGV CCCCHHCCCCCCCHHHHHHCEEEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCC ASRADTDAASAKSDGAVREAASAAASRTTTGAAPDATTLPTIEIVAAPESTPLVVVTDPK CCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCC TPRQPLPASDGADYLKTIPGFASIRSGGTNGDPVLRGMFGSRLNILANGMPTLGACPGRM CCCCCCCCCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCC DAPTSYIAPESYDKVTLVKGPQTVLYGPGASAGTVLFERVTPRFKTPGMRFDGSVVGGSF CCCCCCCCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCC GRNDQNVDVTAGTPDFYGRVSANHAHSQDYEDGNGRTVPSQWDKWNADAALGWTPDDNTR CCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCE LELTAGTGDGYARYAGRGMDGAHFRRETFGLKFDKKHIGDVLDRIDAQVFYNEADHVMDN EEEEECCCCCHHHHCCCCCCCHHHHHHHCCCEECHHHHHHHHHHHHHHEEECCHHHHHCC YTLRMPDPTSSMPMRMASEVRRRTLGARVAATLRLTDAFKLVTGVDAQSNRLDSRSAMGM CEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHCCCCHHCCCCHHHHCCH QNYGDKPWNPQANMWNAGAFGELTWYASDASRVIGGARIDYAAARDKRATTGGMKMSMRN HHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCEEEHHHHCCCCCCCCCEEEEECC PTFDDLRSRVLPSGFVRYERDLASLPVTWYAGIGHAQRFPDYWELFSAKRGPNGSINAFS CCHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCHHHCCHHHHHHHCCCCCCCCCCEEE AIKPEKTTQLDIGAQYKSDKLDAWVSAYAGYVQDFILFDYATGPMGQITQATNVNAQIMG CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCEECCCCCEEEEC GEVGASWRPLAPWRFEGSLAYAWGRNVQSGAPLPQMPPLEARFGVEYTRGPWSAGGLWRV CCCCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCHHCCCEECCCCCCCCCEEEE VAPQHRYALNEGNVVGKDFGPSAGFGVLSLHAQYNVSKTVQISVGVDNVLDKAYAEHLNL ECCCHHEECCCCCEECCCCCCCCCCEEEEEEEEECCCEEEEEEECHHHHHHHHHHHHHCC AGNAGFGYPANLPVTEPGRTAWVRLSTKL CCCCCCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA