Definition Burkholderia pseudomallei K96243 chromosome 2, complete sequence.
Accession NC_006351
Length 3,173,005

Click here to switch to the map view.

The map label for this gene is 53722505

Identifier: 53722505

GI number: 53722505

Start: 2023034

End: 2024068

Strand: Reverse

Name: 53722505

Synonym: BPSS1483

Alternate gene names: NA

Gene position: 2024068-2023034 (Counterclockwise)

Preceding gene: 53722515

Following gene: 53722498

Centisome position: 63.79

GC content: 73.82

Gene sequence:

>1035_bases
ATGCCTACTACCGTATCCGCACCGGAAACGCTGTCCGAAACGCGCACGCAGACCCGCGAGCTGTTGCTGCAGACTGCGCT
GTCGATGCTCGAACAAGGCTGGTTTCCATCGATCACCGAGCTCGCGAACGCATCCGGCGTGTCGCGCGCCACCGCTTACC
GCTACTTCCCGTCGCAGGCGGCGCTCGTGAGCACCGTCGTCGACGAGAGCCTCGGGCCGGTGCTGCAATGGCAGCCGACG
TCGACGTCGGTCGAGGCGCGCGTGAACGAGCTGCTCGACTTCGCGTATCCGCGCATGGAGCAGCACGAGGGCGCGTTGCG
CGCCGCGCTGCAGGTGGCGCTGCATCAGTGGGCGAACGAGCGTGCGCGGCGCGCGCAGGACGAGCCGAAGTACCGGCGCG
GCAACCGCCGGCGGCTGCTCACGCTCGCCGTCGAGCCGATGGTGCGGGCGGGCGTCGATCCGGCGGTGGCCGAGCGGCTC
GCGCAGGCACTGTCGTTGCTCTACGGCACCGAGGCGATGGTCGTGCTGAAGGATATCTGGGGGCTCGACTTCCGGCAGTT
CATGAACGTCATCAAGTGGATGAGCTCGGCGCTCGTGCGGGCGACGCTCGCGCAAGCGGGCGGGGCGGCGGGAGCGGGCG
GCGGCGCAGAGGCGGGGGCGGGCGGCGCTGGCGTGGCTGAAGGTGCGGCTCAAGGCGCGGCGGAAGGCACGGCTGAAGGC
ACGGCGGCGGCTGGGGGCGGCGCGGCGCGCGAGCAAGTCGCGCGCGATGCCGGCGCGGCGCAACACGCTTCGCCGGACGG
CGACCCCGCCGCCGCGGGCCGCGCCGCCGCCTCGGACGGCCCCGCGGCCGGGCACGGCGACGCGCCAGCCGCGGGCGCCG
CGGATGCCGCGGATGCCGCGGATCCGGCCGGCGACGCAGCCGGCGAGCGCCCCGAGGATCGCGCGTCCGCTTCGCCCACG
TCTTCCATCACTCCGTCCTCTTCGTCCACTCCGTCCGCTTCGCCCGCCTCGGGCGACGACGGGCGCGATGCCTGA

Upstream 100 bases:

>100_bases
CGCCAATCGTTCGTTTGTCGCACGATGTACCGCGATTCGATTCCACGGTAACTTTAACACAGATGAGACGGCCGTCTCAG
CGGTCGTCCTCACAGGACAC

Downstream 100 bases:

>100_bases
GTAGCCGCCTCGGTGCAGCGCCCGCCCGTCGCGGATAAGGCCGGCGGGGCGCACCGCGCATCGCCGCGCGATGCGCGGCC
GCGCCGCGCGCGTCCGGTTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR Family Regulatory Protein; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Tetr-Family Regulatory Protein; Transcriptional Regulator TetR-Family

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MPTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQAALVSTVVDESLGPVLQWQPT
STSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANERARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERL
AQALSLLYGTEAMVVLKDIWGLDFRQFMNVIKWMSSALVRATLAQAGGAAGAGGGAEAGAGGAGVAEGAAQGAAEGTAEG
TAAAGGGAAREQVARDAGAAQHASPDGDPAAAGRAAASDGPAAGHGDAPAAGAADAADAADPAGDAAGERPEDRASASPT
SSITPSSSSTPSASPASGDDGRDA

Sequences:

>Translated_344_residues
MPTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQAALVSTVVDESLGPVLQWQPT
STSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANERARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERL
AQALSLLYGTEAMVVLKDIWGLDFRQFMNVIKWMSSALVRATLAQAGGAAGAGGGAEAGAGGAGVAEGAAQGAAEGTAEG
TAAAGGGAAREQVARDAGAAQHASPDGDPAAAGRAAASDGPAAGHGDAPAAGAADAADAADPAGDAAGERPEDRASASPT
SSITPSSSSTPSASPASGDDGRDA
>Mature_343_residues
PTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQAALVSTVVDESLGPVLQWQPTS
TSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANERARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERLA
QALSLLYGTEAMVVLKDIWGLDFRQFMNVIKWMSSALVRATLAQAGGAAGAGGGAEAGAGGAGVAEGAAQGAAEGTAEGT
AAAGGGAAREQVARDAGAAQHASPDGDPAAAGRAAASDGPAAGHGDAPAAGAADAADAADPAGDAAGERPEDRASASPTS
SITPSSSSTPSASPASGDDGRDA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34955; Mature: 34823

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHCCCHH
ALVSTVVDESLGPVLQWQPTSTSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANE
HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERLAQALSLLYGTEAMVVLKDIW
HHHHCCCCHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
GLDFRQFMNVIKWMSSALVRATLAQAGGAAGAGGGAEAGAGGAGVAEGAAQGAAEGTAEG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
TAAAGGGAAREQVARDAGAAQHASPDGDPAAAGRAAASDGPAAGHGDAPAAGAADAADAA
CCCCCCHHHHHHHHHHHCCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCC
DPAGDAAGERPEDRASASPTSSITPSSSSTPSASPASGDDGRDA
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHCCCHH
ALVSTVVDESLGPVLQWQPTSTSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANE
HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERLAQALSLLYGTEAMVVLKDIW
HHHHCCCCHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
GLDFRQFMNVIKWMSSALVRATLAQAGGAAGAGGGAEAGAGGAGVAEGAAQGAAEGTAEG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
TAAAGGGAAREQVARDAGAAQHASPDGDPAAAGRAAASDGPAAGHGDAPAAGAADAADAA
CCCCCCHHHHHHHHHHHCCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCC
DPAGDAAGERPEDRASASPTSSITPSSSSTPSASPASGDDGRDA
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA