| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is ytmO [H]
Identifier: 53722693
GI number: 53722693
Start: 2298572
End: 2299573
Strand: Reverse
Name: ytmO [H]
Synonym: BPSS1673
Alternate gene names: 53722693
Gene position: 2299573-2298572 (Counterclockwise)
Preceding gene: 53722694
Following gene: 53722692
Centisome position: 72.47
GC content: 73.15
Gene sequence:
>1002_bases ATGTCTTATTCGTTATCGCTGCTGGACAAGAGCCCGATCGCCGAAGGCGCGACGGCGGCCGACGCGCTGCGCTTCACGGT CGCGCTCGCGCAGCGCGCCGAGGCGCTCGGCTATCGCCGCTTCTGGATCGCCGAGCATCATGGCGCGCCGGGGCTCGCGA GCTCCGCGCCCGAGATCGTCGTGTCGCATGTGCTCGCGCATACGTCGTCGATCCGCGTCGGCTCGGGCGGCGTGATGCTT CAGCACTACAGCCCGTTCAAGGTCGCCGAGACGTTCAAGCTGCTCGCGTCGCTCGCGCCCGGGCGCGTCGATCTCGGCGT CGGCAAGGCGCCGGGCGGCCTGCCGCTCACGACGCGCGCGCTGCAATCGCTGCACGACAAGCCGCGCCGGCCCGCGTTTG CCGAGCAGCTCGCCGAGCTCGACGCGTTCCTGAACTGGGGCGTCGCCGAGGATCATCCGCTCGCCGGCGCGCTCGCGCTG CCGGTGCCGCCCGAGGCGCCGGAGCGCGTGCTGCTCGGCGGCTCGCCCGAGAGCGCCGCGCTCGCCGCGCGGCTCGGCTG GCAGTTCTGCTATGCCGGGCACTTCAACGGCGACGAGGCGAACGTCGAGCGCTCGCTCGACGCCTACCGCAGCGCGACGG GGCGCGCGCCGCTGCTCGCGCTGTACGCGGTGGCCGCGCCGACGAAGGGCGACGCCGAGCGGCTGATCGGCGCGCTGCGG ATCTTCAAGCTGAAGCTCGCGAGCGGCCAGAGCGTCAATCTCGGCAGCGCGCAGGCGGCGGCCGAGTTCGCGCGCCAGAG CGGGGCGACCGACTATCGGATCGACGAACTGCGTCCGCACGTGATCGCCGGCGCGCCGGACGACGTGCACCGCGAGCTCG ACGCACTGTCGCGCCGCTACGGGCTCGCCGAGTTCGTCGTCGATTCGCCCGTCACGCACTATCCGGCGCGGCTCGCGTCC GTCGAGCTGCTCGCGCCGCAGCGGCAGCCCGCGGGAACCTGA
Upstream 100 bases:
>100_bases CGCGCGCAGGCCGGGCGGCCGGGCGGCGCGTTCGGGTGGCGCGCCGCCGGATCGCCTGTTTCTTTCGACTGATTTTCCCT AGCCCGCATTCGTACCCGCC
Downstream 100 bases:
>100_bases GCGCCCGAGGCGGCGCGCGCATCCTCCTCCGATCCCAACGACATCGAACTTCGCCATGACCCAGTCCACGATTCCATTCG GCATCATGCTGCAAGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MSYSLSLLDKSPIAEGATAADALRFTVALAQRAEALGYRRFWIAEHHGAPGLASSAPEIVVSHVLAHTSSIRVGSGGVML QHYSPFKVAETFKLLASLAPGRVDLGVGKAPGGLPLTTRALQSLHDKPRRPAFAEQLAELDAFLNWGVAEDHPLAGALAL PVPPEAPERVLLGGSPESAALAARLGWQFCYAGHFNGDEANVERSLDAYRSATGRAPLLALYAVAAPTKGDAERLIGALR IFKLKLASGQSVNLGSAQAAAEFARQSGATDYRIDELRPHVIAGAPDDVHRELDALSRRYGLAEFVVDSPVTHYPARLAS VELLAPQRQPAGT
Sequences:
>Translated_333_residues MSYSLSLLDKSPIAEGATAADALRFTVALAQRAEALGYRRFWIAEHHGAPGLASSAPEIVVSHVLAHTSSIRVGSGGVML QHYSPFKVAETFKLLASLAPGRVDLGVGKAPGGLPLTTRALQSLHDKPRRPAFAEQLAELDAFLNWGVAEDHPLAGALAL PVPPEAPERVLLGGSPESAALAARLGWQFCYAGHFNGDEANVERSLDAYRSATGRAPLLALYAVAAPTKGDAERLIGALR IFKLKLASGQSVNLGSAQAAAEFARQSGATDYRIDELRPHVIAGAPDDVHRELDALSRRYGLAEFVVDSPVTHYPARLAS VELLAPQRQPAGT >Mature_332_residues SYSLSLLDKSPIAEGATAADALRFTVALAQRAEALGYRRFWIAEHHGAPGLASSAPEIVVSHVLAHTSSIRVGSGGVMLQ HYSPFKVAETFKLLASLAPGRVDLGVGKAPGGLPLTTRALQSLHDKPRRPAFAEQLAELDAFLNWGVAEDHPLAGALALP VPPEAPERVLLGGSPESAALAARLGWQFCYAGHFNGDEANVERSLDAYRSATGRAPLLALYAVAAPTKGDAERLIGALRI FKLKLASGQSVNLGSAQAAAEFARQSGATDYRIDELRPHVIAGAPDDVHRELDALSRRYGLAEFVVDSPVTHYPARLASV ELLAPQRQPAGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=330, Percent_Identity=34.5454545454545, Blast_Score=150, Evalue=8e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 35238; Mature: 35107
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYSLSLLDKSPIAEGATAADALRFTVALAQRAEALGYRRFWIAEHHGAPGLASSAPEIV CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHH VSHVLAHTSSIRVGSGGVMLQHYSPFKVAETFKLLASLAPGRVDLGVGKAPGGLPLTTRA HHHHHHHCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHH LQSLHDKPRRPAFAEQLAELDAFLNWGVAEDHPLAGALALPVPPEAPERVLLGGSPESAA HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCHHH LAARLGWQFCYAGHFNGDEANVERSLDAYRSATGRAPLLALYAVAAPTKGDAERLIGALR HHHHHCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHH IFKLKLASGQSVNLGSAQAAAEFARQSGATDYRIDELRPHVIAGAPDDVHRELDALSRRY HHHEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCEEEECCCHHHHHHHHHHHHHH GLAEFVVDSPVTHYPARLASVELLAPQRQPAGT CHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCC >Mature Secondary Structure SYSLSLLDKSPIAEGATAADALRFTVALAQRAEALGYRRFWIAEHHGAPGLASSAPEIV CCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHH VSHVLAHTSSIRVGSGGVMLQHYSPFKVAETFKLLASLAPGRVDLGVGKAPGGLPLTTRA HHHHHHHCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHH LQSLHDKPRRPAFAEQLAELDAFLNWGVAEDHPLAGALALPVPPEAPERVLLGGSPESAA HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCHHH LAARLGWQFCYAGHFNGDEANVERSLDAYRSATGRAPLLALYAVAAPTKGDAERLIGALR HHHHHCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHH IFKLKLASGQSVNLGSAQAAAEFARQSGATDYRIDELRPHVIAGAPDDVHRELDALSRRY HHHEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCEEEECCCHHHHHHHHHHHHHH GLAEFVVDSPVTHYPARLASVELLAPQRQPAGT CHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]