| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is hrpK [H]
Identifier: 53722415
GI number: 53722415
Start: 1899846
End: 1901654
Strand: Reverse
Name: hrpK [H]
Synonym: BPSS1388
Alternate gene names: 53722415
Gene position: 1901654-1899846 (Counterclockwise)
Preceding gene: 53722416
Following gene: 53722414
Centisome position: 59.93
GC content: 63.63
Gene sequence:
>1809_bases ATGGCTATCTCACCGACTATTGCGACGAATCGGCAGGTCGTCGGTTCGGTCGGCTCGGAAAACGTGCCGGGCCCGGCCGC CGAGGCGCTGCAAAGCGTCGAGTCGCAGCTTCACCAACTGATGGCGCGTCAGTTGCAGGGGGGTGTCGCGATGGCGCAGC GGCAGGGTTCCGGTATTCGTGCCGCGCAATATGCACCGCTCGACGACTACACCAGGATGTACGATCAGGCGGACCGGGAC CGATGGGCCGATCTTGCCGCGCTTGGCCAGGGCGTGTCGCTCGAGCGGCCGTTGGCCGCGATGCAAATTCTGTCCGGTGA GCGGCAGCCTTCCGCGGCGCAGACGGCGGCCGCGCTGCAGTTCGTCAACGACAATCCATCGCTGAAGACTGCGATGCAGA ACACCGGAGGGCTAAAGCCGGATGGCAGTGTCGATCCAGGCAAGGTTGCAGACCTATTGAAAGAGGTCGAGGCGAATCTC GCGAAAGCGGATGAAGACGTGAAGGCCTATCTGAACGATCATCCGGACGCCGATCGGGATGCGCTCGATACGGTTCGTGC GGCTGCCTTGCTGGAAGCCTATGAACCGATCGTCGGCCAATCGGCGGGGCATCAATCGAGCGGAAAGAACCACAGCTATT CCACCGGGGGCAAGAACAACGGCGGCGGCCTCACGACGAAGCAGCAGGTTGCCGATCTGCAGAATAACGGAGGCTTCAGT GCGGCGCTGAAAAGCGCCGCGAAAGCGTGGTCGACAAGCGGCGCGTTCGATAACCTCGATCGCGCCGGCGACGACAAGGC GACCGAGAAGGTCGACCAGATATTTTCGGCCAACAACCTGCACCACTTCATTACGAAGGACGCGCCGACCAGCGATGCGG CCGAGCATGCGTTCCTGGAGAAAGCGAGCCTCGAGAACATCACGGCCGGCACCGACATCAGCAAGCTCAATCAGGATATC TTCGCCAATCCGCAAGACTATTCCCCTCAGCAGAAAGCCGCCGTGATGGTCAAGCTGATGGAGACGCTGGTCGACGTGCA AGCAGGCGGCGCCGACAAGCTGCGCGATGTCACTGCAACGGTGTCCGCGCTGAAGCAGGACATCATGATGCTGGCAAACG ATCCCGAGACGAACGCCTATTTGCATCAAATGGTGCCGCCGGAGATGAGAGACCTCAACGCGACGTTCGAGCAGGCGGGC GGCCTTGAGGGAGATACCGGCGCGGCAGGCGATATGTCGGTTGCGGACAACGCGAACCGGGTTTCCGCCCGGAACATCGT CGATCAAACGAAAGACGCACTGGACGAAGCGGAGAAGGTCGCCAAGAGACTGGGCAAGTTGGGCAACGAAGGAGCCGGGG AGGCGACGGATGCTACGCAGAGCATCGCGGACGGCGCGGAAACCGCGGCGGACGGCGCGGTGCAAGGCGGCGTGGAGGAG GTGGGCGGGGCGGCCGCAAGCGCGGTCGACGGAGCCGAAGGTGCGATAACGGGCGTCGCAGACGGCGTGGAAGCGGCCGA CGGCGCGGTGACGGGCGTTGCGGAAGGCGTGGAAGGCGCATTGGCCGGCACCGAAGGAGCGGTGGTCGGCGCGGAGGCCG GTGCCGGCGTTGCCGAGGGCGTGATGGGGGCCGTTGCGGGAGGAATGGCTGCGGCAGCGCCGGTGCTTGCGGTGGGTGCC GCGATTGCCGGCATCGCAGGTATCGTCCTGGCGATCGTGGAAGCCGTGAAAAAGGCGCAGAATCGGAAGGCATTTGCAGA GAACGTCAATCCCACGCTCAATCAATTCGGCATTCCGTTGCCGACATGA
Upstream 100 bases:
>100_bases TGCACCGCGCATGAGCGCGTGGCAAGCACGAAGCATGCGCGAGCGGGTGATCGGCATTCAGGCGCAAACGGGCGCCAACA TATAAGGATACCTACGTTTA
Downstream 100 bases:
>100_bases CGACGCAAGCCGCAGGAGCATGCAATGCGCCGAGTGCTGCTGGATCGTAGCGATGAAGTCATGCGCTTCGTTGCCGACAG GACTGGAGAAAGCCGCTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MAISPTIATNRQVVGSVGSENVPGPAAEALQSVESQLHQLMARQLQGGVAMAQRQGSGIRAAQYAPLDDYTRMYDQADRD RWADLAALGQGVSLERPLAAMQILSGERQPSAAQTAAALQFVNDNPSLKTAMQNTGGLKPDGSVDPGKVADLLKEVEANL AKADEDVKAYLNDHPDADRDALDTVRAAALLEAYEPIVGQSAGHQSSGKNHSYSTGGKNNGGGLTTKQQVADLQNNGGFS AALKSAAKAWSTSGAFDNLDRAGDDKATEKVDQIFSANNLHHFITKDAPTSDAAEHAFLEKASLENITAGTDISKLNQDI FANPQDYSPQQKAAVMVKLMETLVDVQAGGADKLRDVTATVSALKQDIMMLANDPETNAYLHQMVPPEMRDLNATFEQAG GLEGDTGAAGDMSVADNANRVSARNIVDQTKDALDEAEKVAKRLGKLGNEGAGEATDATQSIADGAETAADGAVQGGVEE VGGAAASAVDGAEGAITGVADGVEAADGAVTGVAEGVEGALAGTEGAVVGAEAGAGVAEGVMGAVAGGMAAAAPVLAVGA AIAGIAGIVLAIVEAVKKAQNRKAFAENVNPTLNQFGIPLPT
Sequences:
>Translated_602_residues MAISPTIATNRQVVGSVGSENVPGPAAEALQSVESQLHQLMARQLQGGVAMAQRQGSGIRAAQYAPLDDYTRMYDQADRD RWADLAALGQGVSLERPLAAMQILSGERQPSAAQTAAALQFVNDNPSLKTAMQNTGGLKPDGSVDPGKVADLLKEVEANL AKADEDVKAYLNDHPDADRDALDTVRAAALLEAYEPIVGQSAGHQSSGKNHSYSTGGKNNGGGLTTKQQVADLQNNGGFS AALKSAAKAWSTSGAFDNLDRAGDDKATEKVDQIFSANNLHHFITKDAPTSDAAEHAFLEKASLENITAGTDISKLNQDI FANPQDYSPQQKAAVMVKLMETLVDVQAGGADKLRDVTATVSALKQDIMMLANDPETNAYLHQMVPPEMRDLNATFEQAG GLEGDTGAAGDMSVADNANRVSARNIVDQTKDALDEAEKVAKRLGKLGNEGAGEATDATQSIADGAETAADGAVQGGVEE VGGAAASAVDGAEGAITGVADGVEAADGAVTGVAEGVEGALAGTEGAVVGAEAGAGVAEGVMGAVAGGMAAAAPVLAVGA AIAGIAGIVLAIVEAVKKAQNRKAFAENVNPTLNQFGIPLPT >Mature_601_residues AISPTIATNRQVVGSVGSENVPGPAAEALQSVESQLHQLMARQLQGGVAMAQRQGSGIRAAQYAPLDDYTRMYDQADRDR WADLAALGQGVSLERPLAAMQILSGERQPSAAQTAAALQFVNDNPSLKTAMQNTGGLKPDGSVDPGKVADLLKEVEANLA KADEDVKAYLNDHPDADRDALDTVRAAALLEAYEPIVGQSAGHQSSGKNHSYSTGGKNNGGGLTTKQQVADLQNNGGFSA ALKSAAKAWSTSGAFDNLDRAGDDKATEKVDQIFSANNLHHFITKDAPTSDAAEHAFLEKASLENITAGTDISKLNQDIF ANPQDYSPQQKAAVMVKLMETLVDVQAGGADKLRDVTATVSALKQDIMMLANDPETNAYLHQMVPPEMRDLNATFEQAGG LEGDTGAAGDMSVADNANRVSARNIVDQTKDALDEAEKVAKRLGKLGNEGAGEATDATQSIADGAETAADGAVQGGVEEV GGAAASAVDGAEGAITGVADGVEAADGAVTGVAEGVEGALAGTEGAVVGAEAGAGVAEGVMGAVAGGMAAAAPVLAVGAA IAGIAGIVLAIVEAVKKAQNRKAFAENVNPTLNQFGIPLPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61355; Mature: 61224
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISPTIATNRQVVGSVGSENVPGPAAEALQSVESQLHQLMARQLQGGVAMAQRQGSGIR CCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCC AAQYAPLDDYTRMYDQADRDRWADLAALGQGVSLERPLAAMQILSGERQPSAAQTAAALQ HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH FVNDNPSLKTAMQNTGGLKPDGSVDPGKVADLLKEVEANLAKADEDVKAYLNDHPDADRD HHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHH ALDTVRAAALLEAYEPIVGQSAGHQSSGKNHSYSTGGKNNGGGLTTKQQVADLQNNGGFS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHH AALKSAAKAWSTSGAFDNLDRAGDDKATEKVDQIFSANNLHHFITKDAPTSDAAEHAFLE HHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHH KASLENITAGTDISKLNQDIFANPQDYSPQQKAAVMVKLMETLVDVQAGGADKLRDVTAT HHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VSALKQDIMMLANDPETNAYLHQMVPPEMRDLNATFEQAGGLEGDTGAAGDMSVADNANR HHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH VSARNIVDQTKDALDEAEKVAKRLGKLGNEGAGEATDATQSIADGAETAADGAVQGGVEE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH VGGAAASAVDGAEGAITGVADGVEAADGAVTGVAEGVEGALAGTEGAVVGAEAGAGVAEG HCCHHHHHCCCCCCCHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHH VMGAVAGGMAAAAPVLAVGAAIAGIAGIVLAIVEAVKKAQNRKAFAENVNPTLNQFGIPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC PT CC >Mature Secondary Structure AISPTIATNRQVVGSVGSENVPGPAAEALQSVESQLHQLMARQLQGGVAMAQRQGSGIR CCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCC AAQYAPLDDYTRMYDQADRDRWADLAALGQGVSLERPLAAMQILSGERQPSAAQTAAALQ HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH FVNDNPSLKTAMQNTGGLKPDGSVDPGKVADLLKEVEANLAKADEDVKAYLNDHPDADRD HHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHH ALDTVRAAALLEAYEPIVGQSAGHQSSGKNHSYSTGGKNNGGGLTTKQQVADLQNNGGFS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHH AALKSAAKAWSTSGAFDNLDRAGDDKATEKVDQIFSANNLHHFITKDAPTSDAAEHAFLE HHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHH KASLENITAGTDISKLNQDIFANPQDYSPQQKAAVMVKLMETLVDVQAGGADKLRDVTAT HHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VSALKQDIMMLANDPETNAYLHQMVPPEMRDLNATFEQAGGLEGDTGAAGDMSVADNANR HHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH VSARNIVDQTKDALDEAEKVAKRLGKLGNEGAGEATDATQSIADGAETAADGAVQGGVEE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH VGGAAASAVDGAEGAITGVADGVEAADGAVTGVAEGVEGALAGTEGAVVGAEAGAGVAEG HCCHHHHHCCCCCCCHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHH VMGAVAGGMAAAAPVLAVGAAIAGIAGIVLAIVEAVKKAQNRKAFAENVNPTLNQFGIPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC PT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8106313; 8274770 [H]