| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722505
Identifier: 53722505
GI number: 53722505
Start: 2023034
End: 2024068
Strand: Reverse
Name: 53722505
Synonym: BPSS1483
Alternate gene names: NA
Gene position: 2024068-2023034 (Counterclockwise)
Preceding gene: 53722515
Following gene: 53722498
Centisome position: 63.79
GC content: 73.82
Gene sequence:
>1035_bases ATGCCTACTACCGTATCCGCACCGGAAACGCTGTCCGAAACGCGCACGCAGACCCGCGAGCTGTTGCTGCAGACTGCGCT GTCGATGCTCGAACAAGGCTGGTTTCCATCGATCACCGAGCTCGCGAACGCATCCGGCGTGTCGCGCGCCACCGCTTACC GCTACTTCCCGTCGCAGGCGGCGCTCGTGAGCACCGTCGTCGACGAGAGCCTCGGGCCGGTGCTGCAATGGCAGCCGACG TCGACGTCGGTCGAGGCGCGCGTGAACGAGCTGCTCGACTTCGCGTATCCGCGCATGGAGCAGCACGAGGGCGCGTTGCG CGCCGCGCTGCAGGTGGCGCTGCATCAGTGGGCGAACGAGCGTGCGCGGCGCGCGCAGGACGAGCCGAAGTACCGGCGCG GCAACCGCCGGCGGCTGCTCACGCTCGCCGTCGAGCCGATGGTGCGGGCGGGCGTCGATCCGGCGGTGGCCGAGCGGCTC GCGCAGGCACTGTCGTTGCTCTACGGCACCGAGGCGATGGTCGTGCTGAAGGATATCTGGGGGCTCGACTTCCGGCAGTT CATGAACGTCATCAAGTGGATGAGCTCGGCGCTCGTGCGGGCGACGCTCGCGCAAGCGGGCGGGGCGGCGGGAGCGGGCG GCGGCGCAGAGGCGGGGGCGGGCGGCGCTGGCGTGGCTGAAGGTGCGGCTCAAGGCGCGGCGGAAGGCACGGCTGAAGGC ACGGCGGCGGCTGGGGGCGGCGCGGCGCGCGAGCAAGTCGCGCGCGATGCCGGCGCGGCGCAACACGCTTCGCCGGACGG CGACCCCGCCGCCGCGGGCCGCGCCGCCGCCTCGGACGGCCCCGCGGCCGGGCACGGCGACGCGCCAGCCGCGGGCGCCG CGGATGCCGCGGATGCCGCGGATCCGGCCGGCGACGCAGCCGGCGAGCGCCCCGAGGATCGCGCGTCCGCTTCGCCCACG TCTTCCATCACTCCGTCCTCTTCGTCCACTCCGTCCGCTTCGCCCGCCTCGGGCGACGACGGGCGCGATGCCTGA
Upstream 100 bases:
>100_bases CGCCAATCGTTCGTTTGTCGCACGATGTACCGCGATTCGATTCCACGGTAACTTTAACACAGATGAGACGGCCGTCTCAG CGGTCGTCCTCACAGGACAC
Downstream 100 bases:
>100_bases GTAGCCGCCTCGGTGCAGCGCCCGCCCGTCGCGGATAAGGCCGGCGGGGCGCACCGCGCATCGCCGCGCGATGCGCGGCC GCGCCGCGCGCGTCCGGTTC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; TetR Family Regulatory Protein; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Tetr-Family Regulatory Protein; Transcriptional Regulator TetR-Family
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MPTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQAALVSTVVDESLGPVLQWQPT STSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANERARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERL AQALSLLYGTEAMVVLKDIWGLDFRQFMNVIKWMSSALVRATLAQAGGAAGAGGGAEAGAGGAGVAEGAAQGAAEGTAEG TAAAGGGAAREQVARDAGAAQHASPDGDPAAAGRAAASDGPAAGHGDAPAAGAADAADAADPAGDAAGERPEDRASASPT SSITPSSSSTPSASPASGDDGRDA
Sequences:
>Translated_344_residues MPTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQAALVSTVVDESLGPVLQWQPT STSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANERARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERL AQALSLLYGTEAMVVLKDIWGLDFRQFMNVIKWMSSALVRATLAQAGGAAGAGGGAEAGAGGAGVAEGAAQGAAEGTAEG TAAAGGGAAREQVARDAGAAQHASPDGDPAAAGRAAASDGPAAGHGDAPAAGAADAADAADPAGDAAGERPEDRASASPT SSITPSSSSTPSASPASGDDGRDA >Mature_343_residues PTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQAALVSTVVDESLGPVLQWQPTS TSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANERARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERLA QALSLLYGTEAMVVLKDIWGLDFRQFMNVIKWMSSALVRATLAQAGGAAGAGGGAEAGAGGAGVAEGAAQGAAEGTAEGT AAAGGGAAREQVARDAGAAQHASPDGDPAAAGRAAASDGPAAGHGDAPAAGAADAADAADPAGDAAGERPEDRASASPTS SITPSSSSTPSASPASGDDGRDA
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34955; Mature: 34823
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHCCCHH ALVSTVVDESLGPVLQWQPTSTSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANE HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERLAQALSLLYGTEAMVVLKDIW HHHHCCCCHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH GLDFRQFMNVIKWMSSALVRATLAQAGGAAGAGGGAEAGAGGAGVAEGAAQGAAEGTAEG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC TAAAGGGAAREQVARDAGAAQHASPDGDPAAAGRAAASDGPAAGHGDAPAAGAADAADAA CCCCCCHHHHHHHHHHHCCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCC DPAGDAAGERPEDRASASPTSSITPSSSSTPSASPASGDDGRDA CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHCCCHH ALVSTVVDESLGPVLQWQPTSTSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANE HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERLAQALSLLYGTEAMVVLKDIW HHHHCCCCHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH GLDFRQFMNVIKWMSSALVRATLAQAGGAAGAGGGAEAGAGGAGVAEGAAQGAAEGTAEG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC TAAAGGGAAREQVARDAGAAQHASPDGDPAAAGRAAASDGPAAGHGDAPAAGAADAADAA CCCCCCHHHHHHHHHHHCCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCC DPAGDAAGERPEDRASASPTSSITPSSSSTPSASPASGDDGRDA CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA