| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722706
Identifier: 53722706
GI number: 53722706
Start: 2318209
End: 2320389
Strand: Reverse
Name: 53722706
Synonym: BPSS1686
Alternate gene names: NA
Gene position: 2320389-2318209 (Counterclockwise)
Preceding gene: 53722710
Following gene: 53722705
Centisome position: 73.13
GC content: 70.43
Gene sequence:
>2181_bases TTGCGACGTTTGATGCGAATGGCGGTGGCGGTGTGCGCGGCGACGGCGCTCGCGGGCGCCGCGCGAGCCGAGAACGTGCT GCCCGCGACGACGTCGTGGATCGGCAACACCTATGGCTATGGCGACGGCACGTGGACGCAGATCGACATTCGCGCGATCG CGGTCGCGCCTGACGGCAAGGTGTATACGAACGCGCCGTGGGACGAGAGCGGCGCGGAGGCGAGCGTCTATCAGGACGGC AAGATGCTCGGCTTCGCGGGCGGCACGCACGGCTGGGGCAACGCGGGCGGCAGCGCGATCGCGGTCAACAGCCGCTACGC GTACGTCGCGATCGCGGTCGGCAACGAGAAAGGCCGGCTCGTCGCGCCGGGCGTCTGGCCGGACAAGGGCCGGCAGTGGT ACGGCATCTCGCGCCGCGAGATCGGCGACGTGAAGCAGGCCGCGCCGTTTCGCGGCGCGAAGGCGGGCGACGCGCGCGCG AAGCTTGCCGCGAGCTTCCTGATGGTCAACGAAGTGCCGACCGACACGCGCGCGGAAGTCGCCGGGCTCGCCGCGAGCGA CAGCGTGCTGTACGCGAGCGATCCGCTGCACGACGCCGTGAACGTGTACGACGCGCAGACGATGCAGAAGAAAGGGTCAT GGAACGCGCATGAGCCGGGCCGGATCGCGCTCGCCGCCGACGGCACGCTCTGGTTGTTGACCGATACGCTGAACGGCCCC GCGAAGCTCGCGCATGTGCGGCCCGACGGGCGCGCGATCGACGACGCGCCGGCGCTGCCGCCGGACGCGCAGGCCGTCGA CGTCGCGACCGATGCGAAGGGCCGCGTGCTTCTCGCCGACAACGGCCCGCGCCAGCAGATCCTGATCTTCTCGAAATCGG CCGACGGCGGCTACGCGATGAGCGGCACGCTCGGCGAGCGCGGCGGCATCTTCTCGGGCGTCGCGGGCCGGCCGGGGCCG CAGCGCTTCAACGGGCTCACGGGCGTCGGCGTCGACCGGGCGGGCAACGTGTACGTCGCGACCAACGGCATCGGCCCGCG CCACGGCACGATCGGCGCGGGGCTCGGCAGCACGCTCGAGAGCTACGCGCCCGACGGCCGGCTGCGCTGGCAGGTGCAGG GCCTGCTGTTCGTCGACGGCGCGTGGATCGACCCGGGCCGGCCGAACAGCGTGTACACGGGCAACAAGCGCTTCGAGCTC GATCTGTCGAAGCCCGCGGGCAAGGAATGGAAATATGCGGGATTCCTGTCGAACCGCTTCAAGTATCCGGACGACCCGGT GTTCAACACCGATCAATGGCCGGGGATGCCGTTCGCGCGCAGGGTCGCGGGCCGCACGTTCCTCTACCTGACCGACATGC ACGCCGACCATCTGAAGATCTATCGCTTCGATCCGAAGCGCGACGGCGAGACCGCGATTCCGTCGGGGCTGCTCGCGGGG CGCGCGCGGCCCGTCGACAAGGTGCCGAACCGGCCGCCGGGCGGCGATTGGATCTGGCGCGACGCGAACGGCAACGGCCG CATCGACGAAGGCGAGTTCGAGCTCAACACGACCGGCAAGGGGATGGCGGGCGGCTGGGGCTGGTGGATCGACACGGGCG GCGATATCTGGCGCACGAGCGACACGCGCGGCATCCGGCGCTTTCGCTTCGGCGGGCTCGACAAGGCGGGCAACCCGATC