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The map label for this gene is hrpA [H]

Identifier: 53722626

GI number: 53722626

Start: 2178792

End: 2180597

Strand: Reverse

Name: hrpA [H]

Synonym: BPSS1603

Alternate gene names: 53722626

Gene position: 2180597-2178792 (Counterclockwise)

Preceding gene: 53722627

Following gene: 53722624

Centisome position: 68.72

GC content: 78.68

Gene sequence:

>1806_bases
GTGACGCGGCGCGCGGCCGCATCGGCTGCCGCCGTCGCGCTCGCGCTCGCGAGCCATGCGGCGGCGCTGCGGGCGGTGCC
GCTCGCGTGGCCGCTCGCGCGTTTCGACTATCGCGTCGGCCCGGTGAACGCCGCCGATGCATTGGGCGAGCTGAGCCGCC
GCTCGGGCATCGCCATCGACGTTGACGCGCGCGCGCCGTGCCGGCTCGACGTGCGCGAGGCGCTGCCGCCGCGGCGCTTC
GTCGAGCGGCTCGCGCGCACCTGCGGGCTCGTGTCGTACTACGACGGCGCGGTGTTGCAGCTCGTCGCGCCCGACGCGTT
CGAGCACGCGGCGGTGCGGCTCAATTACGCGACGCTCGCCGAGCTGCGCGCGGCGCTCGCGCGGCAGCGGATCGTCGACG
CGCGCTGGCGGCCCGGCTATGACGACGCGGCGCGGATCGCGCGCGTCGCCGGCCCGCCGCGCTATGTCGCGCTCGTGCTC
GCCGCCGCGCGCGCGCTCGACGAGGCCGCGCAGACGCGCGTGCGCACCGAGACGCGCGCGTTCCGGCTGCGCGCGCGCGC
GGCGGCCGACCGCGTCGTGCGCGGCGATGGCGACGGCGACGATGCGGTGCTGCCCGGGCTCGCGACGCGACTGCGCCGCC
GGCTCGAGCAGGACGGCGCCGCGCCGCGCGCGGTGCCGGGCGTGCGCGAATTCACCGCATCGTTGCCGATCGTCGACGCG
GACGCACGCTCGAACACCGTGCTGATCCGCGACGTGCCCGCACGGCTCGCGCGCGACGCGCGGCTCGTCGCGCAGCTCGA
TACGCGGCCCGCGTCGATCCGGATCGACGCGTTCGGCGCAACGCTCGCGCCCGCGCAGCTCGACGCGCTCGGGCTGCGAT
GGCGCGACGGCGCGCTGGCTTCGGGCGCGTCGCGCGATGCGGGCGTCGCGCGCGACGGTTCGCGTGCGTCGGTGGGCGTC
CGGCCCGTGGGCGCGTCCCGCCCGTCCGGCGCGCGGAACGAGGCGGCCGCGGCGGGGGCGCGGCGTGCGCCCGCGGTGTC
CGCCGCACCCGACGCGTCGGGCGCATCCGCCGCATCCGGCCCATCCGGCCCATCCGCCGCCTCAGGCGCTCCCGACGCCG
TCGACGCATCCGCCGGCTCGGCCGACTCTCCCCGCGCATCCGCGGTGCGCATCGCGATCGTGTCCACGCCTGCCGGCTGC
GCGCCGGTGCGCGCGCGCATCGCCGAGCTTGCCGCGCACGGCGACGCGTCGATCGACGCCGACGACTCGACGCTGGCGCT
TCCCGATAGCCGCGCGGATTTCGGCCGGCTGCGGCTGTCGTTCGTCGCGTCGGGCGATGGCGACGCGCGCGCGCTCGATG
CGCGGCGCAACGGTTTCGCGATGCGGGTCACGCCGCACGAGACCGCGCAGCCGGCGCGCTACGCGCTCGACATACGGATC
GTCGAGCGTCGGGCCGACGGCGACGCGGCTGGCGCGTCGTCGCGCGAAACCGTGGCCGGCGTGATGCTCGCGGCGGGCGA
GTGCGCGGCGCTCGCGCTGCCGTCGGCCGCGCACGGCGAGCAACGGCTCGTGCTGGTGACGCCGCGAACGGTGCCGGCCG
ATCCGGCGCGCTTGCCGCCGCAGGCCTCGCCGAACGCGCCGGCGGCCGCGGCCGCGGCCGTCGCCGCCAACGCGCGTGGA
CCCGACACCGCCGAGCCCGCGGCGCGCGCGCATGCGGCCGCGCGCGCGCATCCGCCGGCGGCGGCGCTGCCTTCACCGTC
CGCCGGCCTCGGCTTGCGGGCGCAGACCCGCCTGCTCGGCAATTGA

Upstream 100 bases:

>100_bases
GGCTGAAGGCGGCGGGCATCGGCTGGACCGTGCATGCGGCGTACGCGACCGGCTACCGCCTGAACCTCGGCGCGGACGCG
GAAACGGCGGACCGCGCGTC

Downstream 100 bases:

>100_bases
CGCGAATCCCGCCGTGATTAAACGGCGCTCAATCAACGGTCATCAAACGTCGATCGCGCACGATTTAGGCGCACGATGGC
AATCGCCTTTTGAAATTAAC

Product: secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 601; Mature: 600

Protein sequence:

>601_residues
MTRRAAASAAAVALALASHAAALRAVPLAWPLARFDYRVGPVNAADALGELSRRSGIAIDVDARAPCRLDVREALPPRRF
VERLARTCGLVSYYDGAVLQLVAPDAFEHAAVRLNYATLAELRAALARQRIVDARWRPGYDDAARIARVAGPPRYVALVL
AAARALDEAAQTRVRTETRAFRLRARAAADRVVRGDGDGDDAVLPGLATRLRRRLEQDGAAPRAVPGVREFTASLPIVDA
DARSNTVLIRDVPARLARDARLVAQLDTRPASIRIDAFGATLAPAQLDALGLRWRDGALASGASRDAGVARDGSRASVGV
RPVGASRPSGARNEAAAAGARRAPAVSAAPDASGASAASGPSGPSAASGAPDAVDASAGSADSPRASAVRIAIVSTPAGC
APVRARIAELAAHGDASIDADDSTLALPDSRADFGRLRLSFVASGDGDARALDARRNGFAMRVTPHETAQPARYALDIRI
VERRADGDAAGASSRETVAGVMLAAGECAALALPSAAHGEQRLVLVTPRTVPADPARLPPQASPNAPAAAAAAVAANARG
PDTAEPAARAHAAARAHPPAAALPSPSAGLGLRAQTRLLGN

Sequences:

>Translated_601_residues
MTRRAAASAAAVALALASHAAALRAVPLAWPLARFDYRVGPVNAADALGELSRRSGIAIDVDARAPCRLDVREALPPRRF
VERLARTCGLVSYYDGAVLQLVAPDAFEHAAVRLNYATLAELRAALARQRIVDARWRPGYDDAARIARVAGPPRYVALVL
AAARALDEAAQTRVRTETRAFRLRARAAADRVVRGDGDGDDAVLPGLATRLRRRLEQDGAAPRAVPGVREFTASLPIVDA
DARSNTVLIRDVPARLARDARLVAQLDTRPASIRIDAFGATLAPAQLDALGLRWRDGALASGASRDAGVARDGSRASVGV
RPVGASRPSGARNEAAAAGARRAPAVSAAPDASGASAASGPSGPSAASGAPDAVDASAGSADSPRASAVRIAIVSTPAGC
APVRARIAELAAHGDASIDADDSTLALPDSRADFGRLRLSFVASGDGDARALDARRNGFAMRVTPHETAQPARYALDIRI
VERRADGDAAGASSRETVAGVMLAAGECAALALPSAAHGEQRLVLVTPRTVPADPARLPPQASPNAPAAAAAAVAANARG
PDTAEPAARAHAAARAHPPAAALPSPSAGLGLRAQTRLLGN
>Mature_600_residues
TRRAAASAAAVALALASHAAALRAVPLAWPLARFDYRVGPVNAADALGELSRRSGIAIDVDARAPCRLDVREALPPRRFV
ERLARTCGLVSYYDGAVLQLVAPDAFEHAAVRLNYATLAELRAALARQRIVDARWRPGYDDAARIARVAGPPRYVALVLA
AARALDEAAQTRVRTETRAFRLRARAAADRVVRGDGDGDDAVLPGLATRLRRRLEQDGAAPRAVPGVREFTASLPIVDAD
ARSNTVLIRDVPARLARDARLVAQLDTRPASIRIDAFGATLAPAQLDALGLRWRDGALASGASRDAGVARDGSRASVGVR
PVGASRPSGARNEAAAAGARRAPAVSAAPDASGASAASGPSGPSAASGAPDAVDASAGSADSPRASAVRIAIVSTPAGCA
PVRARIAELAAHGDASIDADDSTLALPDSRADFGRLRLSFVASGDGDARALDARRNGFAMRVTPHETAQPARYALDIRIV
ERRADGDAAGASSRETVAGVMLAAGECAALALPSAAHGEQRLVLVTPRTVPADPARLPPQASPNAPAAAAAAVAANARGP
DTAEPAARAHAAARAHPPAAALPSPSAGLGLRAQTRLLGN

Specific function: Involved in the secretion of a proteinaceous elicitor of the hypersensitivity response in plants [H]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR004845
- InterPro:   IPR003522 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 61549; Mature: 61418

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRAAASAAAVALALASHAAALRAVPLAWPLARFDYRVGPVNAADALGELSRRSGIAID
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCHHHHHHHHHHHCCCEEE
VDARAPCRLDVREALPPRRFVERLARTCGLVSYYDGAVLQLVAPDAFEHAAVRLNYATLA
ECCCCCCCCCHHHCCCHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCCEEEECHHHHH
ELRAALARQRIVDARWRPGYDDAARIARVAGPPRYVALVLAAARALDEAAQTRVRTETRA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRLRARAAADRVVRGDGDGDDAVLPGLATRLRRRLEQDGAAPRAVPGVREFTASLPIVDA
HHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEC
DARSNTVLIRDVPARLARDARLVAQLDTRPASIRIDAFGATLAPAQLDALGLRWRDGALA
CCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHCCEECCCCCC
SGASRDAGVARDGSRASVGVRPVGASRPSGARNEAAAAGARRAPAVSAAPDASGASAASG
CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
PSGPSAASGAPDAVDASAGSADSPRASAVRIAIVSTPAGCAPVRARIAELAAHGDASIDA
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCC
DDSTLALPDSRADFGRLRLSFVASGDGDARALDARRNGFAMRVTPHETAQPARYALDIRI
CCCEEECCCCCCCCCEEEEEEEECCCCCCEEEHHCCCCEEEEECCCCCCCCCCEEEEEEE
VERRADGDAAGASSRETVAGVMLAAGECAALALPSAAHGEQRLVLVTPRTVPADPARLPP
EEECCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCC
QASPNAPAAAAAAVAANARGPDTAEPAARAHAAARAHPPAAALPSPSAGLGLRAQTRLLG
CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHCC
N
C
>Mature Secondary Structure 
TRRAAASAAAVALALASHAAALRAVPLAWPLARFDYRVGPVNAADALGELSRRSGIAID
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCHHHHHHHHHHHCCCEEE
VDARAPCRLDVREALPPRRFVERLARTCGLVSYYDGAVLQLVAPDAFEHAAVRLNYATLA
ECCCCCCCCCHHHCCCHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCCEEEECHHHHH
ELRAALARQRIVDARWRPGYDDAARIARVAGPPRYVALVLAAARALDEAAQTRVRTETRA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRLRARAAADRVVRGDGDGDDAVLPGLATRLRRRLEQDGAAPRAVPGVREFTASLPIVDA
HHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEC
DARSNTVLIRDVPARLARDARLVAQLDTRPASIRIDAFGATLAPAQLDALGLRWRDGALA
CCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHCCEECCCCCC
SGASRDAGVARDGSRASVGVRPVGASRPSGARNEAAAAGARRAPAVSAAPDASGASAASG
CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
PSGPSAASGAPDAVDASAGSADSPRASAVRIAIVSTPAGCAPVRARIAELAAHGDASIDA
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCC
DDSTLALPDSRADFGRLRLSFVASGDGDARALDARRNGFAMRVTPHETAQPARYALDIRI
CCCEEECCCCCCCCCEEEEEEEECCCCCCEEEHHCCCCEEEEECCCCCCCCCCEEEEEEE
VERRADGDAAGASSRETVAGVMLAAGECAALALPSAAHGEQRLVLVTPRTVPADPARLPP
EEECCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCC
QASPNAPAAAAAAVAANARGPDTAEPAARAHAAARAHPPAAALPSPSAGLGLRAQTRLLG
CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1472716; 7623665; 11823852 [H]