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The map label for this gene is ydbB [H]

Identifier: 53722710

GI number: 53722710

Start: 2324021

End: 2324401

Strand: Reverse

Name: ydbB [H]

Synonym: BPSS1690

Alternate gene names: 53722710

Gene position: 2324401-2324021 (Counterclockwise)

Preceding gene: 53722711

Following gene: 53722706

Centisome position: 73.26

GC content: 63.25

Gene sequence:

>381_bases
ATGTTTCAGGCAGGCATCGGCGTCAATTTCGAGGCAGCGTTGCGCGACGTGAGCGAGTATTGGTCGCCGCGCGTCGTCGG
GCGCGTGAACGACCAGTACGTGAAGGTCGCGAAGCTCAAGGGCGAATTCACGTGGCACAAGCACGCCGATGAGGACGAGA
TGTTCTACGTCGTCTACGGCCGCTTGCGCATTCAATTCGAAGGGCGCGACGACGTCGTGCTGAACCCGGGCGATTTCTGC
ATCGTGCCGAAGAACACGATGCACAACCCCGTTGCCGAAGCGGAGTGCGGGATCGCGCTGATCGAGACCGTCACGACGCG
GCACACGGGCGACACGCCGTCGCCGCTCGCGAAGAGCATCGACGCTCAGCTCGCCGGCTGA

Upstream 100 bases:

>100_bases
TGCTTCGCACCGCGTCGGGCCACGACGCATGCGTGTTCGGCGCGTTCGCGCGCTTGCTGCTAAGCTGCCGGCTCGAATAT
AGCGAACCAGGAGCGTCCCC

Downstream 100 bases:

>100_bases
TCCTCGCGCGCGCCGAGCGCCGCGCGCATGTCGCCGTACATCCAGCGCAGCGTTTCGTCGAGCGGCGTGCGGCGTGCGTC
GCCGATCGCCGCGCGCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MFQAGIGVNFEAALRDVSEYWSPRVVGRVNDQYVKVAKLKGEFTWHKHADEDEMFYVVYGRLRIQFEGRDDVVLNPGDFC
IVPKNTMHNPVAEAECGIALIETVTTRHTGDTPSPLAKSIDAQLAG

Sequences:

>Translated_126_residues
MFQAGIGVNFEAALRDVSEYWSPRVVGRVNDQYVKVAKLKGEFTWHKHADEDEMFYVVYGRLRIQFEGRDDVVLNPGDFC
IVPKNTMHNPVAEAECGIALIETVTTRHTGDTPSPLAKSIDAQLAG
>Mature_126_residues
MFQAGIGVNFEAALRDVSEYWSPRVVGRVNDQYVKVAKLKGEFTWHKHADEDEMFYVVYGRLRIQFEGRDDVVLNPGDFC
IVPKNTMHNPVAEAECGIALIETVTTRHTGDTPSPLAKSIDAQLAG

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SchB/CurC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR019780
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 14068; Mature: 14068

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQAGIGVNFEAALRDVSEYWSPRVVGRVNDQYVKVAKLKGEFTWHKHADEDEMFYVVYG
CCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCEEECCCCCCCCEEEEEEE
RLRIQFEGRDDVVLNPGDFCIVPKNTMHNPVAEAECGIALIETVTTRHTGDTPSPLAKSI
EEEEEECCCCCEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCHHHHHC
DAQLAG
CCCCCC
>Mature Secondary Structure
MFQAGIGVNFEAALRDVSEYWSPRVVGRVNDQYVKVAKLKGEFTWHKHADEDEMFYVVYG
CCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCEEECCCCCCCCEEEEEEE
RLRIQFEGRDDVVLNPGDFCIVPKNTMHNPVAEAECGIALIETVTTRHTGDTPSPLAKSI
EEEEEECCCCCEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCHHHHHC
DAQLAG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]