| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is fliY [H]
Identifier: 53722694
GI number: 53722694
Start: 2299893
End: 2300846
Strand: Reverse
Name: fliY [H]
Synonym: BPSS1674
Alternate gene names: 53722694
Gene position: 2300846-2299893 (Counterclockwise)
Preceding gene: 53722695
Following gene: 53722693
Centisome position: 72.51
GC content: 69.29
Gene sequence:
>954_bases ATGAAACTGCCCTATACGAAGTCGAAGTCGTTCGCCGCATCGCTCGCGCGTGCCGTCGTCGCGTTCGCGCTGGCCGGCAT CGGCGCGGCGGCGTTCGCCGCCACGTTCGACCTGAGCCCCGAGCAGCCCGGCCGCGTGCGCGGCGCGCGCGACGACGCGG TGATCCGCGCGCTGCCCGCCAGCTTCAAGTTCGTCGAGCCCGATACGCTGACCGTCGGCATCGCGCCGAGCCAGCCGCCC ATCAGCGCGTATGCGACCGATGCGCGCACCGTCGTCGGCTTCGACGCCGATCTCGCGCAACTGCTTGCCGACAGCCTCGG CCGCAAGCTGAAGATCGTCGCGCTCGCGTGGCCGGACTGGCCGCTCGCGCTCGAATCGGGCCGCGTCGACGCGGTGCTGT CGAACGTCACCGTCACCGAGGAGCGCAAGGCGAAGTTCGATTTCTCGACGTATCGCAAGGATCAGGTCGGCTTCTACGTG AAGTCCGACAGCAAGATCGCGTCGATCAGGCAGCCGAGAGACGTCGCGGGCCTGCGCGTGATCACCGACGCCGGCACGAA CCAGGAGAAGATCCTGCTCGAATGGGATCGCGAGAACGTCGCGCACGGGCTCAAGCCCGTCACGGTCCAGTACTACGACG ATCACGCGGTGAAGAGCGTCGCGTTGCAGGCCGGCCGCGCGGACGCGATCTTCAGCGTGAATTCGGTGCTCGCGTACCAG GCCGCGCAGCAGCACCGCACGAAGCTCGTCGGTGCGGTGAGCGGCGGGTGGCCGCGCACGGCCGACATCGCGGTCACGAC GCGCAGGGGCAGCGGCCTCGCGGCGCCGTTCACGCTTGCGATCAACGGTTTCATCCGCAACGGCACCTACCGGCGCGTGC TCGAGCGCTGGAGCCTCGGCTCCGAGGCGATCGACGCGTCGCGGACCAACCCGCCGGGCCTGCCGAAGACGTGA
Upstream 100 bases:
>100_bases GCGCCGGTCGAGTGACGGGCCGCGCGTCTCGCGCCCGGCTCGTTTGTCGCCTCGAACGCGGCCGTGCATGCGCCGCGAAC CTCCACCACAGGAATTGTCG
Downstream 100 bases:
>100_bases CGCGCGGCGGCGGCCCGCCGCGCCCGGCGGCCCGCCGCGGATCGGCAGGCGCCGCCGCTCATGAAGAAAGGCAAGCCGGC TGCGCCGGAGGCGGGCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MKLPYTKSKSFAASLARAVVAFALAGIGAAAFAATFDLSPEQPGRVRGARDDAVIRALPASFKFVEPDTLTVGIAPSQPP ISAYATDARTVVGFDADLAQLLADSLGRKLKIVALAWPDWPLALESGRVDAVLSNVTVTEERKAKFDFSTYRKDQVGFYV KSDSKIASIRQPRDVAGLRVITDAGTNQEKILLEWDRENVAHGLKPVTVQYYDDHAVKSVALQAGRADAIFSVNSVLAYQ AAQQHRTKLVGAVSGGWPRTADIAVTTRRGSGLAAPFTLAINGFIRNGTYRRVLERWSLGSEAIDASRTNPPGLPKT
Sequences:
>Translated_317_residues MKLPYTKSKSFAASLARAVVAFALAGIGAAAFAATFDLSPEQPGRVRGARDDAVIRALPASFKFVEPDTLTVGIAPSQPP ISAYATDARTVVGFDADLAQLLADSLGRKLKIVALAWPDWPLALESGRVDAVLSNVTVTEERKAKFDFSTYRKDQVGFYV KSDSKIASIRQPRDVAGLRVITDAGTNQEKILLEWDRENVAHGLKPVTVQYYDDHAVKSVALQAGRADAIFSVNSVLAYQ AAQQHRTKLVGAVSGGWPRTADIAVTTRRGSGLAAPFTLAINGFIRNGTYRRVLERWSLGSEAIDASRTNPPGLPKT >Mature_317_residues MKLPYTKSKSFAASLARAVVAFALAGIGAAAFAATFDLSPEQPGRVRGARDDAVIRALPASFKFVEPDTLTVGIAPSQPP ISAYATDARTVVGFDADLAQLLADSLGRKLKIVALAWPDWPLALESGRVDAVLSNVTVTEERKAKFDFSTYRKDQVGFYV KSDSKIASIRQPRDVAGLRVITDAGTNQEKILLEWDRENVAHGLKPVTVQYYDDHAVKSVALQAGRADAIFSVNSVLAYQ AAQQHRTKLVGAVSGGWPRTADIAVTTRRGSGLAAPFTLAINGFIRNGTYRRVLERWSLGSEAIDASRTNPPGLPKT
Specific function: Part of a binding-protein-dependent transport system for cystine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=237, Percent_Identity=32.9113924050633, Blast_Score=98, Evalue=8e-22, Organism=Escherichia coli, GI1787088, Length=248, Percent_Identity=24.5967741935484, Blast_Score=68, Evalue=7e-13,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 34097; Mature: 34097
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPYTKSKSFAASLARAVVAFALAGIGAAAFAATFDLSPEQPGRVRGARDDAVIRALPA CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCCCCCCCCCCHHEEECCC SFKFVEPDTLTVGIAPSQPPISAYATDARTVVGFDADLAQLLADSLGRKLKIVALAWPDW CCEEECCCEEEEEECCCCCCCCEECCCCEEEEECCHHHHHHHHHHCCCEEEEEEEECCCC PLALESGRVDAVLSNVTVTEERKAKFDFSTYRKDQVGFYVKSDSKIASIRQPRDVAGLRV CEEECCCCEEEEEECCEEECCHHCCCCHHHCCCCCCEEEEECCCCEECCCCCCCCCCEEE ITDAGTNQEKILLEWDRENVAHGLKPVTVQYYDDHAVKSVALQAGRADAIFSVNSVLAYQ EECCCCCCCEEEEEECCHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCEEEEHHHHHHHH AAQQHRTKLVGAVSGGWPRTADIAVTTRRGSGLAAPFTLAINGFIRNGTYRRVLERWSLG HHHHHHHHEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEEEHCCCHHHHHHHHHCCC SEAIDASRTNPPGLPKT CHHHCCCCCCCCCCCCC >Mature Secondary Structure MKLPYTKSKSFAASLARAVVAFALAGIGAAAFAATFDLSPEQPGRVRGARDDAVIRALPA CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCCCCCCCCCCHHEEECCC SFKFVEPDTLTVGIAPSQPPISAYATDARTVVGFDADLAQLLADSLGRKLKIVALAWPDW CCEEECCCEEEEEECCCCCCCCEECCCCEEEEECCHHHHHHHHHHCCCEEEEEEEECCCC PLALESGRVDAVLSNVTVTEERKAKFDFSTYRKDQVGFYVKSDSKIASIRQPRDVAGLRV CEEECCCCEEEEEECCEEECCHHCCCCHHHCCCCCCEEEEECCCCEECCCCCCCCCCEEE ITDAGTNQEKILLEWDRENVAHGLKPVTVQYYDDHAVKSVALQAGRADAIFSVNSVLAYQ EECCCCCCCEEEEEECCHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCEEEEHHHHHHHH AAQQHRTKLVGAVSGGWPRTADIAVTTRRGSGLAAPFTLAINGFIRNGTYRRVLERWSLG HHHHHHHHEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEEEHCCCHHHHHHHHHCCC SEAIDASRTNPPGLPKT CHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]