TACTCGTACGACAAGCTGACGACGTACCCAAGCCCCGCGCCGTTTACCGAGCTGCGCCGCGCGCTGTACGACGCGTCCTC GGACACGCTGTACGTGACGGGCTACACGGCCGACGCGCCGCGCGTGGGCGGCCTGTCGAAGGAGGTGGGGCGCGTGCTCG TGCGCTTCGACAAGTGGTCGAGCGGCGCGCCGGTCATGCGCTATCAGGTCGCGCTGCCGTGGCGGCTCGACGCGAAGCCG ATCTTCACGCTGATCGGGCTGACGCAGGAGGGGCGCTACCTGTTCGGCGTCGAGCCCGTCGGCACGGTGCACGTGTACGA CAAGGACAACGGCCGCGAGCTCGGCGTGATCAAGCCGGGGCCGGAGGTGGGGCGCGCGTCGGGCTGGGTGGACGTGCCGT TCGGCATCAGCGCGTACCGGCGCGAGAACGGCGAGTACCTGGTCTTCGTCGAGGAGGACGCGCGCGGCAAGGTGATGATG TATCGATGGAGGCCGCAATGA
Upstream 100 bases:
>100_bases GTTTGCGTGCAGGCGTCGCAAACGCACGAGCGTTTCGCGTGTCGGGCTCGCCTGCGGCCAGGCGCGCGGGCGTCTCGGCA CGGTCGAAGGGAGAAGCGTT
Downstream 100 bases:
>100_bases TCGGGGCGGGAGCGGCGGCGATGGCGAACGCGGCGGGGCGGCGCGTCCATGGATAAAGGCATGCTGAAGAACGTCGCGAT CAATTTCTTCGGATTGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 726; Mature: 726
Protein sequence:
>726_residues MRRLMRMAVAVCAATALAGAARAENVLPATTSWIGNTYGYGDGTWTQIDIRAIAVAPDGKVYTNAPWDESGAEASVYQDG KMLGFAGGTHGWGNAGGSAIAVNSRYAYVAIAVGNEKGRLVAPGVWPDKGRQWYGISRREIGDVKQAAPFRGAKAGDARA KLAASFLMVNEVPTDTRAEVAGLAASDSVLYASDPLHDAVNVYDAQTMQKKGSWNAHEPGRIALAADGTLWLLTDTLNGP AKLAHVRPDGRAIDDAPALPPDAQAVDVATDAKGRVLLADNGPRQQILIFSKSADGGYAMSGTLGERGGIFSGVAGRPGP QRFNGLTGVGVDRAGNVYVATNGIGPRHGTIGAGLGSTLESYAPDGRLRWQVQGLLFVDGAWIDPGRPNSVYTGNKRFEL DLSKPAGKEWKYAGFLSNRFKYPDDPVFNTDQWPGMPFARRVAGRTFLYLTDMHADHLKIYRFDPKRDGETAIPSGLLAG RARPVDKVPNRPPGGDWIWRDANGNGRIDEGEFELNTTGKGMAGGWGWWIDTGGDIWRTSDTRGIRRFRFGGLDKAGNPI YSYDKLTTYPSPAPFTELRRALYDASSDTLYVTGYTADAPRVGGLSKEVGRVLVRFDKWSSGAPVMRYQVALPWRLDAKP IFTLIGLTQEGRYLFGVEPVGTVHVYDKDNGRELGVIKPGPEVGRASGWVDVPFGISAYRRENGEYLVFVEEDARGKVMM YRWRPQ
Sequences:
>Translated_726_residues MRRLMRMAVAVCAATALAGAARAENVLPATTSWIGNTYGYGDGTWTQIDIRAIAVAPDGKVYTNAPWDESGAEASVYQDG KMLGFAGGTHGWGNAGGSAIAVNSRYAYVAIAVGNEKGRLVAPGVWPDKGRQWYGISRREIGDVKQAAPFRGAKAGDARA KLAASFLMVNEVPTDTRAEVAGLAASDSVLYASDPLHDAVNVYDAQTMQKKGSWNAHEPGRIALAADGTLWLLTDTLNGP AKLAHVRPDGRAIDDAPALPPDAQAVDVATDAKGRVLLADNGPRQQILIFSKSADGGYAMSGTLGERGGIFSGVAGRPGP QRFNGLTGVGVDRAGNVYVATNGIGPRHGTIGAGLGSTLESYAPDGRLRWQVQGLLFVDGAWIDPGRPNSVYTGNKRFEL DLSKPAGKEWKYAGFLSNRFKYPDDPVFNTDQWPGMPFARRVAGRTFLYLTDMHADHLKIYRFDPKRDGETAIPSGLLAG RARPVDKVPNRPPGGDWIWRDANGNGRIDEGEFELNTTGKGMAGGWGWWIDTGGDIWRTSDTRGIRRFRFGGLDKAGNPI YSYDKLTTYPSPAPFTELRRALYDASSDTLYVTGYTADAPRVGGLSKEVGRVLVRFDKWSSGAPVMRYQVALPWRLDAKP IFTLIGLTQEGRYLFGVEPVGTVHVYDKDNGRELGVIKPGPEVGRASGWVDVPFGISAYRRENGEYLVFVEEDARGKVMM YRWRPQ >Mature_726_residues MRRLMRMAVAVCAATALAGAARAENVLPATTSWIGNTYGYGDGTWTQIDIRAIAVAPDGKVYTNAPWDESGAEASVYQDG KMLGFAGGTHGWGNAGGSAIAVNSRYAYVAIAVGNEKGRLVAPGVWPDKGRQWYGISRREIGDVKQAAPFRGAKAGDARA KLAASFLMVNEVPTDTRAEVAGLAASDSVLYASDPLHDAVNVYDAQTMQKKGSWNAHEPGRIALAADGTLWLLTDTLNGP AKLAHVRPDGRAIDDAPALPPDAQAVDVATDAKGRVLLADNGPRQQILIFSKSADGGYAMSGTLGERGGIFSGVAGRPGP QRFNGLTGVGVDRAGNVYVATNGIGPRHGTIGAGLGSTLESYAPDGRLRWQVQGLLFVDGAWIDPGRPNSVYTGNKRFEL DLSKPAGKEWKYAGFLSNRFKYPDDPVFNTDQWPGMPFARRVAGRTFLYLTDMHADHLKIYRFDPKRDGETAIPSGLLAG RARPVDKVPNRPPGGDWIWRDANGNGRIDEGEFELNTTGKGMAGGWGWWIDTGGDIWRTSDTRGIRRFRFGGLDKAGNPI YSYDKLTTYPSPAPFTELRRALYDASSDTLYVTGYTADAPRVGGLSKEVGRVLVRFDKWSSGAPVMRYQVALPWRLDAKP IFTLIGLTQEGRYLFGVEPVGTVHVYDKDNGRELGVIKPGPEVGRASGWVDVPFGISAYRRENGEYLVFVEEDARGKVMM YRWRPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78587; Mature: 78587
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLMRMAVAVCAATALAGAARAENVLPATTSWIGNTYGYGDGTWTQIDIRAIAVAPDGK CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEEECCCCC VYTNAPWDESGAEASVYQDGKMLGFAGGTHGWGNAGGSAIAVNSRYAYVAIAVGNEKGRL EEECCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCE VAPGVWPDKGRQWYGISRREIGDVKQAAPFRGAKAGDARAKLAASFLMVNEVPTDTRAEV EECCCCCCCCCEEECCCHHHHCCHHHCCCCCCCCCCCHHHHHHEEEEEEECCCCCCHHHH AGLAASDSVLYASDPLHDAVNVYDAQTMQKKGSWNAHEPGRIALAADGTLWLLTDTLNGP EEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEECCCCC AKLAHVRPDGRAIDDAPALPPDAQAVDVATDAKGRVLLADNGPRQQILIFSKSADGGYAM EEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEECCCCCEEE SGTLGERGGIFSGVAGRPGPQRFNGLTGVGVDRAGNVYVATNGIGPRHGTIGAGLGSTLE ECCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHH SYAPDGRLRWQVQGLLFVDGAWIDPGRPNSVYTGNKRFELDLSKPAGKEWKYAGFLSNRF HHCCCCEEEEEEEEEEEECCEEECCCCCCCEEECCEEEEEEECCCCCCCEEEEEEHHCCC KYPDDPVFNTDQWPGMPFARRVAGRTFLYLTDMHADHLKIYRFDPKRDGETAIPSGLLAG CCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHC RARPVDKVPNRPPGGDWIWRDANGNGRIDEGEFELNTTGKGMAGGWGWWIDTGGDIWRTS CCCCHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEECC DTRGIRRFRFGGLDKAGNPIYSYDKLTTYPSPAPFTELRRALYDASSDTLYVTGYTADAP CCCCHHEEECCCCCCCCCCCEECCCEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCC RVGGLSKEVGRVLVRFDKWSSGAPVMRYQVALPWRLDAKPIFTLIGLTQEGRYLFGVEPV CCCCCHHHHCEEEEEEECCCCCCCEEEEEEECCEEECCCCEEEEEEECCCCCEEEECCCC GTVHVYDKDNGRELGVIKPGPEVGRASGWVDVPFGISAYRRENGEYLVFVEEDARGKVMM CEEEEEECCCCCEEEEECCCCCCCCCCCEEECCCCCCCEEECCCCEEEEEECCCCCCEEE YRWRPQ EEECCC >Mature Secondary Structure MRRLMRMAVAVCAATALAGAARAENVLPATTSWIGNTYGYGDGTWTQIDIRAIAVAPDGK CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEEECCCCC VYTNAPWDESGAEASVYQDGKMLGFAGGTHGWGNAGGSAIAVNSRYAYVAIAVGNEKGRL EEECCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCE VAPGVWPDKGRQWYGISRREIGDVKQAAPFRGAKAGDARAKLAASFLMVNEVPTDTRAEV EECCCCCCCCCEEECCCHHHHCCHHHCCCCCCCCCCCHHHHHHEEEEEEECCCCCCHHHH AGLAASDSVLYASDPLHDAVNVYDAQTMQKKGSWNAHEPGRIALAADGTLWLLTDTLNGP EEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEECCCCC AKLAHVRPDGRAIDDAPALPPDAQAVDVATDAKGRVLLADNGPRQQILIFSKSADGGYAM EEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEECCCCCEEE SGTLGERGGIFSGVAGRPGPQRFNGLTGVGVDRAGNVYVATNGIGPRHGTIGAGLGSTLE ECCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHH SYAPDGRLRWQVQGLLFVDGAWIDPGRPNSVYTGNKRFELDLSKPAGKEWKYAGFLSNRF HHCCCCEEEEEEEEEEEECCEEECCCCCCCEEECCEEEEEEECCCCCCCEEEEEEHHCCC KYPDDPVFNTDQWPGMPFARRVAGRTFLYLTDMHADHLKIYRFDPKRDGETAIPSGLLAG CCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHC RARPVDKVPNRPPGGDWIWRDANGNGRIDEGEFELNTTGKGMAGGWGWWIDTGGDIWRTS CCCCHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEECC DTRGIRRFRFGGLDKAGNPIYSYDKLTTYPSPAPFTELRRALYDASSDTLYVTGYTADAP CCCCHHEEECCCCCCCCCCCEECCCEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCC RVGGLSKEVGRVLVRFDKWSSGAPVMRYQVALPWRLDAKPIFTLIGLTQEGRYLFGVEPV CCCCCHHHHCEEEEEEECCCCCCCEEEEEEECCEEECCCCEEEEEEECCCCCEEEECCCC GTVHVYDKDNGRELGVIKPGPEVGRASGWVDVPFGISAYRRENGEYLVFVEEDARGKVMM CEEEEEECCCCCEEEEECCCCCCCCCCCEEECCCCCCCEEECCCCEEEEEECCCCCCEEE YRWRPQ EEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA