| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722515
Identifier: 53722515
GI number: 53722515
Start: 2036034
End: 2037980
Strand: Reverse
Name: 53722515
Synonym: BPSS1493
Alternate gene names: NA
Gene position: 2037980-2036034 (Counterclockwise)
Preceding gene: 53722516
Following gene: 53722505
Centisome position: 64.23
GC content: 72.11
Gene sequence:
>1947_bases ATGAGCGAACGGCGCCCGCCCGGCGGCGCGGCGGCGCGCGCGCGCATGCCGATCGATGTCGAAGCGCTCGCCGTGCTGGG GCGCACGGACATCGATTCCGCCATGCCCGCGGGCGCCGACGTGCGCGCCGACGCGAGGTTCGACGCGCTGCACGCGGAGC TTGCGAAGCTCGCGTCGCCGGGCGCGAGCGGGCAAGTCGATTGGCGCGCGGCGACGCATCTCGCCGCCGAATTGCTGCGC GAGCGCGGCAAGGATTTGCTCGTCGGCTGCTATCTGGCGGGTGCGTTGCTGCAGACGGGCGGCGCGGCGGGGCTGCGCTG CGGACTCGAAATCGTCGGCGATCTCGTCGAACGTCATTGGGATGCGATGTCGCCGCCCGTGTCGCGGATGCGGGCGAGGC GCGGGGCGCTGCAATGGCTGGTCGATCGCGTCGACGCCATGCACGATGCAGGAGCCGCGGCATGCGGCGGCGCGTGCTCG GCCGAACTGGTCGCGCAATTGCGCGCGGCCGCGCGGCGCATCGATGCGCTGCTCGCCGAGCGCGACGACGACGCGCCGAC GATGCGCGCGGTGCATGCGTTCGCGGAGCGATTGCCGGTTGAGGTGGTTGAGGTGGTGGAAGTGGCTGACGAGGCTGATG TGGCTGATGTGGCTGAGGCGACTGAGGCGACTGAGGCGACTGAGGCGACTGAGGCGACTGAGGCGACTGAGGCGGCTGAT GTGGCTGAGACGGCTGAGACGGCTGAGACGGCTGAGACGGCCGAGACGGCCGAGACGGCCGAGACGGCCGAGACGGCCGA GACGGCCGAGGCCGATGCGCACGGCTCGACGGGAGGGCCGGCTGCGGAAATCGCGATTGCCGCCGCCGAACAGGCTTTGA TTGATCCGGCCGGTCGAGCCGCGCCGAGCGCAGGCACGGATACGAACGCGAACGCAGACGCCGCCGGGCAACCGGCGCGG CTCGACGAAGCGGCCGGCCGCGAACGCGCGCTCGCCGATGCGCTCGCGCAATTGCATTGCGTCGCGACGGCGTTCGCGCA AGCGGACTGGGCCGACGCGCGCGGCTTCCGGCTGCGCCGCGTCGCGTGCTGGTCGAGCGTGTGCGCGCTGCCGGAAACGG ACGCGGAGAACGGAAGAACGCGGATCGCCGCGCCGAGCGCTTCGATCGTCGGCGCGGCGAAGAGCATCGACGGGGATGGC GAGCCCGTGGCGGCGGTGCGCTTCGCCGAAGCGCATGCGCAGGCGTTCCCGCTCTGGCTGGATTTGCAGCGCATCGCCGC GCGCGCGCTCGCGCGCGCGGGGGGCGACGGCGCCGATGCGCGGCGCGAAGTGGAGACGGCGGTTCGTGCGCTGCTTGCGC GGCTGCCGGGCCTCGACGCGCTGACGTTCGCGGACGGCACGCCGTTCGCCGACGACGCGACGCGCGCATGGCTCGGCGAG CTTGGCGCGCCTGTTGTGGCGGCGGATGCGGTGTCGCCGTCGTCTTTGCCGCTTTCGCCGCGACCTTCGCCGCCTGAGCG ATCGTCGCCGATGGCGGGCGAACCGGCGCGCGCGCCGGGCGATGCGTGCGGGGCGAGCGCCGACGATGCAGTGGACCGAG CGTGCGCGTTTGCCGCGAGCGGCCAGCTCGATCTCGCGCTCCACGCGATTCAGCATGCGATCGATCGTGCGACGAGCGCC GAACAGCGGTTGAGAGCACGCGTGCGGTTGTGCGAGCTTGCGCGCGACCATTGGCCGCATGAGGTTCCTGAGGCGTTCGC GCGCGGCGTGATCGAACCGATTCGGCGGCACGATTTGCTCGCATGGAATCCGGAGCTGGCGCTCGACGGCTTGTCGGCCG CCTATGCGCTGCTGATTCGGCGCGATCGCGAATCGGCGCACGCGAGGACGGTGCTTGACGAGATCGCGAGCGTCGACGCG GCGCGGGCCATGCGTTTGTCGACGTGA
Upstream 100 bases:
>100_bases GCAAGAAAATCGAGAAGGATCCGAAGCATCCCGAACTGATTCGAACCGAGCGGGGCGTCGGCTACTACTTCGACGCGAAA GAGGTGGAGACGCTATGGGG
Downstream 100 bases:
>100_bases CGCGTTACGCGCGAGACCGTGTGTGGCGAAGCGCACGCCCGCGCTTGCGCGCGGCGTGCCGGTGCGAAGCGATCGTTCTC GGACGTGACGGGCGCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: ImpA-Like; ImpA-Like N-Terminal Family Protein; ImpA-Related N-Terminal Family Protein
Number of amino acids: Translated: 648; Mature: 647
Protein sequence:
>648_residues MSERRPPGGAAARARMPIDVEALAVLGRTDIDSAMPAGADVRADARFDALHAELAKLASPGASGQVDWRAATHLAAELLR ERGKDLLVGCYLAGALLQTGGAAGLRCGLEIVGDLVERHWDAMSPPVSRMRARRGALQWLVDRVDAMHDAGAAACGGACS AELVAQLRAAARRIDALLAERDDDAPTMRAVHAFAERLPVEVVEVVEVADEADVADVAEATEATEATEATEATEATEAAD VAETAETAETAETAETAETAETAETAETAEADAHGSTGGPAAEIAIAAAEQALIDPAGRAAPSAGTDTNANADAAGQPAR LDEAAGRERALADALAQLHCVATAFAQADWADARGFRLRRVACWSSVCALPETDAENGRTRIAAPSASIVGAAKSIDGDG EPVAAVRFAEAHAQAFPLWLDLQRIAARALARAGGDGADARREVETAVRALLARLPGLDALTFADGTPFADDATRAWLGE LGAPVVAADAVSPSSLPLSPRPSPPERSSPMAGEPARAPGDACGASADDAVDRACAFAASGQLDLALHAIQHAIDRATSA EQRLRARVRLCELARDHWPHEVPEAFARGVIEPIRRHDLLAWNPELALDGLSAAYALLIRRDRESAHARTVLDEIASVDA ARAMRLST
Sequences:
>Translated_648_residues MSERRPPGGAAARARMPIDVEALAVLGRTDIDSAMPAGADVRADARFDALHAELAKLASPGASGQVDWRAATHLAAELLR ERGKDLLVGCYLAGALLQTGGAAGLRCGLEIVGDLVERHWDAMSPPVSRMRARRGALQWLVDRVDAMHDAGAAACGGACS AELVAQLRAAARRIDALLAERDDDAPTMRAVHAFAERLPVEVVEVVEVADEADVADVAEATEATEATEATEATEATEAAD VAETAETAETAETAETAETAETAETAETAEADAHGSTGGPAAEIAIAAAEQALIDPAGRAAPSAGTDTNANADAAGQPAR LDEAAGRERALADALAQLHCVATAFAQADWADARGFRLRRVACWSSVCALPETDAENGRTRIAAPSASIVGAAKSIDGDG EPVAAVRFAEAHAQAFPLWLDLQRIAARALARAGGDGADARREVETAVRALLARLPGLDALTFADGTPFADDATRAWLGE LGAPVVAADAVSPSSLPLSPRPSPPERSSPMAGEPARAPGDACGASADDAVDRACAFAASGQLDLALHAIQHAIDRATSA EQRLRARVRLCELARDHWPHEVPEAFARGVIEPIRRHDLLAWNPELALDGLSAAYALLIRRDRESAHARTVLDEIASVDA ARAMRLST >Mature_647_residues SERRPPGGAAARARMPIDVEALAVLGRTDIDSAMPAGADVRADARFDALHAELAKLASPGASGQVDWRAATHLAAELLRE RGKDLLVGCYLAGALLQTGGAAGLRCGLEIVGDLVERHWDAMSPPVSRMRARRGALQWLVDRVDAMHDAGAAACGGACSA ELVAQLRAAARRIDALLAERDDDAPTMRAVHAFAERLPVEVVEVVEVADEADVADVAEATEATEATEATEATEATEAADV AETAETAETAETAETAETAETAETAETAEADAHGSTGGPAAEIAIAAAEQALIDPAGRAAPSAGTDTNANADAAGQPARL DEAAGRERALADALAQLHCVATAFAQADWADARGFRLRRVACWSSVCALPETDAENGRTRIAAPSASIVGAAKSIDGDGE PVAAVRFAEAHAQAFPLWLDLQRIAARALARAGGDGADARREVETAVRALLARLPGLDALTFADGTPFADDATRAWLGEL GAPVVAADAVSPSSLPLSPRPSPPERSSPMAGEPARAPGDACGASADDAVDRACAFAASGQLDLALHAIQHAIDRATSAE QRLRARVRLCELARDHWPHEVPEAFARGVIEPIRRHDLLAWNPELALDGLSAAYALLIRRDRESAHARTVLDEIASVDAA RAMRLST
Specific function: Unknown
COG id: COG3515
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67315; Mature: 67184
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERRPPGGAAARARMPIDVEALAVLGRTDIDSAMPAGADVRADARFDALHAELAKLASP CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCC GASGQVDWRAATHLAAELLRERGKDLLVGCYLAGALLQTGGAAGLRCGLEIVGDLVERHW CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH DAMSPPVSRMRARRGALQWLVDRVDAMHDAGAAACGGACSAELVAQLRAAARRIDALLAE HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHC RDDDAPTMRAVHAFAERLPVEVVEVVEVADEADVADVAEATEATEATEATEATEATEAAD CCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VAETAETAETAETAETAETAETAETAETAEADAHGSTGGPAAEIAIAAAEQALIDPAGRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC APSAGTDTNANADAAGQPARLDEAAGRERALADALAQLHCVATAFAQADWADARGFRLRR CCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VACWSSVCALPETDAENGRTRIAAPSASIVGAAKSIDGDGEPVAAVRFAEAHAQAFPLWL HHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH DLQRIAARALARAGGDGADARREVETAVRALLARLPGLDALTFADGTPFADDATRAWLGE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHH LGAPVVAADAVSPSSLPLSPRPSPPERSSPMAGEPARAPGDACGASADDAVDRACAFAAS CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC GQLDLALHAIQHAIDRATSAEQRLRARVRLCELARDHWPHEVPEAFARGVIEPIRRHDLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCE AWNPELALDGLSAAYALLIRRDRESAHARTVLDEIASVDAARAMRLST EECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SERRPPGGAAARARMPIDVEALAVLGRTDIDSAMPAGADVRADARFDALHAELAKLASP CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCC GASGQVDWRAATHLAAELLRERGKDLLVGCYLAGALLQTGGAAGLRCGLEIVGDLVERHW CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH DAMSPPVSRMRARRGALQWLVDRVDAMHDAGAAACGGACSAELVAQLRAAARRIDALLAE HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHC RDDDAPTMRAVHAFAERLPVEVVEVVEVADEADVADVAEATEATEATEATEATEATEAAD CCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VAETAETAETAETAETAETAETAETAETAEADAHGSTGGPAAEIAIAAAEQALIDPAGRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC APSAGTDTNANADAAGQPARLDEAAGRERALADALAQLHCVATAFAQADWADARGFRLRR CCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VACWSSVCALPETDAENGRTRIAAPSASIVGAAKSIDGDGEPVAAVRFAEAHAQAFPLWL HHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH DLQRIAARALARAGGDGADARREVETAVRALLARLPGLDALTFADGTPFADDATRAWLGE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHH LGAPVVAADAVSPSSLPLSPRPSPPERSSPMAGEPARAPGDACGASADDAVDRACAFAAS CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC GQLDLALHAIQHAIDRATSAEQRLRARVRLCELARDHWPHEVPEAFARGVIEPIRRHDLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCE AWNPELALDGLSAAYALLIRRDRESAHARTVLDEIASVDAARAMRLST EECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA