Click here to switch to the map view.

The map label for this gene is 53722624

Identifier: 53722624

GI number: 53722624

Start: 2176601

End: 2177170

Strand: Reverse

Name: 53722624

Synonym: BPSS1601

Alternate gene names: NA

Gene position: 2177170-2176601 (Counterclockwise)

Preceding gene: 53722626

Following gene: 53722623

Centisome position: 68.62

GC content: 74.04

Gene sequence:

>570_bases
ATGATGCACGGCGCCACGGTCGCCGCGGCCGCGTTCATCGCGTTCGCGCTTTTTGCAACCGATTGCGCGGCGAGCGGTCC
GCCCGCCGGCACCGATCCGGCACCGGGCGGCGCATTCGCCGAGCGTTTCGATCACGCGCCGCTGACGGCGCCGCGCGTCG
ACGTGGTTCGCGCGCCGCAGACGGCGGCGCCGGCGGGGGCCAGCCGCGCCGCGGACACGGTGCCCGCGGCGCAGCCGCCG
GCCGGCGCGGCGGCGACGGCCGGCCAGCCGCCGGTCGCGGACATGCCGGTCGCGGACGTACCCCTTCGAACCCTGCCCGC
ATGGGACGTGCGCGTCTCCGACGGCACGATTCGCGGGGTGTTGTCGCGATGGGCGAACACGGCGGGCTGGCAGCTCGTCT
GGGACGCGCCCGTCGATTTCAGCATCGATGCGCAGGCGACGCTGCGCGGCTCGTTCGAGGATGCGCTGCAGGCGCTCGTC
GCGAGCCTCGGCCGTACGTCGACGCCGATCCAGGCGATTCTCTATCGAGGCAATCACGTGTTGCGCGTCGTCGCGCAAGG
AGCGGGCTGA

Upstream 100 bases:

>100_bases
CGAAGGCAGTCCGACGCGTCGGACGCGGCATCGGGATGCGTCGGGCGGCAAAGCGCGGGGGCCAGCGGCGCACGGCAGCA
GTCGAGTAACGAGGAAAATC

Downstream 100 bases:

>100_bases
TGCGCGTGCTGTTCGCCATTTCATTGCTGGCCGTCGCATGGCTCGCCGGCTGCACCGGCCTTCGCGGCGGCATCGAGCGC
GACGCGCGGCGCGATTCGAA

Product: type IV pilus biosynthesis protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MMHGATVAAAAFIAFALFATDCAASGPPAGTDPAPGGAFAERFDHAPLTAPRVDVVRAPQTAAPAGASRAADTVPAAQPP
AGAAATAGQPPVADMPVADVPLRTLPAWDVRVSDGTIRGVLSRWANTAGWQLVWDAPVDFSIDAQATLRGSFEDALQALV
ASLGRTSTPIQAILYRGNHVLRVVAQGAG

Sequences:

>Translated_189_residues
MMHGATVAAAAFIAFALFATDCAASGPPAGTDPAPGGAFAERFDHAPLTAPRVDVVRAPQTAAPAGASRAADTVPAAQPP
AGAAATAGQPPVADMPVADVPLRTLPAWDVRVSDGTIRGVLSRWANTAGWQLVWDAPVDFSIDAQATLRGSFEDALQALV
ASLGRTSTPIQAILYRGNHVLRVVAQGAG
>Mature_189_residues
MMHGATVAAAAFIAFALFATDCAASGPPAGTDPAPGGAFAERFDHAPLTAPRVDVVRAPQTAAPAGASRAADTVPAAQPP
AGAAATAGQPPVADMPVADVPLRTLPAWDVRVSDGTIRGVLSRWANTAGWQLVWDAPVDFSIDAQATLRGSFEDALQALV
ASLGRTSTPIQAILYRGNHVLRVVAQGAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19155; Mature: 19155

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHGATVAAAAFIAFALFATDCAASGPPAGTDPAPGGAFAERFDHAPLTAPRVDVVRAPQ
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEECCC
TAAPAGASRAADTVPAAQPPAGAAATAGQPPVADMPVADVPLRTLPAWDVRVSDGTIRGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHH
LSRWANTAGWQLVWDAPVDFSIDAQATLRGSFEDALQALVASLGRTSTPIQAILYRGNHV
HHHHCCCCCCEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCEE
LRVVAQGAG
EEEEECCCC
>Mature Secondary Structure
MMHGATVAAAAFIAFALFATDCAASGPPAGTDPAPGGAFAERFDHAPLTAPRVDVVRAPQ
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEECCC
TAAPAGASRAADTVPAAQPPAGAAATAGQPPVADMPVADVPLRTLPAWDVRVSDGTIRGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHH
LSRWANTAGWQLVWDAPVDFSIDAQATLRGSFEDALQALVASLGRTSTPIQAILYRGNHV
HHHHCCCCCCEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCEE
LRVVAQGAG
EEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA