| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722416
Identifier: 53722416
GI number: 53722416
Start: 1901932
End: 1903338
Strand: Reverse
Name: 53722416
Synonym: BPSS1389
Alternate gene names: NA
Gene position: 1903338-1901932 (Counterclockwise)
Preceding gene: 53722417
Following gene: 53722415
Centisome position: 59.99
GC content: 66.17
Gene sequence:
>1407_bases TTGACTTTGACGGAGGCGGAAATGAGCGTAGGCGTGGTAAATCGCAATTGCGTTGTTGTCGAACTGGGCGGAAGGCCGGA CGGTGCGGATGCGCGGTCGCAAATCGCGGGCCTGGATCAGCAGATCATGGGGCTGCTCCGGCAACAGTTGCAGAAGCGCG ACGGCGGCACCGGCGGCGGCGCCCATGACGCGATGACCGCGCAATCGGCCGCGGGCGCGCTCGGCAGCTACATGAGCCAG AACGGGATCAGCACGGTCGATCCGGATAAGCTGTACCAGCTCGCGATGAACCCGTCTTCGGGAACGCCTGAGGATGTGTC GAAGGCCGCGAAGTTCATGCTCGATCACCCGGATATTTTCCGCAAGCTCGAAACCCATGACGTCGCCGGCGCCGACGGCA TCTCGGGGGTCGGCAATTTTCAATGGGCGGCGCAAGGCGGGCTTGATTCGGATTCGGCCGCGCCGACGGATGGCACGGGC TCAGCCGAGAAGGTCGGCCTTCGCGGCGACGCGCAGGGCGAAGCTGCACCGATGACCGCGCAATCGGCAGCGGGTGCGCT CGGCAGCTACATGAGCCAGAACGGGATCAGCACGGTCGATCCGAACAGGCTGTATCAGCTCGCGATGAATCCGCCTTCGG GAACGCCTGAGGATGTGTCGAAGGCCGCGAAGTTCATGCTTGCCAATCCGGATGTTTTCCGGCAACTCGAAACGCATGAC GTCGCCGGCGCCGACGGCATCTCCGGCGTCGCGAACTTCCAATGGGCGGCGCAAGGCGGGCTGGATTCGAGTTCGGCTGC GCAGAGCGGCGATACGGGCTCGACGGCGAACGCCGAGCTTGGCGGCAAGGCGGAAAGCAGCGGCGGTGCGGACGCGGCTG GCGGCGACGCGCAGATCAATGATGCACCGATGACCGCGCAATCGGCAGCGGGTGCGCTCGGCAGCTACATGAGCCAGAAC GGGATCAGCACGGTCGATCCGAACAGGCTGTATCAGCTCGCGATGAATCCGCCTTCGGGAACGCCTGAGGACGTGTCGAA GGCCGCGAAGTTCATGCTTGCCGACCCGGATGTGTTCCGGCAACTCGAAACGCACGACGCCGCCGGCGCCGACGGCATCT CCGGCGTCGCGAACTTCCAATGGGCGGCGCAAGGCGGGCTGGATTCCTTCGCGACCGCCGACGCGAAGCCGACTGCCGGC GCGACCTCTGCTGGCGCATCGAGCGTGGCCGCCGGCCCGACCTTGACCGCCGGCGCCAAAGCGGAGGCCGGCGCGCAGTC GGATGGCCTGCAGGGCGCTATCGCGGCGATGAACGGTGTCGTCGAGTCGGCCATGAAAGCGCAGGCGGCCGCCAGCACGA TCTCGGTTCCTGACTCGACGGACTCGGCTTCCAACGCCGATGCGTAG
Upstream 100 bases:
>100_bases GCGTTTCGGATTGACGGGCCCGTCGGCGCCGCATCCTGACTAGTATTTGTCTCAGTCGCAAGAGCGGTATCGCGGTTGGG TTGGCTGAACGGTTGATGCG
Downstream 100 bases:
>100_bases CCGTGCTGTAGAAGGGTGAAACAGGCGTAGGCGGGCACGCGCGCATAGCGCCGGGGTTCGCCGGTGCCTTGCTTCCCGAC GACGTCGATTCGGGGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MTLTEAEMSVGVVNRNCVVVELGGRPDGADARSQIAGLDQQIMGLLRQQLQKRDGGTGGGAHDAMTAQSAAGALGSYMSQ NGISTVDPDKLYQLAMNPSSGTPEDVSKAAKFMLDHPDIFRKLETHDVAGADGISGVGNFQWAAQGGLDSDSAAPTDGTG SAEKVGLRGDAQGEAAPMTAQSAAGALGSYMSQNGISTVDPNRLYQLAMNPPSGTPEDVSKAAKFMLANPDVFRQLETHD VAGADGISGVANFQWAAQGGLDSSSAAQSGDTGSTANAELGGKAESSGGADAAGGDAQINDAPMTAQSAAGALGSYMSQN GISTVDPNRLYQLAMNPPSGTPEDVSKAAKFMLADPDVFRQLETHDAAGADGISGVANFQWAAQGGLDSFATADAKPTAG ATSAGASSVAAGPTLTAGAKAEAGAQSDGLQGAIAAMNGVVESAMKAQAAASTISVPDSTDSASNADA
Sequences:
>Translated_468_residues MTLTEAEMSVGVVNRNCVVVELGGRPDGADARSQIAGLDQQIMGLLRQQLQKRDGGTGGGAHDAMTAQSAAGALGSYMSQ NGISTVDPDKLYQLAMNPSSGTPEDVSKAAKFMLDHPDIFRKLETHDVAGADGISGVGNFQWAAQGGLDSDSAAPTDGTG SAEKVGLRGDAQGEAAPMTAQSAAGALGSYMSQNGISTVDPNRLYQLAMNPPSGTPEDVSKAAKFMLANPDVFRQLETHD VAGADGISGVANFQWAAQGGLDSSSAAQSGDTGSTANAELGGKAESSGGADAAGGDAQINDAPMTAQSAAGALGSYMSQN GISTVDPNRLYQLAMNPPSGTPEDVSKAAKFMLADPDVFRQLETHDAAGADGISGVANFQWAAQGGLDSFATADAKPTAG ATSAGASSVAAGPTLTAGAKAEAGAQSDGLQGAIAAMNGVVESAMKAQAAASTISVPDSTDSASNADA >Mature_467_residues TLTEAEMSVGVVNRNCVVVELGGRPDGADARSQIAGLDQQIMGLLRQQLQKRDGGTGGGAHDAMTAQSAAGALGSYMSQN GISTVDPDKLYQLAMNPSSGTPEDVSKAAKFMLDHPDIFRKLETHDVAGADGISGVGNFQWAAQGGLDSDSAAPTDGTGS AEKVGLRGDAQGEAAPMTAQSAAGALGSYMSQNGISTVDPNRLYQLAMNPPSGTPEDVSKAAKFMLANPDVFRQLETHDV AGADGISGVANFQWAAQGGLDSSSAAQSGDTGSTANAELGGKAESSGGADAAGGDAQINDAPMTAQSAAGALGSYMSQNG ISTVDPNRLYQLAMNPPSGTPEDVSKAAKFMLADPDVFRQLETHDAAGADGISGVANFQWAAQGGLDSFATADAKPTAGA TSAGASSVAAGPTLTAGAKAEAGAQSDGLQGAIAAMNGVVESAMKAQAAASTISVPDSTDSASNADA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46596; Mature: 46465
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTEAEMSVGVVNRNCVVVELGGRPDGADARSQIAGLDQQIMGLLRQQLQKRDGGTGGG CCCCCCHHEEEEECCCEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC AHDAMTAQSAAGALGSYMSQNGISTVDPDKLYQLAMNPSSGTPEDVSKAAKFMLDHPDIF CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCCCCCHHHHHHHHHHHCCCHHHH RKLETHDVAGADGISGVGNFQWAAQGGLDSDSAAPTDGTGSAEKVGLRGDAQGEAAPMTA HHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCH QSAAGALGSYMSQNGISTVDPNRLYQLAMNPPSGTPEDVSKAAKFMLANPDVFRQLETHD HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHC VAGADGISGVANFQWAAQGGLDSSSAAQSGDTGSTANAELGGKAESSGGADAAGGDAQIN CCCCCCCCCCCCCEEHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DAPMTAQSAAGALGSYMSQNGISTVDPNRLYQLAMNPPSGTPEDVSKAAKFMLADPDVFR CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHH QLETHDAAGADGISGVANFQWAAQGGLDSFATADAKPTAGATSAGASSVAAGPTLTAGAK HHHHHCCCCCCCCCCCCCCEEHHCCCCCHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCC AEAGAQSDGLQGAIAAMNGVVESAMKAQAAASTISVPDSTDSASNADA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC >Mature Secondary Structure TLTEAEMSVGVVNRNCVVVELGGRPDGADARSQIAGLDQQIMGLLRQQLQKRDGGTGGG CCCCCHHEEEEECCCEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC AHDAMTAQSAAGALGSYMSQNGISTVDPDKLYQLAMNPSSGTPEDVSKAAKFMLDHPDIF CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCCCCCHHHHHHHHHHHCCCHHHH RKLETHDVAGADGISGVGNFQWAAQGGLDSDSAAPTDGTGSAEKVGLRGDAQGEAAPMTA HHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCH QSAAGALGSYMSQNGISTVDPNRLYQLAMNPPSGTPEDVSKAAKFMLANPDVFRQLETHD HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHC VAGADGISGVANFQWAAQGGLDSSSAAQSGDTGSTANAELGGKAESSGGADAAGGDAQIN CCCCCCCCCCCCCEEHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DAPMTAQSAAGALGSYMSQNGISTVDPNRLYQLAMNPPSGTPEDVSKAAKFMLADPDVFR CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHH QLETHDAAGADGISGVANFQWAAQGGLDSFATADAKPTAGATSAGASSVAAGPTLTAGAK HHHHHCCCCCCCCCCCCCCEEHHCCCCCHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCC AEAGAQSDGLQGAIAAMNGVVESAMKAQAAASTISVPDSTDSASNADA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA